Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,405,469 T→C W76R (TGG→CGG)  b3258 → sodium/pantothenate symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,405,4690TC99.3% 461.1 / NA 148W76R (TGG→CGG) b3258sodium/pantothenate symporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (46/101);  minor base G (0/1);  total (46/102)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 193 total aligned reads displayed.

ATTGTGCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCTGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGCGCCGCTAC  >  NC_000913/3405379‑3405558
                                                                                          |                                                                                         
aTTGTGCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGGCAGGGGCGTCTTTTTAATACGGgctgggccgg                                                                                         >  2:3296772/1‑93 (MQ=255)
  tgtgCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGt                                                                                       <  2:249024/93‑1 (MQ=255)
   gtgCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTa                                                                                      <  2:3076548/93‑1 (MQ=255)
   gtgCTGCCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTa                                                                                      <  2:45460/93‑1 (MQ=255)
    tgCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGGGCTGCGTATAAAAACGGGCTGGGCCGGGAAt                                                                                     >  1:3925997/1‑93 (MQ=255)
    tgCTGGCGATGACGCTAACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTAt                                                                                     <  1:4426632/93‑1 (MQ=255)
     gCTGGCGATGACGCTCTCCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTAtt                                                                                    <  2:4245457/93‑1 (MQ=255)
     gCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTAtt                                                                                    <  1:4610859/93‑1 (MQ=255)
      cTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTg                                                                                   >  2:3014904/1‑93 (MQ=255)
       tGGCGATCACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGc                                                                                  <  1:3290342/93‑1 (MQ=255)
        ggCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCt                                                                                 >  1:1967593/1‑93 (MQ=255)
         gCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGTCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTg                                                                                <  2:4305745/93‑1 (MQ=255)
          cGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTgg                                                                               <  2:2519889/93‑1 (MQ=255)
             tGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCga                                                                            <  2:627985/93‑1 (MQ=255)
                   tCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCCGGAGCTGCTTATAAATACGGGCTGGGCCCGGGATTGCTGGCGGTGAtta                                                                      >  2:2410513/1‑92 (MQ=255)
                    cACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCa                                                                     <  2:4390448/93‑1 (MQ=255)
                    cACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCa                                                                     <  1:1140268/93‑1 (MQ=255)
                     aCCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGATGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAg                                                                    <  1:471405/93‑1 (MQ=255)
                         cgACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTc                                                                <  2:1964364/93‑1 (MQ=255)
                          gACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTTTAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTcc                                                               >  1:646506/1‑93 (MQ=255)
                          gACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTcc                                                               <  2:1103908/93‑1 (MQ=255)
                          caCCTATATCAGTGCCAGTTCGTTTAGCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTcc                                                               <  1:3102546/92‑1 (MQ=255)
                           aCCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCt                                                              >  1:2502062/1‑93 (MQ=255)
                            ccTATAACAGTGCCAGTTCGTTTATCGGCGGGCCCGGAGCTGCTTATAAATACGGGCTGGGGCAGGGATTACTGGCGATGATTAAGCTTTCtc                                                             >  2:3903173/1‑92 (MQ=255)
                             cTATATCAGTGCCAGTTCGTTTATCGGCGGGCCCGGAGCTGGTTATAAATATGGGCCGGGTCGGGTGATGATGGCGCGGATTAAGCTTCCTGc                                                            >  2:136972/1‑93 (MQ=255)
                             cTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGc                                                            <  2:44875/93‑1 (MQ=255)
                              tataTCAGTGCTAGTTCGTTTATCGGCGGGCCAGGATCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCa                                                           <  1:297532/93‑1 (MQ=255)
                              tataTCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCa                                                           <  2:1734197/93‑1 (MQ=255)
                              tataTCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCa                                                           >  2:2381911/1‑93 (MQ=255)
                                tatCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGt                                                         >  1:3726050/1‑93 (MQ=255)
                                 atCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTc                                                        <  2:2786379/93‑1 (MQ=255)
                                 atCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTc                                                        <  1:2911268/93‑1 (MQ=255)
                                    aGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTgg                                                     <  1:1643247/93‑1 (MQ=255)
                                     gTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGGCGGGGATTGCTTGCGATGATTCAGCTTCCCGCCGTCTTGc                                                    >  2:879874/1‑93 (MQ=255)
                                     gTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGc                                                    <  1:3206123/93‑1 (MQ=255)
                                      tGCCAGTTCGTTTATCGGCTGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCt                                                   <  2:1891885/93‑1 (MQ=255)
                                      tGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCt                                                   <  1:1182411/93‑1 (MQ=255)
                                      tGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTTGCGATGATTCAGCTTCCTGCAGTCTGGCt                                                   >  1:1890735/1‑93 (MQ=255)
                                       gCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGAtt                                                  <  1:3862116/93‑1 (MQ=255)
                                        ccAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCttt                                                 <  1:3975001/93‑1 (MQ=255)
                                         cAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTc                                                <  2:4285064/93‑1 (MQ=255)
                                          aGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCa                                               <  2:3830498/93‑1 (MQ=255)
                                           gTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCAc                                              <  1:1489254/93‑1 (MQ=255)
                                            ttCGTTTATCGGCGGGCCAGGGGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTTGCTTTCACt                                             >  2:3680439/1‑93 (MQ=255)
                                             tCGTTTATCGGCGTGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTc                                            <  2:1385793/93‑1 (MQ=255)
                                             tCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTc                                            >  1:2084447/1‑93 (MQ=255)
                                             tCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTc                                            <  2:1158820/93‑1 (MQ=255)
                                                tttATCGGCGGGGCCGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGGTGATTTAGGTTTCTGCAGGCTGGGTTTCACCCggg                                         >  2:1891074/1‑92 (MQ=255)
                                                tttATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTTGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGGTTTCACTCGGt                                         >  2:3531587/1‑93 (MQ=255)
                                                tttATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGt                                         >  1:1592092/1‑93 (MQ=255)
                                                 ttATCGGCGGGCCCGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGGGATGATTCAGGTTTCTGTCGGCTGGCTTTCACTCggct                                        >  2:927308/1‑91 (MQ=255)
                                                 ttATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGGCGGGGATTGCTGGCGGTGATTCAGCTTCCTGCAGTCTGGCTTTTACTCggga                                        >  2:3369885/1‑91 (MQ=255)
                                                 ttATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTa                                        <  1:1723639/93‑1 (MQ=255)
                                                  tATCGGCGGGCCAGGGGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGGAt                                       >  2:2459365/1‑93 (MQ=255)
                                                  tATCGGCGGGCCAGGAGGTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTTCTGCAGTCTGGCTTTCACTCGGTAt                                       >  2:4274553/1‑93 (MQ=255)
                                                  tATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTAt                                       <  1:970132/93‑1 (MQ=255)
                                                  tATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTAt                                       <  1:230790/93‑1 (MQ=255)
                                                  tATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTAt                                       >  2:4683158/1‑93 (MQ=255)
                                                  tATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTAt                                       >  1:2638576/1‑93 (MQ=255)
                                                   aTCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCCCGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTTGCTTTCACTCGGTAtt                                      >  2:3117956/1‑93 (MQ=255)
                                                     cggcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATtct                                    <  1:10736/93‑1 (MQ=255)
                                                      ggcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATtctc                                   <  2:2662751/93‑1 (MQ=255)
                                                      ggcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATtctc                                   >  1:217403/1‑93 (MQ=255)
                                                      ggcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATtctc                                   <  2:797131/93‑1 (MQ=255)
                                                       gcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCg                                  <  1:748875/93‑1 (MQ=255)
                                                       gcggGCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCg                                  <  2:610827/93‑1 (MQ=255)
                                                         gggCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCgga                                >  1:835354/1‑92 (MQ=255)
                                                          ggCCAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCa                               <  2:3997351/93‑1 (MQ=255)
                                                            ccAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaag                             >  1:1949236/1‑93 (MQ=255)
                                                            ccAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaag                             >  1:3611404/1‑93 (MQ=255)
                                                             cAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaaga                            >  2:3898135/1‑93 (MQ=255)
                                                             cAGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaaga                            <  1:1456002/93‑1 (MQ=255)
                                                             cAGGAGCTGCTTATAAATACGGGCTGGGCCGGGGATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCAGCaaga                            >  2:2100434/1‑93 (MQ=255)
                                                              aGGAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaagaa                           <  1:454094/93‑1 (MQ=255)
                                                              aGGAGCTGCTTATAAATACGGGCTGGGACGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaagaa                           <  2:2715703/93‑1 (MQ=255)
                                                               ggAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCaagaag                          <  1:3589551/93‑1 (MQ=255)
                                                               ggAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCCGGCCTTCACTCGGTATTGTCTGAaagaag                          >  1:1377477/1‑93 (MQ=255)
                                                                gAGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGt                         <  1:337628/93‑1 (MQ=255)
                                                                 aGCTGCTTATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGtt                        <  1:1259580/93‑1 (MQ=255)
                                                                       ttATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGAt                  >  1:1785996/1‑93 (MQ=255)
                                                                       ttATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGAt                  <  1:1469834/93‑1 (MQ=255)
                                                                       ttATAAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTATGCGAt                  >  1:4134623/1‑93 (MQ=255)
                                                                         ataAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTc                <  2:4472575/93‑1 (MQ=255)
                                                                         ataAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTc                >  2:692592/1‑93 (MQ=255)
                                                                         ataAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTc                <  1:3220585/93‑1 (MQ=255)
                                                                         ataAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTc                <  1:585271/93‑1 (MQ=255)
                                                                          taAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCt               >  2:3868640/1‑93 (MQ=255)
                                                                          taAATACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCt               <  1:711335/93‑1 (MQ=255)
                                                                           aaaTACGGGCTGGGCGGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCtt              <  1:3022299/93‑1 (MQ=255)
                                                                           aaaTACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCtt              <  2:316357/93‑1 (MQ=255)
                                                                             aTACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgc            >  1:2727460/1‑93 (MQ=255)
                                                                             aTACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgc            <  2:52436/93‑1 (MQ=255)
                                                                             aTACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgc            >  2:1465034/1‑93 (MQ=255)
                                                                              tACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgcg           >  1:2692935/1‑93 (MQ=255)
                                                                              tACGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgcg           >  1:3691136/1‑93 (MQ=255)
                                                                               aCGGGCTGGGCCGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTgcgc          >  2:2249967/1‑93 (MQ=255)
                                                                                   gctgggccggGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGcgccg      >  1:1010414/1‑93 (MQ=255)
                                                                                    ctgggccgggTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGcgccgc     <  2:3596708/93‑1 (MQ=255)
                                                                                    ctgggccgggTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGcgccgc     <  2:1267373/93‑1 (MQ=255)
                                                                                       ggccgggTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGCGCCGCTAc  <  1:2235657/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATTGTGCTGGCGATGACGCTCACCGCGACCTATATCAGTGCCAGTTCGTTTATCGGCGGGCCAGGAGCTGCTTATAAATACGGGCTGGGCTGGGTATTGCTGGCGATGATTCAGCTTCCTGCAGTCTGGCTTTCACTCGGTATTCTCGGCAAGAAGTTTGCGATTCTTGCGCGCCGCTAC  >  NC_000913/3405379‑3405558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: