BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,609,699	A→G	V68V (GTA→GTG)	b3474 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,609,699	0	A	G	100.0%	547.2 / NA	172	V68V (GTA→GTG)	b3474	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (92/80); total (92/80)

Only 100 of 196 total aligned reads displayed.

ACTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTAGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTTAA  >  NC_000913/3609609‑3609788

tcTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGgt                                                                                         <  2:1034855/92‑1 (MQ=255)

aCTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGgt                                                                                         >  1:3466574/1‑93 (MQ=255)

 cTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCACCGTTGCCATTACGATTgtggtg                                                                                        >  2:4254867/1‑93 (MQ=255)

   ggCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTggtggt                                                                                      <  2:1947888/93‑1 (MQ=255)

    gcgcTTTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTCTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTgtggtggtg                                                                                     <  1:607031/93‑1 (MQ=255)

     cgcTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGtggtggtgg                                                                                    <  2:2972949/93‑1 (MQ=255)

      gcTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTggtggtggt                                                                                   >  1:1860765/1‑93 (MQ=255)

       cTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTgtggtggtggtg                                                                                  <  1:302561/93‑1 (MQ=255)

       cTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTgtggtggtggtg                                                                                  <  2:3952954/93‑1 (MQ=255)

        tGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGa                                                                                 <  1:3369389/93‑1 (MQ=255)

         tttttttGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGAt                                                                                <  2:3543663/92‑1 (MQ=255)

         gTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGAt                                                                                >  1:1769237/1‑93 (MQ=255)

         gTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGAt                                                                                <  2:615689/93‑1 (MQ=255)

         gTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGAt                                                                                >  1:2980350/1‑93 (MQ=255)

          ttttttGCCATCGTCCTCAACCCGCTCGTCGCCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATg                                                                               <  2:778467/93‑1 (MQ=255)

           tttttGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGc                                                                              >  2:4141401/1‑93 (MQ=255)

           tttttGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGc                                                                              >  1:150985/1‑93 (MQ=255)

            ttttGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCt                                                                             <  2:2211232/93‑1 (MQ=255)

              ttGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGa                                                                           <  2:3796698/93‑1 (MQ=255)

                gCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATc                                                                         >  2:3226683/1‑93 (MQ=255)

                  cATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGc                                                                       >  1:955557/1‑93 (MQ=255)

                  cATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATAGc                                                                       >  1:3011439/1‑93 (MQ=255)

                    tCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCAc                                                                     >  1:144749/1‑93 (MQ=255)

                    tCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCAc                                                                     <  1:2366164/93‑1 (MQ=255)

                     cGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACt                                                                    <  1:2724635/93‑1 (MQ=255)

                       tCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTaa                                                                  >  1:4282975/1‑93 (MQ=255)

                       tCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTaa                                                                  <  1:7717/93‑1 (MQ=255)

                        ccTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAAc                                                                 <  1:4672978/93‑1 (MQ=255)

                         cTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAAcc                                                                <  1:4206288/93‑1 (MQ=255)

                          tCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACcg                                                               >  1:1926487/1‑93 (MQ=255)

                          tCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACcg                                                               >  2:2781906/1‑93 (MQ=255)

                           cAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACcgc                                                              >  2:3152947/1‑93 (MQ=255)

                            aaCCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGAGGTGATGCTGATCGCACTAACcgcg                                                             >  2:3420256/1‑93 (MQ=255)

                              cccGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCt                                                           >  1:919691/1‑93 (MQ=255)

                               ccGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTg                                                          <  2:1728310/93‑1 (MQ=255)

                                cGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTgg                                                         <  2:761827/93‑1 (MQ=255)

                                 gCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGt                                                        >  1:3517545/1‑93 (MQ=255)

                                  cTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTc                                                       <  1:3331374/93‑1 (MQ=255)

                                  cTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTc                                                       <  1:2069752/93‑1 (MQ=255)

                                   tCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCg                                                      >  1:3183739/1‑93 (MQ=255)

                                     gTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGc                                                    >  2:2551911/1‑93 (MQ=255)

                                     gTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGc                                                    >  2:3606117/1‑93 (MQ=255)

                                     gTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGc                                                    >  2:144982/1‑93 (MQ=255)

                                     gTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGc                                                    >  1:3846280/1‑93 (MQ=255)

                                      tCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCg                                                   >  1:116174/1‑93 (MQ=255)

                                      tCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCg                                                   >  2:412265/1‑93 (MQ=255)

                                       cACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGt                                                  >  2:1959672/1‑93 (MQ=255)

                                        aCCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATTGCACTAACCGCGCTGGTCGGCGTa                                                 >  1:3824967/1‑93 (MQ=255)

                                        aCCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTa                                                 >  2:56860/1‑93 (MQ=255)

                                        aCCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTa                                                 >  1:3833621/1‑93 (MQ=255)

                                         ccTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTAc                                                <  1:4321056/93‑1 (MQ=255)

                                         ccTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTAc                                                <  2:1203285/93‑1 (MQ=255)

