BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,411,069	T→C	T12A (ACC→GCC)	envR ←	putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,411,069	0	T	C	100.0%	489.3 / NA	153	T12A (ACC→GCC)	envR	putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (15/138); total (15/138)

Only 100 of 154 total aligned reads displayed.

TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGTCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGG  >  NC_000913/3410979‑3411157

tAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCt                                                                                        <  1:2396097/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                      <  2:2219518/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                      <  2:3331886/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                      <  2:4191119/93‑1 (MQ=255)

  gcggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTc                                                                                      <  2:4385633/93‑1 (MQ=255)

   cggcgTCGGCAATGTCGTTGAGCGTCGTCTTACTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCa                                                                                     <  1:3937616/93‑1 (MQ=255)

    ggcgTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCag                                                                                    >  2:1007877/1‑93 (MQ=255)

       gTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGc                                                                                 >  2:572661/1‑93 (MQ=255)

       gTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGc                                                                                 <  2:2400186/93‑1 (MQ=255)

        tCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCt                                                                                <  2:3901573/93‑1 (MQ=255)

         tggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGAGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCtt                                                                               <  1:1469755/92‑1 (MQ=255)

         cGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCtt                                                                               <  2:4588669/93‑1 (MQ=255)

          ggCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTc                                                                              <  1:4449134/93‑1 (MQ=255)

           gCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCg                                                                             <  2:3391454/93‑1 (MQ=255)

           gCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCg                                                                             <  1:1362401/93‑1 (MQ=255)

              aTGTCGTTTAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCt                                                                          <  2:4125324/93‑1 (MQ=255)

              aTGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCt                                                                          <  1:3710399/93‑1 (MQ=255)

                ttCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCttt                                                                        <  2:3412600/92‑1 (MQ=255)

                gTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCttt                                                                        <  1:1230780/93‑1 (MQ=255)

                gTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCttt                                                                        <  2:3566809/93‑1 (MQ=255)

                 tCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTg                                                                       <  1:2498609/93‑1 (MQ=255)

                 tCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTg                                                                       <  1:4651289/93‑1 (MQ=255)

                 tCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTg                                                                       >  1:1362731/1‑93 (MQ=255)

                  cGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGGTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTgg                                                                      >  1:2951277/1‑93 (MQ=255)

                     tGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTc                                                                   <  1:3830011/93‑1 (MQ=255)

                     tGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTc                                                                   <  1:3716407/93‑1 (MQ=255)

                      gAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCt                                                                  >  1:4498983/1‑93 (MQ=255)

                      gAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCt                                                                  <  2:4640666/93‑1 (MQ=255)

                       aGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtt                                                                 <  2:153141/93‑1 (MQ=255)

                       aGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtt                                                                 <  2:2944912/93‑1 (MQ=255)

                       aGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtt                                                                 <  1:2661900/93‑1 (MQ=255)

                        gCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttt                                                                <  1:1561494/93‑1 (MQ=255)

                        gCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttt                                                                <  2:551950/93‑1 (MQ=255)

                         cgtcgtCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtttt                                                               <  2:2853586/93‑1 (MQ=255)

                         cgtcgtCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCtttt                                                               <  1:2546478/93‑1 (MQ=255)

                          gtcgtcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttttt                                                              <  1:1544212/93‑1 (MQ=255)

                          gtcgtcTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCttttt                                                              <  2:1419003/93‑1 (MQ=255)

                               cTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAt                                                         <  1:2343502/93‑1 (MQ=255)

                               cTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAt                                                         <  2:636486/93‑1 (MQ=255)

                               cTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAt                                                         <  2:3210260/93‑1 (MQ=255)

                               cTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCAt                                                         <  2:186623/93‑1 (MQ=255)

                                ttGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATg                                                        >  2:2337733/1‑93 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                       <  1:4390077/93‑1 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                       <  1:4256682/93‑1 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                       <  1:4019290/93‑1 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                       <  2:199768/93‑1 (MQ=255)

                                 tGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGa                                                       <  2:4381896/93‑1 (MQ=255)

                                  gCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGat                                                      <  1:2152906/93‑1 (MQ=255)

                                  gCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGat                                                      >  2:1267902/1‑93 (MQ=255)

                                  gCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGat                                                      <  1:381059/93‑1 (MQ=255)

                                   cTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGatt                                                     <  2:4272831/93‑1 (MQ=255)

                                   cTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGatt                                                     <  2:2752720/93‑1 (MQ=255)

                                    ttACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGatta                                                    <  2:1737533/93‑1 (MQ=255)

