BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,624,135	A→G	N100N (AAT→AAC)	b3485 ←	putative transporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,624,135	0	A	G	100.0%	804.0 / NA	249	N100N (AAT→AAC)	b3485	putative transporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (130/119); total (130/119)

Only 100 of 261 total aligned reads displayed.

AAATGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATATTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGACGATA  >  NC_000913/3624045‑3624224

 aaTGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGttt                                                                                        >  1:292899/1‑93 (MQ=255)

  aTGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGCAAATTAGGGGGAATGTTTa                                                                                       >  1:2896798/1‑93 (MQ=255)

  aTGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTa                                                                                       <  1:753393/93‑1 (MQ=255)

  aTGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTa                                                                                       >  1:4174089/1‑93 (MQ=255)

   tGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTAt                                                                                      <  2:2104730/93‑1 (MQ=255)

   tGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTAt                                                                                      >  1:64399/1‑93 (MQ=255)

    gCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATc                                                                                     <  1:129762/93‑1 (MQ=255)

    gCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATc                                                                                     <  2:2379134/93‑1 (MQ=255)

    gCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATc                                                                                     <  2:3813327/93‑1 (MQ=255)

    gCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATc                                                                                     >  1:3683878/1‑93 (MQ=255)

      cTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATcgc                                                                                   <  1:3253475/93‑1 (MQ=255)

        ggCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGa                                                                                 <  2:2962693/93‑1 (MQ=255)

         gCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGaa                                                                                <  1:3893629/93‑1 (MQ=255)

         gCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGaa                                                                                <  1:2615984/93‑1 (MQ=255)

         gCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGaa                                                                                <  2:46424/93‑1 (MQ=255)

         gCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGaa                                                                                <  1:2038417/93‑1 (MQ=255)

         gCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGaa                                                                                <  1:4357139/93‑1 (MQ=255)

          cTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAg                                                                               >  2:651309/1‑93 (MQ=255)

          cTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAg                                                                               <  2:2439975/93‑1 (MQ=255)

           tCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAgg                                                                              >  1:3260864/1‑93 (MQ=255)

           tCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGAGGAATGTTTATCGCGAAgg                                                                              >  1:1556722/1‑93 (MQ=255)

            cATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGt                                                                             <  2:166058/93‑1 (MQ=255)

            cATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGt                                                                             >  2:3099102/1‑93 (MQ=255)

            cATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGt                                                                             >  1:3175578/1‑93 (MQ=255)

            cATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGt                                                                             <  1:2579463/93‑1 (MQ=255)

              tGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGtat                                                                           <  2:340684/93‑1 (MQ=255)

              tGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGtat                                                                           >  1:1681320/1‑93 (MQ=255)

              tGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGtat                                                                           <  1:3997100/93‑1 (MQ=255)

               gcgcGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGtata                                                                          <  2:3740023/93‑1 (MQ=255)

               gcgcGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGtata                                                                          <  2:1183316/93‑1 (MQ=255)

                cgcgTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAg                                                                         <  2:1946848/93‑1 (MQ=255)

                cgcgTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAg                                                                         <  1:2102152/93‑1 (MQ=255)

                 gcgTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGc                                                                        >  1:1750629/1‑93 (MQ=255)

                 gcgTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGc                                                                        <  2:2040935/93‑1 (MQ=255)

                  cgTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCg                                                                       >  2:2902668/1‑93 (MQ=255)

                   gTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGt                                                                      <  2:3530110/93‑1 (MQ=255)

                    tGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTc                                                                     <  1:1002488/93‑1 (MQ=255)

                    tGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTc                                                                     >  2:931902/1‑93 (MQ=255)

                     ggCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTcc                                                                    <  2:389917/93‑1 (MQ=255)

                      gCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCg                                                                   <  2:1308784/93‑1 (MQ=255)

                      gCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCg                                                                   >  1:945327/1‑93 (MQ=255)

                         tCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCg                                                                >  2:75147/1‑93 (MQ=255)

                          cGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGt                                                               >  1:990712/1‑93 (MQ=255)

                           gACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTc                                                              >  2:3943673/1‑93 (MQ=255)

                            aCGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTcc                                                             <  2:1924096/93‑1 (MQ=255)

                              gTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAg                                                           >  2:804318/1‑93 (MQ=255)

                              gTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAg                                                           >  1:2154758/1‑93 (MQ=255)

                               ttCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGt                                                          >  2:2149389/1‑93 (MQ=255)

                               ttCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGt                                                          >  1:3522904/1‑93 (MQ=255)

                                  aCCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCg                                                       >  2:4118363/1‑93 (MQ=255)

                                  aCCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCg                                                       >  2:1180663/1‑93 (MQ=255)

                                    cTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGc                                                     >  1:3849221/1‑93 (MQ=255)

                                     tGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGAGAAGGTATAGCGTCCGGCGTCCAGTCCGGca                                                    >  1:1129726/1‑93 (MQ=255)

                                       aaTATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatc                                                  <  2:1259825/93‑1 (MQ=255)

                                        atatCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatcc                                                 >  2:2512550/1‑93 (MQ=255)

                                        atatCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatcc                                                 <  2:2326085/93‑1 (MQ=255)

                                        atatCCGGCTGGCGTACGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatcc                                                 <  2:4161546/93‑1 (MQ=255)

                                         tatCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatcca                                                >  2:3189486/1‑93 (MQ=255)

                                         tatCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGcatcca                                                >  1:2326520/1‑93 (MQ=255)

                                              ggCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCa                                           <  1:820186/93‑1 (MQ=255)

                                              ggCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCa                                           <  1:300029/93‑1 (MQ=255)

                                              ggCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAAGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCa                                           >  2:3327709/1‑93 (MQ=255)

                                               gCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCAt                                          <  2:111910/93‑1 (MQ=255)

                                                cTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATc                                         <  2:2789813/93‑1 (MQ=255)

                                                     gTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATcggcgg                                    <  2:3660876/93‑1 (MQ=255)

                                                          gCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGatc                               >  2:4527546/1‑93 (MQ=255)

                                                          gCGAGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGatc                               <  2:2361638/93‑1 (MQ=255)

                                                           cagggACATCACGCTGAAAATTAGGAGGAATGTTAATCGCGAAAGTAAAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGatca                              <  2:362815/90‑1 (MQ=255)

                                                             aGGACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGatcatc                            >  2:1376308/1‑93 (MQ=255)

                                                              ggACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCAtct                           <  1:1817479/93‑1 (MQ=255)

                                                              ggACATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCAtct                           >  1:3098834/1‑93 (MQ=255)

                                                                 cATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCg                        >  2:3042258/1‑93 (MQ=255)

                                                                 cATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCg                        <  1:2730499/93‑1 (MQ=255)

                                                                 cATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATACTCTCCg                        >  1:160934/1‑93 (MQ=255)

                                                                 cATCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGCATAGCGTCCGGCGTACAGGCAGGCATCCATCTCATCGGCGGGGATCATATCCg                        >  1:3484663/1‑93 (MQ=255)

                                                                  aTCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCgg                       <  1:1317797/93‑1 (MQ=255)

                                                                   tCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGt                      <  2:2742438/93‑1 (MQ=255)

                                                                   tCACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGt                      <  1:865969/93‑1 (MQ=255)

                                                                    cACGCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTg                     >  1:3431917/1‑93 (MQ=255)

                                                                       gCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCa                  >  1:4480914/1‑93 (MQ=255)

                                                                       gCTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCa                  >  1:2537918/1‑93 (MQ=255)

                                                                        cTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCaa                 >  2:4550671/1‑93 (MQ=255)

                                                                        cTGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCaa                 <  2:1758151/93‑1 (MQ=255)

                                                                         tGAAAATTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCaaa                >  2:4051005/1‑93 (MQ=255)

                                                                           aaaaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCaaaaa              <  2:1538588/93‑1 (MQ=255)

                                                                           aaaaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCaaaaa              >  1:2253752/1‑93 (MQ=255)

                                                                            aaaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAAc             <  2:1862022/93‑1 (MQ=255)

                                                                            aaaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAAc             >  2:4341466/1‑93 (MQ=255)

                                                                             aaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAAcc            >  1:4467004/1‑93 (MQ=255)

                                                                             aaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAAcc            >  1:4223908/1‑93 (MQ=255)

                                                                             aaTTAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAAcc            >  1:3573283/1‑93 (MQ=255)

                                                                               ttAGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCAc          <  2:1704736/93‑1 (MQ=255)

                                                                               tgaGGCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCAc          <  1:1918035/91‑1 (MQ=255)

                                                                                  ggCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGGAAAAACCACGGa       >  2:1593200/1‑93 (MQ=255)

                                                                                  ggCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGa       <  1:471337/93‑1 (MQ=255)

                                                                                  ggCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGa       <  2:2228761/93‑1 (MQ=255)

                                                                                  ggCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGa       <  2:481228/93‑1 (MQ=255)

                                                                                   gCGGAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGAc      <  2:2588994/93‑1 (MQ=255)

                                                                                     ggAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGACGa    <  1:2455336/93‑1 (MQ=255)

                                                                                     ggAATGTTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATACATCTCATCGGCGGTGATCATCTCCGGCGGCAAAAACCACGGACGa    >  2:295005/1‑93 (MQ=255)

AAATGCCTGGCTCATGCGCGTGGCATCGACGTTCACCTGAATATCCGGCTGGCGTCCGGCGAGGACATCACGCTGAAAATTAGGCGGAATATTTATCGCGAAGGTATAGCGTCCGGCGTCCAGTCCGGCATCCATCTCATCGGCGGTGATCATCTCCGGTGGCAAAAACCACGGACGATA  >  NC_000913/3624045‑3624224

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`