BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,774,290	A→G	intergenic (‑283/‑2)	b4550 ← / → yibL	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,774,290	0	A	G	100.0%	629.2 / NA	197	intergenic (‑283/‑2)	b4550/yibL	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (129/68); total (129/68)

Only 100 of 199 total aligned reads displayed.

TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG  >  NC_000913/3774200‑3774379

ttACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATcgca                                                                                         <  1:82751/93‑1 (MQ=255)

   cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa                                                                                      <  2:3907299/93‑1 (MQ=255)

   cAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGa                                                                                      >  1:1907313/1‑93 (MQ=255)

     gAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGaaa                                                                                    >  2:3427039/1‑93 (MQ=255)

        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGCAGCCATCGCATGAaagaa                                                                                 >  2:1259980/1‑93 (MQ=255)

        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                 <  1:4244252/93‑1 (MQ=255)

        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                 >  2:1671684/1‑93 (MQ=255)

        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                 <  2:560801/93‑1 (MQ=255)

        cTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaa                                                                                 <  1:1277443/93‑1 (MQ=255)

         tATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAaagaag                                                                                >  1:4155953/1‑93 (MQ=255)

          aTTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGt                                                                               >  2:1346010/1‑93 (MQ=255)

           ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc                                                                              <  2:1934462/93‑1 (MQ=255)

           ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc                                                                              <  1:2560051/93‑1 (MQ=255)

           ttACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTc                                                                              <  1:4576479/93‑1 (MQ=255)

             aCAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGa                                                                            <  1:116982/93‑1 (MQ=255)

              cAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaa                                                                           >  1:2240729/1‑93 (MQ=255)

                aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa                                                                         >  2:1482698/1‑93 (MQ=255)

                aTGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaa                                                                         >  1:605340/1‑93 (MQ=255)

                 tGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaa                                                                        >  1:585981/1‑93 (MQ=255)

                  gTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGaaaaaa                                                                       >  1:4475134/1‑93 (MQ=255)

                    cATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAAc                                                                     >  2:3720078/1‑93 (MQ=255)

                      ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa                                                                   >  2:755803/1‑93 (MQ=255)

                      ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa                                                                   >  2:462897/1‑93 (MQ=255)

                      ttAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGa                                                                   <  2:2479166/93‑1 (MQ=255)

                      ttAGTTGTGAACAAAGCACCTGGGCTCGCATACTAGTGGCTATTTATTTATCCTGATCAGAAGCCATCGCATGAAAGGAGGCGAAAAAAACGa                                                                   >  2:1424352/1‑93 (MQ=255)

                       tAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaa                                                                  >  1:3691874/1‑93 (MQ=255)

                        aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa                                                                 >  2:1603209/1‑93 (MQ=255)

                        aGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGaaa                                                                 <  2:2445318/93‑1 (MQ=255)

                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                >  2:1288179/1‑93 (MQ=255)

                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                >  2:831432/1‑93 (MQ=255)

                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                <  1:1458973/93‑1 (MQ=255)

                         gTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAAt                                                                <  2:4442528/93‑1 (MQ=255)

                          ttGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATc                                                               <  2:2980120/93‑1 (MQ=255)

                            gtgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaa                                                             >  2:1999661/1‑93 (MQ=255)

                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                            <  1:3750069/93‑1 (MQ=255)

                             tgAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCaaa                                                            <  1:1482949/93‑1 (MQ=255)

                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           >  1:89331/1‑93 (MQ=255)

                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           >  1:3306515/1‑93 (MQ=255)

                              gAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAAc                                                           >  2:3232643/1‑93 (MQ=255)

                                aCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGc                                                         >  2:1470988/1‑93 (MQ=255)

                                aCAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATAGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGc                                                         >  2:1566569/1‑93 (MQ=255)

                                 cAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGcc                                                        <  2:2922526/93‑1 (MQ=255)

                                  aaaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCt                                                       <  1:1343294/93‑1 (MQ=255)

                                   aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc                                                      >  2:3074629/1‑93 (MQ=255)

                                   aaGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTc                                                      <  2:3323911/93‑1 (MQ=255)

                                    aGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCa                                                     <  1:2050819/93‑1 (MQ=255)

                                     gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                    <  2:2506553/93‑1 (MQ=255)

                                     gCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAg                                                    >  2:2676264/1‑93 (MQ=255)

                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                   <  1:2766414/93‑1 (MQ=255)

                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                   <  1:3634423/93‑1 (MQ=255)

                                      cACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGc                                                   >  2:1408674/1‑93 (MQ=255)

                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                  >  2:487648/1‑93 (MQ=255)

                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                  >  2:92996/1‑93 (MQ=255)

                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                  >  1:934859/1‑93 (MQ=255)

                                       aCCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCg                                                  >  1:3446810/1‑93 (MQ=255)

                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                 >  2:670007/1‑93 (MQ=255)

                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                 <  2:4036367/93‑1 (MQ=255)

                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                 >  1:2640091/1‑93 (MQ=255)

                                        ccTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGa                                                 >  1:3956920/1‑93 (MQ=255)

                                         cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt                                                >  1:2753519/1‑93 (MQ=255)

                                         cTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGAt                                                >  2:3217368/1‑93 (MQ=255)

                                          tGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATc                                               <  2:451175/93‑1 (MQ=255)

                                           ggTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCg                                              <  2:3604580/93‑1 (MQ=255)

                                             tCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGcc                                            >  1:2396177/1‑93 (MQ=255)

                                              cgcgCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCt                                           >  2:4405432/1‑93 (MQ=255)

                                                   aTACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACg                                      >  2:2363945/1‑93 (MQ=255)

                                                    tACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGc                                     <  2:1892641/93‑1 (MQ=255)

                                                       tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt                                  >  1:1008364/1‑93 (MQ=255)

                                                       tAGGGGCTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCAt                                  >  2:1784659/1‑93 (MQ=255)

                                                             cTATAAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGcca                            >  2:2307152/1‑93 (MQ=255)

                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                           <  2:429383/93‑1 (MQ=255)

                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                           >  1:384943/1‑93 (MQ=255)

                                                              tataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccac                           >  1:3902672/1‑93 (MQ=255)

                                                               ataAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacc                          >  2:3883278/1‑93 (MQ=255)

                                                                taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         >  1:1124141/1‑93 (MQ=255)

                                                                taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         <  2:4586484/93‑1 (MQ=255)

                                                                taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         <  1:2844697/93‑1 (MQ=255)

                                                                taAATTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGccacca                         <  2:3384136/93‑1 (MQ=255)

                                                                  aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc                       >  1:4006863/1‑93 (MQ=255)

                                                                  aaTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagc                       <  2:1150515/93‑1 (MQ=255)

                                                                   aTTTATCTTTATCAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACcagca                      >  2:2208807/1‑93 (MQ=255)

                                                                      tatctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGc                   >  2:3941688/1‑93 (MQ=255)

                                                                       atctttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGcc                  <  1:588942/93‑1 (MQ=255)

                                                                          tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt               >  1:3662141/1‑93 (MQ=255)

                                                                          tttatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGAt               <  1:2063294/93‑1 (MQ=255)

                                                                            tatcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCt             <  2:3632202/93‑1 (MQ=255)

                                                                             atcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCtt            >  1:1827071/1‑93 (MQ=255)

                                                                              tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt           >  1:1606378/1‑93 (MQ=255)

                                                                              tcAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCttt           <  2:2026537/93‑1 (MQ=255)

                                                                               cAGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTc          <  1:3612602/93‑1 (MQ=255)

                                                                                aGAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTcc         >  1:2425428/1‑92 (MQ=255)

                                                                                 gAAGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGc        >  1:497345/1‑93 (MQ=255)

                                                                                  aaGCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCt       >  2:314668/1‑93 (MQ=255)

                                                                                    gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg     >  2:3013878/1‑93 (MQ=255)

                                                                                    gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg     >  2:4070916/1‑93 (MQ=255)

                                                                                    gCCATCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTgg     <  1:2610771/93‑1 (MQ=255)

                                                                                       aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg  >  1:1598316/1‑93 (MQ=255)

                                                                                       aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg  >  1:4337615/1‑93 (MQ=255)

                                                                                       aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg  >  1:3565062/1‑93 (MQ=255)

                                                                                       aTCGCATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTg  >  1:104277/1‑93 (MQ=255)

TTACAGAACTATTACAATGTCATTAGTTGTGAACAAAGCACCTGGTCGCGCATACTAGGGGCTATAAATTTATCTTTATCAGAAGCCATCACATGAAAGAAGTCGAAAAAAACGAAATCAAACGCCTCAGCGATCGCCTGGACGCCATCCGCCACCAGCAGGCCGATCTTTCGCTGGTTG  >  NC_000913/3774200‑3774379

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`