Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,698,466 A→G N92S (AAC→AGC)  yhjV → putative transporter protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,698,4660AG99.6% 728.5 / NA 228N92S (AAC→AGC) yhjVputative transporter protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (116/111);  minor base T (0/1);  total (116/112)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 235 total aligned reads displayed.

GGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCT  >  NC_000913/3698376‑3698555
                                                                                          |                                                                                         
gggTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCt                                                                                         <  2:1629832/93‑1 (MQ=255)
 ggTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTg                                                                                        >  1:1507110/1‑93 (MQ=255)
     gTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGa                                                                                    <  1:3584312/93‑1 (MQ=255)
      tGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGaa                                                                                   <  2:3320108/93‑1 (MQ=255)
      tGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGaa                                                                                   <  1:4263195/93‑1 (MQ=255)
       gCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAt                                                                                  >  2:397981/1‑93 (MQ=255)
       gCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAt                                                                                  >  2:1089130/1‑93 (MQ=255)
       gCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAt                                                                                  >  2:1137457/1‑93 (MQ=255)
          ggACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAAtttt                                                                               >  1:3828109/1‑93 (MQ=255)
            aCATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTcc                                                                             <  1:366994/93‑1 (MQ=255)
            aCATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTcc                                                                             <  2:183441/93‑1 (MQ=255)
             cATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCt                                                                            <  1:1807106/93‑1 (MQ=255)
              atttatttAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTc                                                                           >  1:2485315/1‑93 (MQ=255)
              atttatttAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTc                                                                           <  1:2184776/93‑1 (MQ=255)
               tttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCg                                                                          <  1:3336137/93‑1 (MQ=255)
                ttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgg                                                                         <  2:1516420/93‑1 (MQ=255)
                ttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgg                                                                         <  1:1642506/93‑1 (MQ=255)
                ttatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgg                                                                         <  1:3894505/93‑1 (MQ=255)
                 tatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCggg                                                                        >  2:3075407/1‑93 (MQ=255)
                 tatttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCggg                                                                        <  1:3644896/93‑1 (MQ=255)
                  atttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgggg                                                                       >  1:2326781/1‑93 (MQ=255)
                  atttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgggg                                                                       <  1:2415230/93‑1 (MQ=255)
                  atttaAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCgggg                                                                       <  2:3652853/93‑1 (MQ=255)
                     taAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTa                                                                    <  1:60326/93‑1 (MQ=255)
                     taAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTa                                                                    <  2:2310324/93‑1 (MQ=255)
                      aaaaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTAt                                                                   <  1:353992/93‑1 (MQ=255)
                       aaaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATc                                                                  <  2:1917630/93‑1 (MQ=255)
                       aaaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATc                                                                  <  2:961684/93‑1 (MQ=255)
                       aaaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATc                                                                  <  1:746413/93‑1 (MQ=255)
                        aaaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCt                                                                 >  2:2003/1‑93 (MQ=255)
                         aaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTa                                                                >  2:276137/1‑93 (MQ=255)
                         aaCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTa                                                                >  1:2301169/1‑93 (MQ=255)
                          aCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAc                                                               <  2:509047/93‑1 (MQ=255)
                          aCCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTAc                                                               <  2:2981037/93‑1 (MQ=255)
                           cccTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACt                                                              <  2:1674290/93‑1 (MQ=255)
                            ccTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACtt                                                             <  2:1557925/93‑1 (MQ=255)
                            ccTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACtt                                                             >  2:3923899/1‑93 (MQ=255)
                             cTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACttt                                                            >  2:2130589/1‑93 (MQ=255)
                              tttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACtttt                                                           >  2:2739755/1‑93 (MQ=255)
                              tttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACtttt                                                           >  1:118655/1‑93 (MQ=255)
                              tttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACtttt                                                           >  1:4212781/1‑93 (MQ=255)
                               ttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACttttt                                                          >  1:1435265/1‑93 (MQ=255)
                               ttCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACttttt                                                          <  1:4547668/93‑1 (MQ=255)
                                  tGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTtgat                                                       >  2:326212/1‑93 (MQ=255)
                                   gAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTtgatg                                                      >  1:3521748/1‑93 (MQ=255)
                                     aaGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTgatgat                                                    <  1:4571103/93‑1 (MQ=255)
                                     aaGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTgatgat                                                    >  1:105319/1‑93 (MQ=255)
                                      aGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTCCTTTTTGATGAtt                                                   <  2:2067444/93‑1 (MQ=255)
                                      aGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGAtt                                                   <  2:193959/93‑1 (MQ=255)
                                      aGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGAtt                                                   <  1:3915584/93‑1 (MQ=255)
                                       gCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTa                                                  <  2:3432957/93‑1 (MQ=255)
                                         gATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATc                                                <  1:973350/93‑1 (MQ=255)
                                            tCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCAc                                             >  1:1992603/1‑93 (MQ=255)
                                             ccTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACg                                            <  1:4660497/93‑1 (MQ=255)
                                             ccTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACg                                            <  1:2044942/93‑1 (MQ=255)
                                             ccTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACg                                            >  1:2583533/1‑93 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTTCTTTTTGATGATTATCCACgg                                           <  1:2718675/93‑1 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                           >  2:2728809/1‑93 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                           >  2:1385940/1‑93 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                           <  2:3203955/93‑1 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                           <  1:4488328/93‑1 (MQ=255)
                                              cTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACgg                                           >  1:1223407/1‑93 (MQ=255)
                                               tGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                          >  1:2982507/1‑93 (MQ=255)
                                               tGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                          <  1:865710/93‑1 (MQ=255)
                                               tGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACggg                                          >  2:4473431/1‑93 (MQ=255)
                                                gTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGa                                         >  1:2595813/1‑93 (MQ=255)
                                                 tAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAt                                        >  1:3718168/1‑93 (MQ=255)
                                                    tGACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAtttt                                     <  2:3175814/93‑1 (MQ=255)
                                                     gACTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGAttttt                                    >  1:2346846/1‑93 (MQ=255)
                                                      aCTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTa                                   <  1:1738612/93‑1 (MQ=255)
                                                      aCTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTa                                   <  2:459498/93‑1 (MQ=255)
                                                       cTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTAt                                  >  2:436660/1‑93 (MQ=255)
                                                       cTACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTAt                                  >  2:3368950/1‑93 (MQ=255)
                                                        tACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATc                                 <  1:1135719/93‑1 (MQ=255)
                                                        tACACCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATc                                 <  1:470931/93‑1 (MQ=255)
                                                          cacCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTa                               >  2:4194018/1‑93 (MQ=255)
                                                          cacCGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTa                               <  1:4269247/93‑1 (MQ=255)
                                                            ccGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTAct                             >  2:813824/1‑93 (MQ=255)
                                                             cGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActc                            >  1:3038299/1‑93 (MQ=255)
                                                             cGATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActc                            >  2:1309113/1‑93 (MQ=255)
                                                              gATATTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActct                           >  1:1408685/1‑93 (MQ=255)
                                                               atatTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctc                          <  2:635024/93‑1 (MQ=255)
                                                               atatTATCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctc                          <  1:50487/93‑1 (MQ=255)
                                                                tattatCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                         <  2:2863291/93‑1 (MQ=255)
                                                                tattatCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                         <  1:3205537/93‑1 (MQ=255)
                                                                tattatCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                         <  1:3961412/93‑1 (MQ=255)
                                                                tattatCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTActctct                         <  1:1324715/93‑1 (MQ=255)
                                                                     tCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATTTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCg                    >  1:3123759/1‑93 (MQ=255)
                                                                     tCAGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCg                    >  2:1461807/1‑93 (MQ=255)
                                                                       aGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTg                  <  2:4278528/93‑1 (MQ=255)
                                                                       aGTCATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTg                  >  2:2609114/1‑93 (MQ=255)
                                                                          cATTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGtt               >  2:4138713/1‑93 (MQ=255)
                                                                           aTTACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGttt              >  1:3988553/1‑93 (MQ=255)
                                                                             tACCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTc            <  1:1234641/93‑1 (MQ=255)
                                                                              aCCTGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCg           >  1:2922068/1‑93 (MQ=255)
                                                                                 tGGGGAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACa        <  2:2284271/93‑1 (MQ=255)
                                                                                  ggggAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAg       >  2:1208624/1‑93 (MQ=255)
                                                                                   gggAAGAGCTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAgc      >  2:3599112/1‑93 (MQ=255)
                                                                                   gcgaagagCTGGGGAATTTTCCTGGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTGCTCTCTCTCCGTGGTTTTCGACAgc      <  2:683176/91‑1 (MQ=255)
                                                                                       agagCTGGCGAAGATTCCTCGGGGTTATCTCCTTTTAGATGATTATCCACGGTATTTTTATCTACTCTCGCTCCGTGGTTTTCGACAGCGCCt  <  2:4657670/93‑1 (MQ=255)
                                                                                          |                                                                                         
GGGTAGTGCAGGACATTTATTTAAAAACCCTTTCTGAAAGCGATTCCTGTAATGACTACACCGATATTATCAGTCATTACCTGGGGAAGAACTGGGGAATTTTCCTCGGGGTTATCTACTTTTTGATGATTATCCACGGGATTTTTATCTACTCTCTCTCCGTGGTTTTCGACAGCGCCT  >  NC_000913/3698376‑3698555

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: