Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,478,743 T→C D19G (GAC→GGC)  yheR ← putative NAD(P)H oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,478,7430TC99.5% 602.4 / ‑5.4 193D19G (GAC→GGC) yheRputative NAD(P)H oxidoreductase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (94/98);  minor base G (1/0);  total (95/98)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 201 total aligned reads displayed.

AAAAAATCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGTCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCGCT  >  NC_000913/3478653‑3478832
                                                                                          |                                                                                         
aaaaaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGccc                                                                                         >  2:1424987/1‑93 (MQ=255)
aaaaaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGccc                                                                                         >  1:1199191/1‑93 (MQ=255)
aaaaaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGccc                                                                                         >  1:370276/1‑93 (MQ=255)
   aaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTga                                                                                      <  1:1371459/93‑1 (MQ=255)
   aaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTga                                                                                      <  2:2037276/93‑1 (MQ=255)
   aaaTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTga                                                                                      <  2:2336013/93‑1 (MQ=255)
    aaTCGGGATAGTGCGCGTAAAGGTGGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTGGCCACCGAGCCCTgat                                                                                     >  1:3843492/1‑92 (MQ=255)
     aTCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTgaga                                                                                    <  2:370784/93‑1 (MQ=255)
       cGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGAtt                                                                                  >  2:1150155/1‑93 (MQ=255)
        gggATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTc                                                                                 <  1:3237786/93‑1 (MQ=255)
        gggATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTc                                                                                 <  2:1264103/93‑1 (MQ=255)
          gATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCg                                                                               <  2:4670398/93‑1 (MQ=255)
           aTAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCgg                                                                              >  1:1011043/1‑93 (MQ=255)
           aTAGTGCGCGTAAAGGTCGTGCACGGTAACATTGATGAGCTGCGTGGCCGGTTTAAGCAGCACCCGGTTTGTTATCGAGCCCTGAGCttgcat                                                                              >  2:521201/1‑89 (MQ=255)
            tAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGa                                                                             >  2:2234491/1‑93 (MQ=255)
            tAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGa                                                                             <  1:3526648/93‑1 (MQ=255)
            tAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGa                                                                             <  2:1786830/93‑1 (MQ=255)
            tAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGa                                                                             <  2:3342368/93‑1 (MQ=255)
              gTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATg                                                                           <  1:2980831/93‑1 (MQ=255)
              ctGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATg                                                                           >  1:2415961/2‑93 (MQ=255)
                  gcgTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCa                                                                       >  1:4486523/1‑93 (MQ=255)
                  gcgTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCa                                                                       >  2:2667522/1‑93 (MQ=255)
                    gTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATa                                                                     >  2:4177273/1‑93 (MQ=255)
                    gTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATa                                                                     <  2:387347/93‑1 (MQ=255)
                    gTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATa                                                                     >  1:3469800/1‑93 (MQ=255)
                    gTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATa                                                                     <  1:2779812/93‑1 (MQ=255)
                    gTAAAGGTCGTGCAAGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATa                                                                     >  2:1722569/1‑93 (MQ=255)
                     tAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAc                                                                    >  1:3970767/1‑93 (MQ=255)
                      aaaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAca                                                                   <  2:1631179/93‑1 (MQ=255)
                      aaaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAca                                                                   <  2:3717720/93‑1 (MQ=255)
                      aaaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAca                                                                   <  2:3558169/93‑1 (MQ=255)
                      aaaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAca                                                                   <  2:3961815/93‑1 (MQ=255)
                       aaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTCCCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcag                                                                  <  1:2669834/93‑1 (MQ=255)
                       aaGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcag                                                                  <  1:1433547/93‑1 (MQ=255)
                        aGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagc                                                                 >  2:1062456/1‑93 (MQ=255)
                        aGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagc                                                                 >  1:227806/1‑93 (MQ=255)
                        aGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagc                                                                 >  1:2332419/1‑93 (MQ=255)
                        aGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagc                                                                 >  1:535972/1‑93 (MQ=255)
                         ggTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagca                                                                >  2:4343444/1‑93 (MQ=255)
                          gTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATAcagcag                                                               >  2:812672/1‑93 (MQ=255)
                           tCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACagcagc                                                              >  1:4307347/1‑93 (MQ=255)
                            cGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAgcagca                                                             >  2:703650/1‑93 (MQ=255)
                               gCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCaaaa                                                          <  2:2602008/93‑1 (MQ=255)
                                 aCGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACt                                                        >  1:44000/1‑93 (MQ=255)
                                 aCGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACt                                                        >  1:4617662/1‑93 (MQ=255)
                                   ggTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACttt                                                      >  1:4534956/1‑93 (MQ=255)
                                   ggTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACttt                                                      >  1:499385/1‑93 (MQ=255)
                                   ggTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACttt                                                      <  1:1867620/93‑1 (MQ=255)
                                   ggTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACttt                                                      <  2:1993647/93‑1 (MQ=255)
                                    gTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTc                                                     <  1:2245931/93‑1 (MQ=255)
                                    gTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTc                                                     >  1:1239800/1‑93 (MQ=255)
                                      aaCATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgc                                                   >  1:714357/1‑93 (MQ=255)
                                      aaCATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgc                                                   <  1:2082499/93‑1 (MQ=255)
                                      aaCATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgc                                                   <  1:2121762/93‑1 (MQ=255)
                                       aCATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgct                                                  <  1:4687791/93‑1 (MQ=255)
                                       aCATTGCTGAGCGGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgct                                                  <  1:1671257/93‑1 (MQ=255)
                                        cATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctg                                                 >  1:882943/1‑93 (MQ=255)
                                        cATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctg                                                 >  2:4660658/1‑93 (MQ=255)
                                        cATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctg                                                 >  1:1991015/1‑93 (MQ=255)
                                         aTTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctgg                                                >  1:777517/1‑93 (MQ=255)
                                         aTTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctgg                                                >  2:4111417/1‑93 (MQ=255)
                                          ttGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctggc                                               >  2:4568020/1‑93 (MQ=255)
                                          ttGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTAgctggc                                               >  2:1653276/1‑93 (MQ=255)
                                           tGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCgctggct                                              <  1:2523704/93‑1 (MQ=255)
                                             cTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTga                                            <  2:2147334/93‑1 (MQ=255)
                                              cgAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCTCCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTgag                                           <  2:2572860/92‑1 (MQ=255)
                                               gAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTgaga                                          <  1:56338/93‑1 (MQ=255)
                                                aGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGAc                                         >  1:1053461/1‑93 (MQ=255)
                                                 gCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGAca                                        >  1:1941952/1‑93 (MQ=255)
                                                    gCGTGGCCGGTTTAAGCAGTCCCCGGTTTGCCGCCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGAcatca                                     <  2:1349717/93‑1 (MQ=255)
                                                    gCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGAcatca                                     <  1:4310978/93‑1 (MQ=255)
                                                      gTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACatcatc                                   >  2:4601651/1‑93 (MQ=255)
                                                          cgcgTTTAAGCAGTACCCTGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATccccc                               <  2:370048/90‑1 (MQ=255)
                                                          ccGGTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATccccc                               <  1:1623416/93‑1 (MQ=255)
                                                             gTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTcc                            <  1:3037492/93‑1 (MQ=255)
                                                             gTTTAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTcc                            >  1:3649247/1‑93 (MQ=255)
                                                              tttAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTccc                           <  2:3843011/93‑1 (MQ=255)
                                                              tttAAGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTccc                           >  2:284707/1‑93 (MQ=255)
                                                                 aaGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGt                        <  2:825101/93‑1 (MQ=255)
                                                                 aaGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGt                        >  2:2756356/1‑93 (MQ=255)
                                                                  aGCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTa                       >  2:2891410/1‑93 (MQ=255)
                                                                   gCAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTAt                      >  1:651193/1‑93 (MQ=255)
                                                                    cAGTACCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATg                     <  1:3634816/93‑1 (MQ=255)
                                                                        aCCCGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGttt                 >  1:3589116/1‑93 (MQ=255)
                                                                         cccGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGtttt                <  1:1293338/93‑1 (MQ=255)
                                                                           cGGTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTtg              <  2:721846/93‑1 (MQ=255)
                                                                             gTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTtgtg            >  2:3286520/1‑93 (MQ=255)
                                                                             gTTTGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTtgtg            >  1:3420712/1‑93 (MQ=255)
                                                                              tttGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTgtgt           >  2:3457780/1‑93 (MQ=255)
                                                                              tttGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTgtgt           <  2:3922411/93‑1 (MQ=255)
                                                                                tGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGtat         <  1:366594/93‑1 (MQ=255)
                                                                                tGCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGtat         >  2:1223008/1‑93 (MQ=255)
                                                                                 gCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGGCATCATCCCCCTCCCGGTATGGTTTTTGTGtata        >  1:585655/1‑93 (MQ=255)
                                                                                 gCCACCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGtata        <  2:1901823/93‑1 (MQ=255)
                                                                                    cccGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTc     <  1:3128900/92‑1 (MQ=255)
                                                                                    aCCGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTc     >  2:2518621/1‑93 (MQ=255)
                                                                                     ccGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCg    >  1:3188884/1‑93 (MQ=255)
                                                                                      cGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCGc   <  1:1108842/93‑1 (MQ=255)
                                                                                      cGAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCGc   <  1:4221175/93‑1 (MQ=255)
                                                                                       gAGCCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCGCt  <  1:2953908/93‑1 (MQ=255)
                                                                                          |                                                                                         
AAAAAATCGGGATAGTGCGCGTAAAGGTCGTGCACGGTAACATTGCTGAGCTGCGTGGCCGGTTTAAGCAGTACCCGGTTTGCCACCGAGTCCTGAGATTCCGGATGGGCATACAGCAGCAAAACTTTCGCTGGCTGAGACATCATCCCCCTCCCGGTATGGTTTTTGTGTATAGTCGCT  >  NC_000913/3478653‑3478832

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: