Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,704,865 T→C K157R (AAG→AGG)  dppA ← dipeptide transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,704,8650TC99.5% 603.3 / ‑4.8 192K157R (AAG→AGG) dppAdipeptide transport protein
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (89/102);  total (89/103)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.43e-01

Only 100 of 213 total aligned reads displayed.

GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG  >  NC_000913/3704775‑3704954
                                                                                          |                                                                                         
gACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCctt                                                                                         <  2:4250603/93‑1 (MQ=255)
 aCAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCcttt                                                                                        <  2:3635028/93‑1 (MQ=255)
 aCAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCcttt                                                                                        >  1:1335823/1‑93 (MQ=255)
 aCAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCcttt                                                                                        >  1:1839723/1‑93 (MQ=255)
  cAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCctttt                                                                                       <  2:1638470/93‑1 (MQ=255)
  cAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCctttt                                                                                       >  1:3894142/1‑93 (MQ=255)
   aGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttc                                                                                      >  2:3293372/1‑93 (MQ=255)
    gAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttca                                                                                     >  2:161576/1‑93 (MQ=255)
    gAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttca                                                                                     >  1:1756676/1‑93 (MQ=255)
    gAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttca                                                                                     >  1:640168/1‑93 (MQ=255)
    gAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttca                                                                                     <  1:4484279/93‑1 (MQ=255)
      aTAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcact                                                                                   >  2:469167/1‑93 (MQ=255)
       tAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcactt                                                                                  >  1:2888272/1‑93 (MQ=255)
       tAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcactt                                                                                  >  2:3736331/1‑93 (MQ=255)
       tAGAGGCGAAGTCCATTGCCAGGGCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcactt                                                                                  >  1:3158200/1‑93 (MQ=255)
         gagGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcacttca                                                                                >  2:714592/1‑93 (MQ=255)
          agGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTttcacttcac                                                                               >  2:186077/1‑93 (MQ=255)
           ggCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTtcacttcact                                                                              >  1:3752714/1‑93 (MQ=255)
            gCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTg                                                                             <  2:3103637/93‑1 (MQ=255)
            gCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTg                                                                             <  1:1135656/93‑1 (MQ=255)
             cGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCCCTTCACTGa                                                                            <  2:3908528/93‑1 (MQ=255)
               aaGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATc                                                                          >  2:1107092/1‑93 (MQ=255)
                aGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCa                                                                         <  2:1776904/93‑1 (MQ=255)
                 gTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAg                                                                        >  1:2440314/1‑93 (MQ=255)
                 gTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAg                                                                        >  1:1924187/1‑93 (MQ=255)
                 gTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAg                                                                        >  1:1716043/1‑93 (MQ=255)
                  tCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGc                                                                       >  1:531505/1‑93 (MQ=255)
                  tCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGc                                                                       <  1:2002629/93‑1 (MQ=255)
                     aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct                                                                    >  1:3524529/1‑93 (MQ=255)
                     aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct                                                                    >  1:1439331/1‑93 (MQ=255)
                     aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct                                                                    >  1:4197010/1‑93 (MQ=255)
                     aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct                                                                    <  2:4352762/93‑1 (MQ=255)
                     aTTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGctct                                                                    >  2:3028592/1‑93 (MQ=255)
                      ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg                                                                   >  2:699933/1‑93 (MQ=255)
                      ttGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTg                                                                   >  2:3596361/1‑93 (MQ=255)
                         ccAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCa                                                                >  1:3798031/1‑93 (MQ=255)
                         ccAGGTCAGCGAGGAACGGCGCTTCCAGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCa                                                                <  1:1905398/93‑1 (MQ=255)
                          cAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCaa                                                               >  1:2335717/1‑93 (MQ=255)
                           aGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTTTTGCaac                                                              >  2:1590935/1‑92 (MQ=255)
                            ggTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGc                                                             >  1:2802047/1‑93 (MQ=255)
                            ggTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGc                                                             >  1:3434984/1‑93 (MQ=255)
                               cAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCa                                                          <  1:1086825/93‑1 (MQ=255)
                               cAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCCCTGATCAGCTCTGGCAAGCCCa                                                          <  1:2726834/93‑1 (MQ=255)
                                aGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCAt                                                         <  2:50596/93‑1 (MQ=255)
                                 gCGAGGAACGGGGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATg                                                        >  1:2742968/1‑93 (MQ=255)
                                 gCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATg                                                        >  1:474964/1‑93 (MQ=255)
                                  cGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGc                                                       <  2:340895/93‑1 (MQ=255)
                                   gAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGcc                                                      <  1:2631708/93‑1 (MQ=255)
                                   gAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGcc                                                      <  2:1670637/93‑1 (MQ=255)
                                     ggAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCtt                                                    >  2:2610210/1‑93 (MQ=255)