                                          cttgTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGACCGCACTAACCGCGCTGGTCGGCGTACt                                               <  1:663504/90‑1 (MQ=255)

                                          cTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACt                                               <  1:140389/93‑1 (MQ=255)

                                           tGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTg                                              >  1:156859/1‑93 (MQ=255)

                                            ggTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTgg                                             >  2:102033/1‑93 (MQ=255)

                                            ggTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTgg                                             <  1:2914411/93‑1 (MQ=255)

                                             gTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTggc                                            <  1:1433529/93‑1 (MQ=255)

                                               ttATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTggcgg                                          >  1:4575967/1‑93 (MQ=255)

                                                 aTTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCa                                        <  1:3758704/93‑1 (MQ=255)

                                                 aTTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCa                                        >  1:148652/1‑93 (MQ=255)

                                                  ttCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCAt                                       <  2:1304363/93‑1 (MQ=255)

                                                    cgtcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCg                                     <  1:1049990/93‑1 (MQ=255)

                                                    cgtcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCg                                     <  2:1595310/93‑1 (MQ=255)

                                                    cgtcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCg                                     <  1:1962347/93‑1 (MQ=255)

                                                     gtcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGt                                    <  2:2541669/93‑1 (MQ=255)

                                                      tcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGtt                                   <  2:2955970/93‑1 (MQ=255)

                                                      tcgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTAGTGGTGATGCTGATCGCACTAACCGCGCGGGTCGGCGTACTGGCGGCATCGtt                                   <  2:4312706/93‑1 (MQ=255)

                                                       cgGGGAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGttt                                  <  2:2241480/93‑1 (MQ=255)

                                                          ggAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAAc                               <  1:1356465/93‑1 (MQ=255)

                                                           gAGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACg                              <  2:4189238/93‑1 (MQ=255)

                                                            aGTACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGa                             >  2:1091356/1‑93 (MQ=255)

                                                              tACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAAt                           <  1:405016/93‑1 (MQ=255)

                                                              tACAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAAt                           >  1:2397393/1‑93 (MQ=255)

                                                               aCAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAAtt                          >  1:1010480/1‑93 (MQ=255)

                                                                cAACGCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAAttt                         <  1:4084707/93‑1 (MQ=255)

                                                                    gCCCCGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTAtct                     <  2:720343/93‑1 (MQ=255)

                                                                     ccccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTAtctc                    <  2:1406112/93‑1 (MQ=255)

                                                                      cccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATctct                   <  2:1690858/93‑1 (MQ=255)

                                                                      cccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATctct                   >  2:4447897/1‑93 (MQ=255)

                                                                       ccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTa                  <  1:1031116/93‑1 (MQ=255)

                                                                       ccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTa                  <  2:2604537/93‑1 (MQ=255)

                                                                       ccGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTa                  <  1:3851858/93‑1 (MQ=255)

                                                                        cGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAt                 <  2:3306299/93‑1 (MQ=255)

                                                                        cGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAt                 <  2:3698388/93‑1 (MQ=255)

                                                                        cGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAt                 <  2:2872226/93‑1 (MQ=255)

                                                                        cGTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAt                 <  1:4231123/93‑1 (MQ=255)

                                                                         gTTGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAtg                >  1:4258029/1‑93 (MQ=255)

                                                                          ttGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAtgc               <  2:3775032/93‑1 (MQ=255)

                                                                          ttGCCATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAtgc               >  1:2611077/1‑93 (MQ=255)

                                                                          ttGCCATTACGATTGTGGTGGTGGAGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAtgc               >  1:4383582/1‑93 (MQ=255)

                                                                             ccATTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTAtgctgc            >  2:3640962/1‑93 (MQ=255)

                                                                               aTTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCg          >  2:3119964/1‑93 (MQ=255)

                                                                               aTTACGATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCg          >  2:831242/1‑93 (MQ=255)

                                                                                  aCGATTGTGGTGGTGGTGATGCTGATCGCACTAGCCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAg       <  1:537089/93‑1 (MQ=255)

                                                                                    gATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGtt     >  1:3415951/1‑93 (MQ=255)

                                                                                    gATTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGATGGCGAAGtt     >  1:3084545/1‑93 (MQ=255)

                                                                                     aTTGTGGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGttt    <  1:3927210/93‑1 (MQ=255)

                                                                                      ttGTGGTGGTGGTGATGCTCATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTta   >  2:4561843/1‑93 (MQ=255)

                                                                                       tgtgGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTtaa  <  1:1036345/93‑1 (MQ=255)

ACTGGCGCTGTTTTTTGCCATCGTCCTCAACCCGCTCGTCACCTGGTTTATTCGTCGGGGAGTACAACGCCCCGTTGCCATTACGATTGTAGTGGTGGTGATGCTGATCGCACTAACCGCGCTGGTCGGCGTACTGGCGGCATCGTTTAACGAATTTATCTCTATGCTGCCGAAGTTTAA  >  NC_000913/3609609‑3609788

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`