                                     tACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaa                                                   <  1:2948714/93‑1 (MQ=255)

                                     tACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaa                                                   <  2:3627896/93‑1 (MQ=255)

                                      aCGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaat                                                  <  2:3230643/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCGGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                 <  2:1824016/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                 <  1:453668/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                 <  2:3155054/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                 <  2:2682408/93‑1 (MQ=255)

                                       cGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatt                                                 <  1:1044341/93‑1 (MQ=255)

                                        gCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatta                                                <  2:899755/93‑1 (MQ=255)

                                        gCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGattaatta                                                <  1:1171571/93‑1 (MQ=255)

                                           aTGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTc                                             >  2:4423311/1‑93 (MQ=255)

                                            tgctgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCa                                            <  2:2249961/93‑1 (MQ=255)

                                              ctgcGCAAGCTGGGCGATGCCAGTTTGAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAgg                                          <  2:3790040/93‑1 (MQ=255)

                                               tgcGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGa                                         <  1:1641375/93‑1 (MQ=255)

                                                 cgcAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaa                                       <  1:4604886/93‑1 (MQ=255)

                                                   cAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaata                                     <  1:3198278/93‑1 (MQ=255)

                                                      aCTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGaaataaat                                  <  1:3825822/93‑1 (MQ=255)

                                                       cTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAaataaata                                 <  1:1836013/93‑1 (MQ=255)

                                                       cTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAaataaata                                 <  2:3765242/93‑1 (MQ=255)

                                                        tGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatat                                <  2:1246578/93‑1 (MQ=255)

                                                         gggCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatata                               >  1:4212741/1‑93 (MQ=255)

                                                          ggCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAatatat                              <  2:2665540/93‑1 (MQ=255)

                                                           gCGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATAtt                             <  2:1003295/93‑1 (MQ=255)

                                                            cGATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTc                            <  1:2667625/93‑1 (MQ=255)

                                                             gATGGCAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCg                           >  2:3896575/1‑93 (MQ=255)

                                                                  cAGTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGAcaca                      <  2:4298154/93‑1 (MQ=255)

                                                                    gTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACaga                    <  2:2803616/93‑1 (MQ=255)

                                                                    gTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACaga                    <  1:2003046/93‑1 (MQ=255)

                                                                    gTTTCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACaga                    <  2:1643066/93‑1 (MQ=255)

                                                                      ttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATCTTCGACACAGAGt                  <  2:4502685/93‑1 (MQ=255)

                                                                      ttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGt                  <  1:4589037/93‑1 (MQ=255)

                                                                      ttCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGt                  >  2:3244042/1‑93 (MQ=255)

                                                                       tCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTg                 <  2:2165501/93‑1 (MQ=255)

                                                                       tCAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTg                 <  2:1321168/93‑1 (MQ=255)

                                                                        cAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTga                <  2:1348032/93‑1 (MQ=255)

                                                                        cAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTga                <  1:1466552/93‑1 (MQ=255)

                                                                        cAATCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTga                <  2:623832/93‑1 (MQ=255)

                                                                          aTCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTgaga              <  2:4071464/93‑1 (MQ=255)

                                                                           tCAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGaa             <  1:1054275/93‑1 (MQ=255)

                                                                            cAGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGaaa            <  1:3788919/93‑1 (MQ=255)

                                                                             aGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGaaaa           <  2:1791762/93‑1 (MQ=255)

                                                                             aGTTCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATCAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGaaaa           <  1:3305161/93‑1 (MQ=255)

                                                                              attCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGTAAATAAATATATTCGACACAGAGTGAGAAAAt          <  2:2103933/92‑1 (MQ=255)

                                                                               ttCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATa         <  1:3157517/93‑1 (MQ=255)

                                                                                tCTTGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGGCATGA‑TAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGc       <  1:1777142/93‑1 (MQ=255)

                                                                                   tGCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGa     <  2:2590646/93‑1 (MQ=255)

                                                                                    gCCGGGCCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGaa    <  2:1546198/93‑1 (MQ=255)

TAGCGGCGTCGGCAATGTCGTTGAGCGTCGTCTTGCTTACGCCATGCTGCGCAAACTGGGCGATGGCAGTTTCAATCAGTTCTTGCCGGGTCTTCAGAGCTTCGGCTTTGGTTCTTTTTGCCATGATTAATTATTCAGGAAATAAATATATTCGACACAGAGTGAGAAAATAGCGAAGG  >  NC_000913/3410979‑3411157

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`