BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,489,264	C→T	intergenic (‑7/+98)	yhfG ← / ← ppiA	hypothetical protein/peptidyl‑prolyl cis‑trans isomerase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,489,264	0	C	T	100.0%	706.7 / NA	195	intergenic (‑7/+98)	yhfG/ppiA	hypothetical protein/peptidyl‑prolyl cis‑trans isomerase A
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (97/98); total (97/98)

Only 100 of 202 total aligned reads displayed.

TTCAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGCCCGCGC  >  NC_000913/3489174‑3489352

ttCAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCt                                                                                        >  1:2976683/1‑93 (MQ=255)

 tCAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGtctc                                                                                       >  1:578126/1‑93 (MQ=255)

 tCAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGtctc                                                                                       <  1:3937951/93‑1 (MQ=255)

  cAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTcc                                                                                      <  2:870145/93‑1 (MQ=255)

   aaGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTccc                                                                                     <  1:2472242/93‑1 (MQ=255)

   aaGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTccc                                                                                     <  2:3522838/93‑1 (MQ=255)

   aaGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTccc                                                                                     <  1:1544166/93‑1 (MQ=255)

    aGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCt                                                                                    >  1:3725964/1‑93 (MQ=255)

    aGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCt                                                                                    >  2:1921363/1‑93 (MQ=255)

    aGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCt                                                                                    >  1:2654571/1‑93 (MQ=255)

      aCGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGa                                                                                  <  1:3430323/93‑1 (MQ=255)

      aCGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGa                                                                                  >  2:602762/1‑93 (MQ=255)

       cGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGaa                                                                                 <  1:557969/93‑1 (MQ=255)

       cGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGaa                                                                                 <  1:4359739/93‑1 (MQ=255)

       cGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGaa                                                                                 <  1:2534741/93‑1 (MQ=255)

        ggCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAAc                                                                                <  1:4385109/93‑1 (MQ=255)

           gACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACgtg                                                                             >  1:4336729/1‑93 (MQ=255)

           gACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACgtg                                                                             <  2:3191036/93‑1 (MQ=255)

              tGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGCACGTGTcc                                                                          >  2:2095057/1‑93 (MQ=255)

               ggCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCa                                                                         <  1:2714640/93‑1 (MQ=255)

                 ccTGAAAATTACGAGTACGCTGAAGCTCCCAGAGACGGGACTTTTGATTAGCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAtt                                                                       <  2:1561123/93‑1 (MQ=255)

                  cTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAttt                                                                      <  2:451564/93‑1 (MQ=255)

                  cTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAttt                                                                      <  2:3072087/93‑1 (MQ=255)

                  cTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAttt                                                                      >  2:1237375/1‑93 (MQ=255)

                  cTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAttt                                                                      <  1:1909841/93‑1 (MQ=255)

                  cTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCAttt                                                                      >  2:167072/1‑93 (MQ=255)

                    gAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGGTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGc                                                                    >  2:2152790/1‑93 (MQ=255)

                      aaaTTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCca                                                                  >  1:2117288/1‑93 (MQ=255)

                       aaTTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTCATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCcac                                                                 >  1:2512026/1‑93 (MQ=255)

                        attacgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCcaca                                                                >  1:3831671/1‑93 (MQ=255)

                         ttacgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACaa                                                               <  2:1820721/93‑1 (MQ=255)

                         ttacgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACaa                                                               <  2:3287799/93‑1 (MQ=255)

                         ttacgattacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACaa                                                               <  2:3487903/93‑1 (MQ=255)

                              attacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGtata                                                          <  2:3674930/93‑1 (MQ=255)

                              attacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGtata                                                          <  1:455118/93‑1 (MQ=255)

                               ttacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATaa                                                         >  1:726241/1‑93 (MQ=255)

                               ttacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATaa                                                         <  2:512223/93‑1 (MQ=255)

                               ttacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATaa                                                         <  2:4575552/93‑1 (MQ=255)

                               ttacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATaa                                                         >  1:85770/1‑93 (MQ=255)

                                tacgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAg                                                        <  2:2830660/93‑1 (MQ=255)

                                 acgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGc                                                       <  1:3254018/93‑1 (MQ=255)

                                 acgCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGc                                                       <  2:4414806/93‑1 (MQ=255)

                                       aaGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCaaa                                                 <  2:2972307/93‑1 (MQ=255)

                                        aGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAAt                                                <  1:1022939/93‑1 (MQ=255)

                                        aGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAAt                                                <  2:3725998/93‑1 (MQ=255)

                                         gCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATc                                               <  1:1240070/93‑1 (MQ=255)

                                           tCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCg                                             >  2:3835205/1‑93 (MQ=255)

                                           tCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCg                                             >  1:2907931/1‑93 (MQ=255)

                                           tCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCg                                             >  2:2660714/1‑93 (MQ=255)

                                            cccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCgg                                            <  1:2274749/93‑1 (MQ=255)

                                            cccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCgg                                            <  2:1342003/93‑1 (MQ=255)

                                            cccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCgg                                            <  1:1554470/93‑1 (MQ=255)

                                             ccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCggg                                           >  1:1435992/1‑93 (MQ=255)

                                             ccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCggg                                           >  1:4108036/1‑93 (MQ=255)

                                             ccAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCggg                                           <  2:2534906/93‑1 (MQ=255)

                                              cAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGt                                          <  1:3998852/93‑1 (MQ=255)

                                                gagaCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTa                                        >  2:1397452/1‑93 (MQ=255)

                                                gagaCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTa                                        >  2:3332669/1‑93 (MQ=255)

                                                gagaCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTa                                        >  2:2388098/1‑93 (MQ=255)

                                                gagaCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTa                                        >  2:4187683/1‑93 (MQ=255)

                                                 agaCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTAc                                       <  1:3233786/93‑1 (MQ=255)

                                                   aCGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTGACGc                                     >  1:1861407/1‑93 (MQ=255)

                                                     gggACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCg                                   <  1:978454/93‑1 (MQ=255)

                                                      ggACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGTGGCAAATCCGGGCTACGCCgg                                  >  2:2894893/1‑93 (MQ=255)

                                                      ggACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCgg                                  <  1:1096539/93‑1 (MQ=255)

                                                      ggACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCgg                                  >  1:886681/1‑93 (MQ=255)

                                                       gACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCggg                                 >  1:820046/1‑93 (MQ=255)

                                                        aCTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGga                                <  2:4121533/93‑1 (MQ=255)

                                                        aCTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGga                                <  2:3999680/93‑1 (MQ=255)

                                                        aCTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGga                                >  1:1747925/1‑93 (MQ=255)

                                                         cTTTTGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGgag                               >  1:3565486/1‑93 (MQ=255)

                                                          ttttGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGgaga                              >  1:2576185/1‑93 (MQ=255)

                                                          ttttGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGgaga                              <  2:186279/93‑1 (MQ=255)

                                                            ttGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGc                            <  2:665966/93‑1 (MQ=255)

                                                            ttGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGc                            >  2:3812906/1‑93 (MQ=255)

                                                             tGCTTATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCa                           <  2:3003998/93‑1 (MQ=255)

                                                                ttATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGaa                        <  2:71988/93‑1 (MQ=255)

                                                                 tATCTGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAg                       <  2:1117943/93‑1 (MQ=255)

                                                                 tATCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAg                       <  1:2848742/93‑1 (MQ=255)

                                                                  aTCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAgc                      >  2:1889433/1‑93 (MQ=255)

                                                                   tCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAgcg                     >  1:1635263/1‑93 (MQ=255)

                                                                   tCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAgcg                     >  1:1593857/1‑93 (MQ=255)

                                                                   tCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAgcg                     <  2:2767062/93‑1 (MQ=255)

                                                                   tCGGTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAgcg                     >  1:4031422/1‑93 (MQ=255)

                                                                     ggTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGcgcg                   >  2:1418332/1‑93 (MQ=255)

                                                                     ggTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGcgcg                   <  1:4668667/93‑1 (MQ=255)

                                                                      gTGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCgg                  <  1:3075160/93‑1 (MQ=255)

                                                                       tGAGTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGAggg                 >  2:1255643/1‑93 (MQ=255)

                                                                          gTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCCCAAGAATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGaaa              >  1:3121863/1‑93 (MQ=255)

                                                                          gTTTCTTCACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCaa              >  1:3902698/1‑93 (MQ=255)

                                                                            ttcttcACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGa            <  1:1231060/93‑1 (MQ=255)

                                                                              cttcACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGGGGGCAAGaat          >  1:4173723/1‑91 (MQ=255)

                                                                              cttcACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGAtt          <  1:4628999/93‑1 (MQ=255)

                                                                                 cACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTggc       >  2:322255/1‑91 (MQ=255)

                                                                                 cACTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGcc       <  1:4513370/93‑1 (MQ=255)

                                                                                  aCTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGccc      >  1:1828031/1‑93 (MQ=255)

                                                                                   cTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGCCcg     >  1:4148789/1‑93 (MQ=255)

                                                                                   cTTGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGCCcg     <  1:2069081/93‑1 (MQ=255)

                                                                                    ttGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGCCcgc    <  1:715988/93‑1 (MQ=255)

                                                                                    ttGATGTCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGACcgc    >  2:3877609/1‑93 (MQ=255)

TTCAAGACGGCGACTGGCCTGAAAATTACGATTACGCTGAAGCTCCCAGAGACGGGACTTTTGCTTATCGGTGAGTTTCTTCACTTGATGCCTCCCTGAACGTGTCCATTTGCCACAAGTATAAGCGGCAAATCCGGGTTACGCCGGGAGAGCAGAAGCGCGGGCAAGATTGCCCGCGC  >  NC_000913/3489174‑3489352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`