BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,471,960	T→C	H77R (CAC→CGC)	rpsL ←	30S ribosomal subunit protein S12

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,471,960	0	T	C	100.0%	625.7 / NA	201	H77R (CAC→CGC)	rpsL	30S ribosomal subunit protein S12
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (99/102); total (99/102)

Only 100 of 212 total aligned reads displayed.

ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCG  >  NC_000913/3471870‑3472049

aCGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAgcgc                                                                                         >  2:534256/1‑93 (MQ=255)

  gCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTc                                                                                       <  1:2718720/93‑1 (MQ=255)

      gAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGc                                                                                   >  1:4522448/1‑93 (MQ=255)

        gCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAg                                                                                 <  2:3837490/93‑1 (MQ=255)

        gCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAg                                                                                 <  1:3796243/93‑1 (MQ=255)

         cAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAgg                                                                                <  2:176095/93‑1 (MQ=255)

         cAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAgg                                                                                <  1:3550373/93‑1 (MQ=255)

           gTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGtt                                                                              >  2:3423463/1‑93 (MQ=255)

           gTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGtt                                                                              >  1:3056348/1‑93 (MQ=255)

           gTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGtt                                                                              >  2:784838/1‑93 (MQ=255)

           gTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGtt                                                                              >  2:1388564/1‑93 (MQ=255)

            tCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtg                                                                             >  1:3743102/1‑93 (MQ=255)

            tCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtg                                                                             <  1:2839536/93‑1 (MQ=255)

              aaGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTTTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtgtg                                                                           >  1:4687206/1‑93 (MQ=255)

              aaGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACTACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtgtg                                                                           <  1:3300478/93‑1 (MQ=255)

              aaGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTtgtg                                                                           <  2:3480266/93‑1 (MQ=255)

               aGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGa                                                                          <  2:690812/93‑1 (MQ=255)

                  gcACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCt                                                                       >  2:1408249/1‑93 (MQ=255)

                  gcACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCt                                                                       >  1:4130136/1‑93 (MQ=255)

                   caccacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCtt                                                                      <  1:4598723/93‑1 (MQ=255)

                     ccacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTca                                                                    >  1:2151695/1‑93 (MQ=255)

                      cacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcac                                                                   >  2:17741/1‑93 (MQ=255)

                         gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcaccac                                                                <  1:4327228/93‑1 (MQ=255)

                         gTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcaccac                                                                >  2:4203267/1‑93 (MQ=255)

                         gTACGGTGTGGTAACGAACACCCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTcaccac                                                                >  2:3455543/1‑93 (MQ=255)

                             ggTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAt                                                            <  1:1629209/93‑1 (MQ=255)

                             ggTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGAt                                                            <  1:1868565/93‑1 (MQ=255)

                              gtgtGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATg                                                           >  1:2014171/1‑93 (MQ=255)

                              gtgtGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATg                                                           >  1:4254818/1‑93 (MQ=255)

                              gtgtGGTAACGAACACCCGGGAGGGCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGCTg                                                           >  2:1533693/1‑93 (MQ=255)

                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTa                                                         <  2:4098740/93‑1 (MQ=255)

                                gtgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTa                                                         <  2:3932143/93‑1 (MQ=255)

                                 tgGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAg                                                        <  1:1998698/93‑1 (MQ=255)

                                  ggTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAgg                                                       >  1:2632061/1‑93 (MQ=255)

                                   gTAGCGAACACCCGGGAGGTCTTTAACGCGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      <  1:1287359/93‑1 (MQ=255)

                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      <  1:687226/93‑1 (MQ=255)

                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      >  1:442207/1‑93 (MQ=255)

                                   gTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGa                                                      >  1:2311649/1‑93 (MQ=255)

                                        gAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCa                                                 >  2:1226356/1‑93 (MQ=255)

                                        gAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCa                                                 >  2:3668967/1‑93 (MQ=255)

                                         aaCACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCAc                                                <  2:280538/93‑1 (MQ=255)

                                           cacCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACtt                                              >  1:1490839/1‑93 (MQ=255)

                                            acCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTc                                             >  1:2489864/1‑93 (MQ=255)

                                               cGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACAGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGaa                                          >  1:3354162/1‑93 (MQ=255)

                                                gggAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGaaa                                         <  1:288466/93‑1 (MQ=255)

                                                  gAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGACAcc                                       >  2:59907/1‑93 (MQ=255)

                                                  gAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAcc                                       <  2:965624/93‑1 (MQ=255)

                                                  gAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAcc                                       <  1:1239432/93‑1 (MQ=255)

                                                  gAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAAcc                                       >  1:1802530/1‑93 (MQ=255)

                                                   aGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCg                                      >  1:1328869/1‑93 (MQ=255)

                                                    ggTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGt                                     >  2:1942782/1‑93 (MQ=255)

                                                    ggTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGt                                     >  1:2773118/1‑93 (MQ=255)

                                                    ggTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGt                                     >  2:89771/1‑93 (MQ=255)

                                                    ggTCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGt                                     >  1:3930984/1‑93 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   <  1:1982584/93‑1 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   >  2:2418251/1‑93 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   >  1:2579085/1‑93 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   <  1:2649027/93‑1 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   <  1:791892/93‑1 (MQ=255)

                                                      tCTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTa                                   <  2:4187747/93‑1 (MQ=255)

                                                       cTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAg                                  >  2:495887/1‑93 (MQ=255)

                                                       cTTTAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAg                                  <  1:3473481/93‑1 (MQ=255)

                                                       cTTGAACACGACCGCCACGGATGAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAg                                  <  2:295718/93‑1 (MQ=255)

                                                        tttAACACGACCGCCACGGATCAGGCTCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  2:2219877/1‑93 (MQ=255)

                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:104818/1‑93 (MQ=255)

                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 <  2:2173280/93‑1 (MQ=255)

                                                        tttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGt                                 >  1:4101334/1‑93 (MQ=255)

                                                         ttAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTc                                >  2:1027531/1‑93 (MQ=255)

                                                          tAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCa                               <  1:1002357/93‑1 (MQ=255)

                                                          tAACACGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCa                               <  2:257937/93‑1 (MQ=255)

                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  1:3113702/93‑1 (MQ=255)

                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             <  1:3663243/93‑1 (MQ=255)

                                                            acacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGa                             >  1:530907/1‑93 (MQ=255)

                                                             cacGACCGCCCCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAc                            <  2:3108926/93‑1 (MQ=255)

                                                             cacGACCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGAc                            <  1:3156430/93‑1 (MQ=255)

                                                                 aCCGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAac                        >  1:136307/1‑93 (MQ=255)

                                                                   cGCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAacac                      <  2:3281339/93‑1 (MQ=255)

                                                                    gCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTGGGCCGAACACg                     >  1:3895337/1‑93 (MQ=255)

                                                                    gCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACg                     <  1:331112/93‑1 (MQ=255)

                                                                    gCCACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACg                     <  1:4467224/93‑1 (MQ=255)

                                                                      cACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGc                   >  1:841505/1‑93 (MQ=255)

                                                                      cACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGc                   >  2:4365212/1‑93 (MQ=255)

                                                                      cACGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGc                   >  2:2757023/1‑93 (MQ=255)

                                                                       aCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCa                  >  2:1274342/1‑93 (MQ=255)

                                                                       aCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCa                  <  2:4302940/93‑1 (MQ=255)

                                                                       aCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCa                  >  2:3048857/1‑93 (MQ=255)

                                                                       aCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCa                  <  2:3982192/93‑1 (MQ=255)

                                                                       aCGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCa                  >  1:4046315/1‑93 (MQ=255)

                                                                        cGGATCAGGATCACGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCAt                 <  2:3406390/93‑1 (MQ=255)

                                                                         ggatcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATa                <  1:1832320/93‑1 (MQ=255)

                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              >  2:4019271/1‑93 (MQ=255)

                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              <  2:771527/93‑1 (MQ=255)

                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              >  1:750721/1‑93 (MQ=255)

                                                                           atcaggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACt              <  2:3277151/93‑1 (MQ=255)

                                                                             caggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACttt            >  2:1903865/1‑93 (MQ=255)

                                                                              aggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTa           <  2:1357048/93‑1 (MQ=255)

                                                                               ggatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTAc          >  2:3738451/1‑93 (MQ=255)

                                                                                gatcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACg         >  1:2113374/1‑93 (MQ=255)

                                                                                  tcaCGGAGCGCTCCTGCAGGTTGTGACCTTCACCACCGCTGTAGGAACTCACTTCGAAACCGTTAGTCAGACGACAACGGCATCATTTACGCa       >  2:1576767/1‑93 (MQ=255)

                                                                                      ggAGCGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAgcgc   <  2:2851391/93‑1 (MQ=255)

ACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCG  >  NC_000913/3471870‑3472049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`