BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,725,633	T→C	L456L (CTA→CTG)	xylB ←	xylulokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,725,633	0	T	C	100.0%	381.9 / NA	120	L456L (CTA→CTG)	xylB	xylulokinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (88/32); total (88/32)

Only 100 of 126 total aligned reads displayed.

CGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCC  >  NC_000913/3725543‑3725722

cGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAg                                                                                         >  2:723482/1‑93 (MQ=255)

 gTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGa                                                                                        >  2:538422/1‑93 (MQ=255)

 gTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGa                                                                                        <  2:3836300/93‑1 (MQ=255)

 gTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGa                                                                                        >  2:278641/1‑93 (MQ=255)

  tttACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGAt                                                                                       >  2:808977/1‑93 (MQ=255)

  tttACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGAt                                                                                       >  2:2017084/1‑93 (MQ=255)

   ttACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATg                                                                                      >  1:1228670/1‑93 (MQ=255)

   ttACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATg                                                                                      >  2:3347901/1‑93 (MQ=255)

      cGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGa                                                                                   >  1:1138709/1‑93 (MQ=255)

       gCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGAc                                                                                  >  1:1007244/1‑93 (MQ=255)

       gCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGAc                                                                                  >  1:3606428/1‑93 (MQ=255)

       gCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGAc                                                                                  <  1:4418946/93‑1 (MQ=255)

       gCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGAc                                                                                  <  2:3331135/93‑1 (MQ=255)

       gCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGATTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGAc                                                                                  >  1:2326174/1‑93 (MQ=255)

        ccATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATATGGCAGATGCGACt                                                                                 >  2:3317882/1‑93 (MQ=255)

          aTTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGt                                                                               >  2:3035013/1‑93 (MQ=255)

          aTTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGt                                                                               >  2:2719900/1‑93 (MQ=255)

            tAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTc                                                                             <  1:4594080/93‑1 (MQ=255)

            tAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTc                                                                             >  1:1069973/1‑93 (MQ=255)

             aaTGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCt                                                                            >  1:23953/1‑93 (MQ=255)

              aTGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTa                                                                           >  2:3585209/1‑93 (MQ=255)

              aTGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTa                                                                           >  1:434119/1‑93 (MQ=255)

               tGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTaa                                                                          >  1:3006379/1‑93 (MQ=255)

                ggCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAAc                                                                         <  2:4592331/93‑1 (MQ=255)

                  cAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACgg                                                                       >  2:411877/1‑93 (MQ=255)

                    gAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTa                                                                     <  1:545522/93‑1 (MQ=255)

                     aaGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAg                                                                    >  2:2808920/1‑93 (MQ=255)

                          gCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCg                                                               >  1:871726/1‑93 (MQ=255)

                            tGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGc                                                             >  1:2570942/1‑93 (MQ=255)

                            tGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGGAGTTGCGGc                                                             >  2:2571597/1‑93 (MQ=255)

                             gATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGGGACTGTTCTAACGGTAGTTGCGGca                                                            >  2:2594906/1‑93 (MQ=255)

                              aTAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGcaa                                                           >  2:2405023/1‑93 (MQ=255)

                               tAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGcaac                                                          >  1:527868/1‑93 (MQ=255)

                                 gagGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGGGGcaacaa                                                        >  2:1134256/1‑93 (MQ=255)

                                 gagGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGcaacaa                                                        >  2:4282239/1‑93 (MQ=255)

                                  agGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAAt                                                       <  1:395333/93‑1 (MQ=255)

                                  agGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAAt                                                       >  2:3370520/1‑93 (MQ=255)

                                  agGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAAt                                                       <  1:548489/93‑1 (MQ=255)

                                   ggCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAAtt                                                      >  1:3146227/1‑93 (MQ=255)

                                   ggCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCACAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTACTTGCGGcaacaaat                                                      >  1:144428/1‑91 (MQ=255)

                                     cGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCa                                                    >  2:2632394/1‑93 (MQ=255)

                                        cGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATg                                                 <  2:1481909/93‑1 (MQ=255)

                                        cGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATg                                                 <  2:165354/93‑1 (MQ=255)

                                        cGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATg                                                 >  1:2793675/1‑93 (MQ=255)

                                         ggAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGa                                                >  1:2204016/1‑93 (MQ=255)

                                          gAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAg                                               >  1:2784358/1‑93 (MQ=255)

                                          gAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAg                                               >  2:1333584/1‑93 (MQ=255)

                                           aaCGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCCGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGc                                              <  1:633581/93‑1 (MQ=255)

                                            aCGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCg                                             >  1:1756718/1‑93 (MQ=255)

                                            aCGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGGTCTAACGGTAGTTGCCGCGACAAATAAATGaaca                                             >  2:1909770/1‑90 (MQ=255)

                                             cGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGa                                            >  2:779971/1‑93 (MQ=255)

                                              gTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGAt                                           >  1:2746109/1‑93 (MQ=255)

                                               tttCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGAtt                                          <  2:3116824/93‑1 (MQ=255)

                                                ttCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGAttt                                         >  2:4309732/1‑93 (MQ=255)

                                                ttCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGAttt                                         <  1:1981308/93‑1 (MQ=255)

                                                   tcgtcgTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTtctc                                      >  2:1758138/1‑93 (MQ=255)

                                                   tcgtcgTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTtctc                                      >  1:2584967/1‑93 (MQ=255)

                                                   tcgtcgTGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTtctc                                      <  1:1076808/93‑1 (MQ=255)

                                                     gtcgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTg                                    <  1:295619/93‑1 (MQ=255)

                                                     gtcgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTg                                    >  1:2098853/1‑93 (MQ=255)

                                                      tcgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTgg                                   >  2:2469856/1‑93 (MQ=255)

                                                      tcgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTgg                                   <  1:2624798/93‑1 (MQ=255)

                                                       cgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGa                                  <  2:4123938/93‑1 (MQ=255)

                                                       cgtGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGa                                  >  2:4384589/1‑93 (MQ=255)

                                                         tGGCTGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGAtt                                <  2:3473849/93‑1 (MQ=255)

                                                             tGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTcgcc                            >  2:2136572/1‑93 (MQ=255)

                                                             tGATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTcgcc                            >  1:3800308/1‑93 (MQ=255)

                                                              gATAAGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGGTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTcgccg                           >  2:2858300/1‑93 (MQ=255)

                                                                  aGCGGCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGAt                       <  2:482138/93‑1 (MQ=255)

                                                                     ggCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTg                    >  2:3679474/1‑93 (MQ=255)

                                                                      gCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTTGATTCGCCGCGATCTgc                   >  1:1719672/1‑93 (MQ=255)

                                                                      gCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTgc                   >  1:1261940/1‑93 (MQ=255)

                                                                      gCATAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTgc                   <  1:1426600/93‑1 (MQ=255)

                                                                        aTAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTgcgc                 >  2:518761/1‑93 (MQ=255)

                                                                        aTAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTgcgc                 >  1:4490161/1‑93 (MQ=255)

                                                                         tAACGCTGCGGATCCTGCAGATGCGACTGTTCTAACGGCAGGTGCGGCAACAATTCAATGAGCGATTTCTCTGTATTCGCCGCGATCTGCGcc                >  2:2949598/1‑93 (MQ=255)

                                                                         tAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGcc                >  2:179144/1‑93 (MQ=255)

                                                                         tAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGcc                >  2:2329413/1‑93 (MQ=255)

                                                                         tAACGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGcc                <  1:2090477/93‑1 (MQ=255)

                                                                          aaCGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCa               >  2:553208/1‑93 (MQ=255)

                                                                          aaCGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCa               >  2:1229515/1‑93 (MQ=255)

                                                                           aCGCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAg              >  1:616782/1‑93 (MQ=255)

                                                                             gCTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGcc            >  1:4287051/1‑93 (MQ=255)

                                                                              cTGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCt           <  1:117893/93‑1 (MQ=255)

                                                                               tGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCtt          <  1:1903663/93‑1 (MQ=255)

                                                                               tGCGCATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCtt          >  2:2500819/1‑93 (MQ=255)

                                                                                gcgcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtg         >  1:3722403/1‑93 (MQ=255)

                                                                                 cgcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgc        >  2:1912256/1‑93 (MQ=255)

                                                                                 cgcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgc        >  1:944218/1‑93 (MQ=255)

                                                                                 cgcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgc        <  1:462016/93‑1 (MQ=255)

                                                                                 cgcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgc        <  1:2192289/93‑1 (MQ=255)

                                                                                  gcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgct       >  2:3670122/1‑93 (MQ=255)

                                                                                  gcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgct       >  2:2856335/1‑93 (MQ=255)

                                                                                  gcATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgct       >  2:157796/1‑93 (MQ=255)

                                                                                   cATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgctg      >  1:1125906/1‑93 (MQ=255)

                                                                                   cATCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgctg      <  1:2489177/93‑1 (MQ=255)

                                                                                    aTCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgctgc     >  2:3888134/1‑93 (MQ=255)

                                                                                    aTCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTtgctgc     <  1:4065557/93‑1 (MQ=255)

                                                                                     tCTGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTgcg    >  1:785617/1‑93 (MQ=255)

                                                                                       tGGCAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGcc  >  1:4365218/1‑93 (MQ=255)

CGTTTACGCCATTAATGGCAGAAGTTGCTGATAGAGGCGACGGAACGTTTCTCGTCGTGGCTGATAAGCGGCATAACGCTGCGCATCTGGTAGATGCGACTGTTCTAACGGTAGTTGCGGCAACAATTCAATGAGCGATTTCTCTGGATTCGCCGCGATCTGCGCCAGCCTTGCTGCGCC  >  NC_000913/3725543‑3725722

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`