BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,724,581	T→C	Q137R (CAG→CGG)	yiaA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,724,581	0	T	C	100.0%	764.6 / NA	241	Q137R (CAG→CGG)	yiaA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/132); total (109/132)

Only 100 of 251 total aligned reads displayed.

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

aGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgt                                                                                         >  1:3480650/1‑93 (MQ=255)

 gAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCcgtg                                                                                        <  2:1460020/93‑1 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       >  2:4462798/1‑93 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       >  2:1848768/1‑93 (MQ=255)

  aaaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCgtgt                                                                                       <  1:3369361/93‑1 (MQ=255)

   aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt                                                                                      >  2:757847/1‑93 (MQ=255)

   aaCAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGtt                                                                                      <  1:3232696/93‑1 (MQ=255)

      aGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCt                                                                                   >  2:3414122/1‑93 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  <  2:4136999/93‑1 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  >  2:4036043/1‑93 (MQ=255)

       gATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtt                                                                                  <  1:2352559/93‑1 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  2:556107/93‑1 (MQ=255)

        aTTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  2:2938102/93‑1 (MQ=255)

        aTTAGTGAGTTAACTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCttt                                                                                 <  1:2677149/93‑1 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                >  1:2460389/1‑93 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                <  1:715705/93‑1 (MQ=255)

         ttAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCtttt                                                                                <  2:1667808/93‑1 (MQ=255)

            gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGTGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTATCCCGTGTTTCTTTtggt                                                                             <  2:81638/93‑1 (MQ=255)

            gTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggt                                                                             <  2:3810221/93‑1 (MQ=255)

             tGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtg                                                                            <  2:1422440/93‑1 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           >  2:2532480/1‑93 (MQ=255)

              gAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTtggtgg                                                                           >  2:2373964/1‑93 (MQ=255)

                gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt                                                                         <  1:2778643/93‑1 (MQ=255)

                gTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGt                                                                         >  1:1352922/1‑93 (MQ=255)

                    aGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAt                                                                     >  1:3616037/1‑93 (MQ=255)

                     gTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTAtt                                                                    <  1:4543941/93‑1 (MQ=255)

                      tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc                                                                   <  2:3233582/93‑1 (MQ=255)

                      tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc                                                                   >  1:3038764/1‑93 (MQ=255)

                      tAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTc                                                                   <  1:570301/93‑1 (MQ=255)

                          aGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGc                                                               >  1:1011816/1‑93 (MQ=255)

                           gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa                                                              <  1:3025281/93‑1 (MQ=255)

                           gCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCa                                                              <  1:4290298/93‑1 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             <  1:3670799/93‑1 (MQ=255)

                            cccGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCAt                                                             <  1:4121615/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  1:1915161/93‑1 (MQ=255)

                              cGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCa                                                           <  1:2010085/93‑1 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          <  2:2872572/93‑1 (MQ=255)

                               ggTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCAc                                                          >  1:3100958/1‑93 (MQ=255)

                                gTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACg                                                         >  1:4371670/1‑93 (MQ=255)

                                  cacaTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGaa                                                       <  1:3314117/93‑1 (MQ=255)

                                    caTTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAata                                                     <  1:2929866/93‑1 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   <  1:4687553/93‑1 (MQ=255)

                                      ttGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtt                                                   >  2:3331113/1‑93 (MQ=255)

                                       tGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttt                                                  <  1:3940199/93‑1 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  2:4294336/93‑1 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  2:3885780/93‑1 (MQ=255)

                                        ggACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAtttt                                                 <  1:1135257/93‑1 (MQ=255)

                                         gACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATAttttt                                                <  2:4494478/93‑1 (MQ=255)

                                          aCTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTc                                               >  1:4632484/1‑93 (MQ=255)

                                           cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt                                              <  2:3027650/93‑1 (MQ=255)

                                           cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCt                                              <  2:487542/93‑1 (MQ=255)

                                           cTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGCGGGTTTATTCCGGCATCACGAATATTTTTCt                                              <  2:3755123/93‑1 (MQ=255)

                                                  ggCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGc                                       <  1:4048702/93‑1 (MQ=255)

                                                   gCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCt                                      >  2:2354612/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    >  1:778980/1‑93 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    <  2:3855829/93‑1 (MQ=255)

                                                     ttACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTAc                                    >  2:2129295/1‑93 (MQ=255)

                                                        cGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGc                                 >  2:1053583/1‑93 (MQ=255)

                                                          tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc                               >  1:2182307/1‑93 (MQ=255)

                                                          tGAGTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCAc                               >  2:2192759/1‑93 (MQ=255)

                                                             gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa                            >  1:2462715/1‑93 (MQ=255)

                                                             gTTATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaa                            >  1:896422/1‑93 (MQ=255)

                                                              ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                           <  1:655136/93‑1 (MQ=255)

                                                              ttATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCaaa                           >  1:2557674/1‑93 (MQ=255)

                                                               tATTCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAAc                          >  2:3177645/1‑93 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        <  1:2842286/93‑1 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        <  2:4237228/93‑1 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        <  2:3702650/93‑1 (MQ=255)

                                                                 ttCGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACaa                        <  2:696253/93‑1 (MQ=255)

                                                                  tCGCTGTAGTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAg                       <  2:4282675/93‑1 (MQ=255)

                                                                   tgttGTATTCTTCCTGGGTACCCCGTGTTTCTTTTGGTGGCTTTATTCGGGCATCACGAATATTTTTCTGCACCGCTACTGCCCCAAACAAGc                      <  2:4326030/90‑1 (MQ=255)

                                                                   cGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGc                      <  1:1298406/93‑1 (MQ=255)

                                                                   cGCTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGc                      <  2:180417/93‑1 (MQ=255)

                                                                     cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt                    >  1:1813034/1‑93 (MQ=255)

                                                                     cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt                    <  1:2886934/93‑1 (MQ=255)

                                                                     cTGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCtt                    >  1:3224137/1‑93 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCTGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   <  1:1569069/93‑1 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  2:545332/1‑93 (MQ=255)

                                                                      tGTATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTa                   >  2:2293827/1‑93 (MQ=255)

                                                                        tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag                 <  1:631949/93‑1 (MQ=255)

                                                                        tATTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaag                 >  2:3462903/1‑93 (MQ=255)

                                                                         aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga                <  1:4608491/93‑1 (MQ=255)

                                                                         aTTCTTCCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaaga                <  2:723716/93‑1 (MQ=255)

                                                                           tcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaag              >  1:2624831/1‑93 (MQ=255)

                                                                           tcttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTaagaag              <  2:264576/93‑1 (MQ=255)

                                                                            cttcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAagaaga             <  2:640393/93‑1 (MQ=255)

                                                                              tcCTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGaaa           <  1:4475753/93‑1 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          <  1:1270848/93‑1 (MQ=255)

                                                                               ccTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAg          <  2:1168032/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         >  1:3134730/1‑93 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         <  2:474240/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         <  1:1875371/93‑1 (MQ=255)

                                                                                cTGGGTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGAACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGc         <  1:3572058/93‑1 (MQ=255)

                                                                                  gggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCa       <  2:2405364/93‑1 (MQ=255)

                                                                                   ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGGACCGCTACTGCACCAAACAAGCTTAAGAAGAAAACCAg      >  1:2947352/1‑93 (MQ=255)

                                                                                   ggTAACCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAg      <  1:1376880/93‑1 (MQ=255)

                                                                                      aaCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTcc   <  2:2016035/93‑1 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  <  1:2168057/93‑1 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  <  1:3893694/93‑1 (MQ=255)

                                                                                       aCCCGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCa  <  2:2514485/93‑1 (MQ=255)

AGAAACAGATTAGTGAGTTAAGTAAAAGCCCGGTCACATTGGACTGACCGGGCTTACGTGAGTTATTCGCTGTATTCTTCCTGGGTAACCTGTGTTTCTTTTGGTGGGTTTATTCCGGCATCACGAATATTTTTCTGCACCGCTACTGCACCAAACAAGCTTAAGAAGAAAGCCAGTCCA  >  NC_000913/3724491‑3724670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`