                                        aCGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGa                                                 >  1:3280679/1‑93 (MQ=255)
                                         cGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGaa                                                <  2:2661578/93‑1 (MQ=255)
                                          ggCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAg                                               <  2:4513683/93‑1 (MQ=255)
                                            cgcTTCCGGGCGAGTCAGCACAAACTGAACAGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTa                                             <  2:4599417/93‑1 (MQ=255)
                                             gcTTCCGGGCGAGTCAGCACAATCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCCCTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAt                                            <  2:2940975/93‑1 (MQ=255)
                                             gcTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAt                                            <  2:58265/93‑1 (MQ=255)
                                             gcTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAt                                            <  1:714010/93‑1 (MQ=255)
                                              cTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTAtt                                           <  2:1174134/93‑1 (MQ=255)
                                               ttCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTc                                          <  2:2186179/93‑1 (MQ=255)
                                                 ccGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGt                                        >  1:128360/1‑93 (MQ=255)
                                                   gggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAg                                      >  1:563211/1‑93 (MQ=255)
                                                   gggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAg                                      <  1:2983554/93‑1 (MQ=255)
                                                    ggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGc                                     <  2:2042052/93‑1 (MQ=255)
                                                    ggCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGc                                     <  2:4306627/93‑1 (MQ=255)
                                                    ggCAAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGCCAAGCCCATGCCTTCGAAGTATTCGTAGc                                     <  2:2111213/93‑1 (MQ=255)
                                                       gAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgc                                  >  2:1966875/1‑93 (MQ=255)
                                                        aGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGCAGTATTCGTAGCTgcc                                 >  1:1724208/1‑93 (MQ=255)
                                                        aGTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGAAAGCCCATGCCTTCGAAGTATTCGTAGCTgcc                                 >  1:1028957/1‑93 (MQ=255)
                                                         gTCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgccg                                >  1:2651680/1‑93 (MQ=255)
                                                          tCAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTgccgc                               >  1:578945/1‑93 (MQ=255)
                                                           cAGCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGACCATGCCTTAGAAGTATTCGTAGCTgccgcc                              <  2:2335939/93‑1 (MQ=255)
                                                             gCACAAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAg                            >  1:2070093/1‑93 (MQ=255)
                                                             acacaAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAg                            <  2:929347/92‑1 (MQ=255)
                                                               acaAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaa                          >  2:1357466/1‑93 (MQ=255)
                                                               acaAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaa                          <  2:1036025/93‑1 (MQ=255)
                                                               acaAACTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGaa                          >  1:1622815/1‑93 (MQ=255)
                                                                  aaCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACt                       >  2:639877/1‑93 (MQ=255)
                                                                   aCTGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACtt                      >  2:3977624/1‑93 (MQ=255)
                                                                     tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa                    <  2:3466877/93‑1 (MQ=255)
                                                                     tGAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTa                    >  2:727472/1‑93 (MQ=255)
                                                                      gAACGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTAt                   <  1:3059964/93‑1 (MQ=255)
                                                                       aaCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATg                  <  1:394224/93‑1 (MQ=255)
                                                                       aaCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATg                  <  2:4511437/93‑1 (MQ=255)
                                                                        aCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATgg                 <  1:3228236/93‑1 (MQ=255)
                                                                        aCGGTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATgg                 >  2:2830902/1‑93 (MQ=255)
                                                                          ggTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTa               <  1:780511/93‑1 (MQ=255)
                                                                          ggTGTTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTa               <  1:406886/93‑1 (MQ=255)
                                                                           gtgtTGTCGTCCACCCTTTTCGCTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTAc              <  1:1545989/93‑1 (MQ=255)
                                                                           gtgtTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTAc              >  2:3535282/1‑93 (MQ=255)
                                                                           gtgtTGTCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCGCCAGAAACTTTATGGTACg             >  1:2688338/1‑93 (MQ=255)
                                                                              ttgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACggg           >  2:2523726/1‑93 (MQ=255)
                                                                              ttgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACggg           <  1:4431228/93‑1 (MQ=255)
                                                                               tgtCGTCCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTCCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGt          <  1:2509869/93‑1 (MQ=255)
                                                                                gtcgtcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACgggct         >  1:665931/1‑91 (MQ=255)
                                                                                gtcgtcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGtt         <  2:37719/93‑1 (MQ=255)
                                                                                 tcgtcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGttt        >  2:531354/1‑93 (MQ=255)
                                                                                    tcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgc     >  2:3858259/1‑93 (MQ=255)
                                                                                    tcCACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgc     <  2:2090981/93‑1 (MQ=255)
                                                                                      cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc   <  1:880091/93‑1 (MQ=255)
                                                                                      cACCCTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTgcgc   <  2:2490419/93‑1 (MQ=255)
                                                                                          |                                                                                         
GACAGAATAGAGGCGAAGTCCATTGCCAGGTCAGCGAGGAACGGCGCTTCCGGGCGAGTCAGCACAAACTGAACGGTGTTGTCGTCCACCTTTTTCACTTCACTGATCAGCTCTGGCAAGCCCATGCCTTCGAAGTATTCGTAGCTGCCGCCAGAAACTTTATGGTACGGGTTTTGCGCG  >  NC_000913/3704775‑3704954

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: