BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,588,897	A→G	Y354H (TAT→CAT)	ugpB ←	UgpB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,588,897	0	A	G	100.0%	761.7 / NA	238	Y354H (TAT→CAT)	ugpB	UgpB
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (112/126); total (112/126)

Only 100 of 246 total aligned reads displayed.

CGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCA  >  NC_000913/3588808‑3588986

cggcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATgcgc                                                                                        <  1:4012005/93‑1 (MQ=255)

cggcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATgcgc                                                                                        >  2:1421385/1‑93 (MQ=255)

 ggcaacggcGGCTTATTCAGGATCCTACGCGTCACGGTGTCCGGCCCTGGGTCTTTCTCACAAAAGACCTGCTCACGCGTCGGGACATGCgct                                                                                       >  2:658558/1‑93 (MQ=255)

  gcaacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctg                                                                                      <  2:2147918/93‑1 (MQ=255)

   caacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctgc                                                                                     <  1:3585194/93‑1 (MQ=255)

   caacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctgc                                                                                     >  2:2688302/1‑93 (MQ=255)

    aacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctgct                                                                                    >  1:1006266/1‑93 (MQ=255)

    aacggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCgctgct                                                                                    >  2:1333112/1‑93 (MQ=255)

     acggcGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCtt                                                                                   >  1:1898720/1‑93 (MQ=255)

       ggcggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTg                                                                                 <  2:1129336/93‑1 (MQ=255)

        gcggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTgg                                                                                >  1:3626341/1‑93 (MQ=255)

         cggcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGt                                                                               <  1:3929786/93‑1 (MQ=255)

           gcTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGa                                                                             <  2:4533283/93‑1 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            <  2:3497821/93‑1 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            >  1:2185085/1‑93 (MQ=255)

            cTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGAt                                                                            <  2:1566074/93‑1 (MQ=255)

              tATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTg                                                                          <  2:2638898/93‑1 (MQ=255)

               aTTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGATTTGGTGATTgg                                                                         <  2:4030293/93‑1 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        <  1:698508/93‑1 (MQ=255)

                ttCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGc                                                                        >  1:3360984/1‑93 (MQ=255)

                 tCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCa                                                                       >  2:723215/1‑93 (MQ=255)

                 tCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCa                                                                       <  1:3758453/93‑1 (MQ=255)

                  cAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAg                                                                      >  1:4157339/1‑93 (MQ=255)

                   aGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGa                                                                     >  1:163487/1‑93 (MQ=255)

                    gCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGAt                                                                    <  1:3805324/93‑1 (MQ=255)

                     cATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATa                                                                   <  1:2077603/93‑1 (MQ=255)

                      aTCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATaa                                                                  >  2:2035171/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 >  2:2292230/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 <  1:4678333/93‑1 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 >  2:1974547/1‑93 (MQ=255)

                       tCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAc                                                                 >  1:3176055/1‑93 (MQ=255)

                        cTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAAcc                                                                <  1:4331977/93‑1 (MQ=255)

                             gcgTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGttt                                                           >  1:1524448/1‑93 (MQ=255)

                              cgTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGtttt                                                          <  2:3247016/93‑1 (MQ=255)

                               gTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTc                                                         <  1:2301679/93‑1 (MQ=255)

                               gTCGCGGTAGCCGCCCCTGGGTTTTTCGCATAAAAGCCCTGCTCACGGGTCAGGGCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTc                                                         <  2:3742447/93‑1 (MQ=255)

                                tCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCt                                                        >  2:2956625/1‑93 (MQ=255)

                                 cgcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTg                                                       <  1:4310427/93‑1 (MQ=255)

                                  gcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGa                                                      >  2:4128133/1‑93 (MQ=255)

                                  gcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGa                                                      >  2:1577169/1‑93 (MQ=255)

                                  gcgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGa                                                      >  2:3986194/1‑93 (MQ=255)

                                   cgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAt                                                     <  1:434971/93‑1 (MQ=255)

                                   cgGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGAt                                                     <  1:943683/93‑1 (MQ=255)

                                     gTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGc                                                   >  1:1681143/1‑93 (MQ=255)

                                      tATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGcc                                                  >  2:3912752/1‑93 (MQ=255)

                                       aTCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCa                                                 <  2:1782920/93‑1 (MQ=255)

                                        tcctccCCTGGGTGTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCAc                                                <  1:1450557/93‑1 (MQ=255)

                                         ccGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACt                                               >  2:1872239/1‑93 (MQ=255)

                                          cGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTc                                              <  2:2057906/93‑1 (MQ=255)

                                             cccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGc                                           >  1:278363/1‑93 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          >  2:1239347/1‑93 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          >  2:3037058/1‑93 (MQ=255)

                                              ccTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCa                                          >  1:2939841/1‑93 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTTGTGATTGGCAGATAACCGGTTTTCTGATGCAACTAGGCAGCGtt                                     >  1:4084288/1‑93 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCGCTCGGCAGCGtt                                     <  2:1533627/93‑1 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtt                                     <  2:3846063/93‑1 (MQ=255)

                                                   gTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGtt                                     >  2:8510/1‑93 (MQ=255)

                                                    tttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGttt                                    >  1:2878837/1‑93 (MQ=255)

                                                     ttttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGATTTCTGATGCCACTCGGCAGCGtttt                                   >  1:805297/1‑93 (MQ=255)

                                                      tttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTc                                  <  2:3819735/93‑1 (MQ=255)

                                                      tttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTc                                  >  1:256167/1‑93 (MQ=255)

                                                      tttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTc                                  <  1:3006129/93‑1 (MQ=255)

                                                       ttCTCATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCt                                 <  2:3942425/93‑1 (MQ=255)

                                                        tctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTg                                <  2:1603265/93‑1 (MQ=255)

                                                        tctcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTg                                <  1:2586145/93‑1 (MQ=255)

                                                          tcATAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGc                              >  2:2423992/1‑93 (MQ=255)

                                                            aTAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCtt                            >  1:4626117/1‑93 (MQ=255)

                                                             tAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTc                           >  2:1709427/1‑93 (MQ=255)

                                                             tAAAAGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTc                           >  2:2494592/1‑93 (MQ=255)

                                                              aaaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcg                          <  1:90452/93‑1 (MQ=255)

                                                               aaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcgc                         >  2:8880/1‑93 (MQ=255)

                                                               aaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcgc                         <  2:2519203/93‑1 (MQ=255)

                                                               aaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcgc                         >  2:2247633/1‑93 (MQ=255)

                                                               aaaGCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTcgc                         >  1:2415804/1‑93 (MQ=255)

                                                                  gCCCTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAg                      <  1:77012/93‑1 (MQ=255)

                                                                   cccTGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAgg                     <  2:3511088/93‑1 (MQ=255)

                                                                      tGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaaa                  >  1:3090056/1‑93 (MQ=255)

                                                                      tGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaaa                  >  1:3352737/1‑93 (MQ=255)

                                                                      tGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaaa                  >  2:481078/1‑93 (MQ=255)

                                                                      tGCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGaaa                  <  1:1425101/93‑1 (MQ=255)

                                                                       gCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAAt                 <  2:3336618/93‑1 (MQ=255)

                                                                       gCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAAt                 <  2:424571/93‑1 (MQ=255)

                                                                       gCTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAAt                 <  2:2233249/93‑1 (MQ=255)

                                                                        gtCACGGGTCAGCTCATGCGCTGCTTCGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATc                <  1:372337/92‑1 (MQ=255)

                                                                        cTCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATc                <  1:1346525/93‑1 (MQ=255)

                                                                         tCACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCg               >  1:16132/1‑93 (MQ=255)

                                                                          cACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGa              <  2:3661535/93‑1 (MQ=255)

                                                                          cACGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGa              <  2:2576489/93‑1 (MQ=255)

                                                                           aCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAg             <  1:1325608/93‑1 (MQ=255)

                                                                           aCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAg             <  1:3885848/93‑1 (MQ=255)

                                                                           aCGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAg             >  2:3423260/1‑93 (MQ=255)

                                                                            cGGGTCAGGTCATGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAgg            <  2:290305/93‑1 (MQ=255)

                                                                              ggtcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGaa          <  1:1803349/93‑1 (MQ=255)

                                                                              ggtcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGaa          <  2:3200472/93‑1 (MQ=255)

                                                                               gtcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAAc         <  1:3222126/93‑1 (MQ=255)

                                                                                tcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACt        <  2:4016131/93‑1 (MQ=255)

                                                                                tcaggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACt        >  1:2445415/1‑93 (MQ=255)

                                                                                  aggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTc      >  1:4575161/1‑93 (MQ=255)

                                                                                  aggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTc      >  1:518333/1‑93 (MQ=255)

                                                                                   ggtcaTGCGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCg     >  1:4553919/1‑93 (MQ=255)

CGGCAACGGCGGCTTATTCAGCATCTGACGCGTCGCGGTATCCGCCCCTGGGTTTTTCTCATAAAAGCCCTGCTCACGGGTCAGGTCATACGCTGCTTTGGTGATTGGCAGATAACCGGTTTTCTGATGCCACTCGGCAGCGTTTTCTGGCTTCGCGAGGAAATCGAGGAACTTCGCCA  >  NC_000913/3588808‑3588986

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`