| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,556,990 | G→A | R364H (CGC→CAC) | rtcR → | putative 2‑component regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,556,990 | 0 | G | A | 99.5% | 719.9 / ‑5.5 | 202 | R364H (CGC→CAC) | rtcR | putative 2‑component regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (117/84); minor base C (1/0); total (118/84) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC > NC_000913/3556900‑3557079 | tGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTAcgccagcacc > 2:2102832/1‑93 (MQ=255) gcCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAgg > 1:80745/1‑93 (MQ=255) cAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGaa > 2:251182/1‑93 (MQ=255) aGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAg > 2:3429849/1‑93 (MQ=255) gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa > 1:1367183/1‑93 (MQ=255) gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa > 1:1569680/1‑93 (MQ=255) gCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGa < 2:1442050/93‑1 (MQ=255) cTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGat < 1:2834187/93‑1 (MQ=255) cTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGat < 2:2989670/93‑1 (MQ=255) ttgTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGCCCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGata < 1:489186/91‑1 (MQ=255) ggTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGatat > 1:4409393/1‑93 (MQ=255) gCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaa < 1:3352729/93‑1 (MQ=255) gCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaa < 2:2698091/93‑1 (MQ=255) cGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaacc > 1:279262/1‑93 (MQ=255) aaGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccga > 1:13062/1‑93 (MQ=255) aGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaa > 2:3673735/1‑93 (MQ=255) aGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaa < 2:625562/93‑1 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGCAGATATTgaaccgaac > 2:4426031/1‑93 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac > 1:3501432/1‑93 (MQ=255) ggCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac > 2:4026495/1‑93 (MQ=255) ggCAAATTCGGCGAAGATCTGTACGCGCGGACCAATCTCTGGACCTGCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaac < 2:4003613/93‑1 (MQ=255) gCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTgaaccgaacc > 1:2729682/1‑93 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCTCCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg < 2:2804651/93‑1 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAGGATATTGAACCGAACCTg > 2:397356/1‑93 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg > 1:1998052/1‑93 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg < 1:3731017/93‑1 (MQ=255) aaaTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTg > 1:1215443/1‑93 (MQ=255) aTTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGa > 2:1216165/1‑93 (MQ=255) tttCGCGAAGATCTGTACGCGCGGATTAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAt < 2:4405648/93‑1 (MQ=255) tttCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGAt < 2:3342205/93‑1 (MQ=255) tCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTa < 1:2913338/93‑1 (MQ=255) tCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTa < 2:3004029/93‑1 (MQ=255) cgcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAt < 1:71266/93‑1 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg > 1:4221052/1‑93 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg < 1:4265618/93‑1 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg > 1:1077815/1‑93 (MQ=255) gcgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATg < 1:1595323/93‑1 (MQ=255) cgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGa > 1:406015/1‑93 (MQ=255) cgAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGa < 1:650428/93‑1 (MQ=255) gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa < 1:141258/93‑1 (MQ=255) gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa < 2:567917/93‑1 (MQ=255) gAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGaa < 2:1529775/93‑1 (MQ=255) aGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGt < 2:1643082/93‑1 (MQ=255) aTCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTgg > 1:3526746/1‑93 (MQ=255) tCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGa > 1:2540043/1‑93 (MQ=255) tCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGa > 2:2859011/1‑93 (MQ=255) tCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGa < 2:1069350/93‑1 (MQ=255) cTGTACGCGCTGATCAATCTCTGGCCCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAGCCTGGATTATGAAGTGGAg < 2:1263153/93‑1 (MQ=255) tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc > 2:2378980/1‑93 (MQ=255) tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc > 1:213064/1‑93 (MQ=255) tGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgc < 2:475963/93‑1 (MQ=255) tACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAgcgc > 2:4349308/1‑93 (MQ=255) aCGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGcc < 2:1228051/93‑1 (MQ=255) gcgcgGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCAc < 1:3701726/93‑1 (MQ=255) ggATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCct > 1:2968362/1‑93 (MQ=255) gATCAATTTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctc > 2:4608084/1‑93 (MQ=255) gATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCATCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctc < 1:4524482/93‑1 (MQ=255) cAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcact > 1:1691099/1‑93 (MQ=255) cAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcact > 1:2253707/1‑93 (MQ=255) aaTCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCctcactc > 1:2587015/1‑93 (MQ=255) tctcTGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCtcactcac < 1:2171987/93‑1 (MQ=255) ctctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAGCCTGGATTATGAAGTGGAGCGCCACGCCTcactcact < 1:1965125/93‑1 (MQ=255) tctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTg > 1:2074411/1‑93 (MQ=255) tctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTg < 2:3222024/93‑1 (MQ=255) ctGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTgg > 1:899184/1‑93 (MQ=255) tGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGc > 2:1569021/1‑93 (MQ=255) tGGACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGc > 1:551428/1‑93 (MQ=255) ggACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCg > 2:3841453/1‑93 (MQ=255) gACCTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGa > 2:3663419/1‑93 (MQ=255) gccTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGAc < 2:2200667/92‑1 (MQ=255) aCCTTCACCCTGCCGGGTCTACGCCAGCAACAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGaa > 2:1614223/1‑92 (MQ=255) ccTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACa > 1:2467525/1‑93 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg > 2:3555847/1‑93 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg > 2:2707919/1‑93 (MQ=255) cTTCACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAg > 1:3985523/1‑93 (MQ=255) cACCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgt > 1:974020/1‑93 (MQ=255) aCCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtg > 1:3072305/1‑93 (MQ=255) aCCCTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTAAGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtg > 2:22910/1‑93 (MQ=255) cccTGCCGGTTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgc < 1:4093953/93‑1 (MQ=255) cccTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgc > 1:2404264/1‑93 (MQ=255) cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt > 1:3426487/1‑93 (MQ=255) cTGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAgcgtgcgt > 1:4371248/1‑93 (MQ=255) tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGtt < 1:2154394/93‑1 (MQ=255) tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGtt < 1:4608084/93‑1 (MQ=255) tGCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGtt < 2:4340904/93‑1 (MQ=255) tccGGGCCTACGCCCACACCGGGAAGCTATTCGACGGAACCTGGTTTGTCAGGTGGCGCGCCACGCCTCACTTACAGGCGCCAGCGAGCGttt > 2:1742257/2‑93 (MQ=255) gCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCTCTCACTGGCGACAGCGTGCGttt < 1:4158860/93‑1 (MQ=255) gCCGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGttt < 1:2641090/93‑1 (MQ=255) cGGGTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTa > 2:310335/1‑93 (MQ=255) gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTaa > 1:3924264/1‑93 (MQ=255) gggTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTaa < 1:2374937/93‑1 (MQ=255) gTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAaca < 1:4462057/93‑1 (MQ=255) gTCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAaca < 1:3276440/93‑1 (MQ=255) tCTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAacac > 2:200090/1‑93 (MQ=255) cTACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACAcc > 2:3914943/1‑93 (MQ=255) tACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCg > 2:4146170/1‑93 (MQ=255) tACGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCg > 2:486564/1‑93 (MQ=255) aCGCCAGCACCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGa < 2:2627883/93‑1 (MQ=255) gccagcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAg > 2:1880893/1‑93 (MQ=255) agcaccagGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAgcgc < 2:2661894/93‑1 (MQ=255) | TGCGCCAGCTGGTTGCCGAAGGCAAATTTCGCGAAGATCTGTACGCGCGGATCAATCTCTGGACCTTCACCCTGCCGGGTCTACGCCAGCGCCAGGAAGATATTGAACCGAACCTGGATTATGAAGTGGAGCGCCACGCCTCACTCACTGGCGACAGCGTGCGTTTTAACACCGAAGCGC > NC_000913/3556900‑3557079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |