BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,791,507	T→C	intergenic (‑182/‑107)	htrL ← / → rfaD	HtrL/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,791,507	0	T	C	100.0%	566.6 / NA	177	intergenic (‑182/‑107)	htrL/rfaD	HtrL/ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (162/15); total (162/15)

Only 100 of 181 total aligned reads displayed.

AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATA  >  NC_000913/3791417‑3791596

 atatTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCt                                                                                        >  1:3223879/1‑93 (MQ=255)

 atatTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCt                                                                                        >  1:1695662/1‑93 (MQ=255)

   atTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTg                                                                                      >  1:2310048/1‑93 (MQ=255)

    ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGc                                                                                     >  1:2130485/1‑93 (MQ=255)

    ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGc                                                                                     <  1:4300049/93‑1 (MQ=255)

    ttGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTCCATTTAGAACCCTTGc                                                                                     >  1:3181394/1‑93 (MQ=255)

     tGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCAGCCTTGCa                                                                                    >  2:4454100/1‑93 (MQ=255)

       aTACTAAAGCACTATTCACGTGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCAcc                                                                                  >  2:4585153/1‑93 (MQ=255)

       aTACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCAcc                                                                                  <  1:3007865/93‑1 (MQ=255)

        tACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACTCTTGCACct                                                                                 >  1:1157361/1‑93 (MQ=255)

           tAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTa                                                                              <  2:2783619/93‑1 (MQ=255)

           tAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTa                                                                              >  1:1213299/1‑93 (MQ=255)

              aGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGt                                                                           >  2:2763779/1‑93 (MQ=255)

                cACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaa                                                                         >  2:2301505/1‑93 (MQ=255)

                cACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaa                                                                         >  2:656607/1‑93 (MQ=255)

                 aCTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTaaa                                                                        >  2:4035126/1‑93 (MQ=255)

                  cTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAg                                                                       >  1:4502439/1‑93 (MQ=255)

                  cTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAg                                                                       >  2:935148/1‑93 (MQ=255)

                   tATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAgg                                                                      >  1:3908238/1‑93 (MQ=255)

                    aTTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAggg                                                                     >  1:96906/1‑93 (MQ=255)

                     ttCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGc                                                                    >  1:548219/1‑93 (MQ=255)

                      tCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCt                                                                   >  2:2103954/1‑93 (MQ=255)

                         caTGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGaa                                                                >  1:393024/1‑93 (MQ=255)

                               aaaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGAtt                                                          >  1:1928126/1‑93 (MQ=255)

                                aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc                                                         >  2:3262281/1‑93 (MQ=255)

                                aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc                                                         >  2:2882197/1‑93 (MQ=255)

                                aaCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTc                                                         >  1:3232532/1‑93 (MQ=255)

                                 aCCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCg                                                        <  1:1253021/93‑1 (MQ=255)

                                   cAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGa                                                      >  2:2569141/1‑93 (MQ=255)

                                   cAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGa                                                      >  1:2226370/1‑93 (MQ=255)

                                    aaCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAt                                                     >  2:3730409/1‑93 (MQ=255)

                                     aCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtg                                                    >  1:3483649/1‑93 (MQ=255)

                                     aCATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtg                                                    >  1:3394443/1‑93 (MQ=255)

                                       aTCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGAtgtg                                                  >  2:1520972/1‑93 (MQ=255)

                                        tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa                                                 >  1:1774005/1‑93 (MQ=255)

                                        tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa                                                 >  1:1101866/1‑93 (MQ=255)

                                        tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa                                                 >  2:3531137/1‑93 (MQ=255)

                                        tCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGa                                                 >  2:3954640/1‑93 (MQ=255)

                                         ccGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGAt                                                >  1:1946390/1‑93 (MQ=255)

                                           gCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATgg                                              >  2:1981589/1‑93 (MQ=255)

                                            ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGt                                             >  2:3162339/1‑93 (MQ=255)

                                            ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGt                                             >  1:2599545/1‑93 (MQ=255)

                                            ccATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATCAGCACCCTTGCACCTCTATCTAAAGGGCTGAAGGGATTCGGATGTGATggg                                             >  1:1542526/1‑92 (MQ=255)

                                             cATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTa                                            >  1:3922036/1‑93 (MQ=255)

                                              aTGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTAt                                           >  2:3395997/1‑93 (MQ=255)

                                               tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg                                          >  1:4466262/1‑93 (MQ=255)

                                               tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg                                          >  1:1722803/1‑93 (MQ=255)

                                               tGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATg                                          >  1:504638/1‑93 (MQ=255)

                                                 aaGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAt                                        >  1:2116533/1‑93 (MQ=255)

                                                  aGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAtt                                       >  2:4335471/1‑93 (MQ=255)

                                                  aGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGAtt                                       >  2:1284663/1‑93 (MQ=255)

                                                    gACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTAc                                     >  2:20186/1‑93 (MQ=255)

                                                      cTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAg                                   >  2:3269455/1‑93 (MQ=255)

                                                        aGCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGAc                                 >  2:3757324/1‑93 (MQ=255)

                                                         gCTAAAACCCAAACTAGTTTGTTGCAATTAGCACCGTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACa                                >  1:3376313/1‑93 (MQ=255)

                                                           tAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt                              >  1:4394029/1‑93 (MQ=255)

                                                           tAAAACCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACAtt                              >  1:4636805/1‑93 (MQ=255)

                                                            aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc                             <  1:3847923/93‑1 (MQ=255)

                                                            aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc                             >  1:4545689/1‑93 (MQ=255)

                                                            aaaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTc                             >  2:2129070/1‑93 (MQ=255)

                                                             aaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCg                            >  2:134537/1‑93 (MQ=255)

                                                             aaaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCg                            >  1:1361684/1‑93 (MQ=255)

                                                              aaCCCAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgt                           >  2:4446086/1‑93 (MQ=255)

                                                                cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                         <  2:1450540/93‑1 (MQ=255)

                                                                cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                         >  1:3746153/1‑93 (MQ=255)

                                                                cccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCgtgt                         >  2:1743104/1‑93 (MQ=255)

                                                                 ccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTc                        >  2:457252/1‑93 (MQ=255)

                                                                 ccAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTc                        >  2:2929869/1‑93 (MQ=255)

                                                                  cAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCt                       >  2:4024847/1‑93 (MQ=255)

                                                                  cAAACTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCt                       >  2:3627244/1‑93 (MQ=255)

                                                                   aaaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTg                      >  1:1558830/1‑93 (MQ=255)

                                                                    aaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTga                     >  2:1645075/1‑93 (MQ=255)

                                                                    aaCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTga                     >  2:3873704/1‑93 (MQ=255)

                                                                     aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag                    >  1:707889/1‑93 (MQ=255)

                                                                     aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag                    >  1:3253524/1‑93 (MQ=255)

                                                                     aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag                    >  1:2902957/1‑93 (MQ=255)

                                                                     aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag                    >  1:4417960/1‑93 (MQ=255)

                                                                     aCTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgag                    <  1:4000942/93‑1 (MQ=255)

                                                                      cTAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTgaga                   <  2:136922/93‑1 (MQ=255)

                                                                       tAGTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGAt                  >  2:736148/1‑93 (MQ=255)

                                                                         gTTTGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCAGAAGGGTTTCGGATGGGAGGGTATGATGATAGACATTCGTGTCTGAGAtag                >  2:4685625/1‑91 (MQ=255)

                                                                          tttGTTGCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGt               >  1:2628309/1‑93 (MQ=255)

                                                                           tttttgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGtc              <  1:3560937/90‑1 (MQ=255)

                                                                            tgttgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGtct             >  2:213317/1‑93 (MQ=255)

                                                                               tgCAATTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTg          >  2:848335/1‑93 (MQ=255)

                                                                                  aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt       >  2:327832/1‑93 (MQ=255)

                                                                                  aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt       >  2:4046605/1‑93 (MQ=255)

                                                                                  aaTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACt       >  2:2055724/1‑93 (MQ=255)

                                                                                   aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTGTGACTc      >  2:2479531/1‑93 (MQ=255)

                                                                                   aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTc      >  2:1394182/1‑93 (MQ=255)

                                                                                   aTTAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTc      >  1:465792/1‑93 (MQ=255)

                                                                                    ttAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTcc     >  1:4227892/1‑93 (MQ=255)

                                                                                     tAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCa    <  2:2122587/93‑1 (MQ=255)

                                                                                     tAGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCa    <  2:1159296/93‑1 (MQ=255)

                                                                                      aGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCAt   >  1:941016/1‑93 (MQ=255)

                                                                                      aGCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCAt   >  2:4272905/1‑93 (MQ=255)

                                                                                       gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa  >  2:441078/1‑93 (MQ=255)

                                                                                       gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa  >  2:1662800/1‑93 (MQ=255)

                                                                                       gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATa  >  2:3293454/1‑93 (MQ=255)

                                                                                       gCACCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGGCTGAGATTGTCTCTGACTCCATa  >  2:523945/1‑93 (MQ=255)

AATATTGATACTAAAGCACTATTCACATGCAAAACCAACATCCGCCATGAAGGACTAGCTAAAACCCAAACTAGTTTGTTGCAATTAGCATCCTTGCACCTCTATGTAAAGGGCTGAAGGGATTCGGATGTGATGGTATGATTACAGACATTCGTGTCTGAGATTGTCTCTGACTCCATA  >  NC_000913/3791417‑3791596

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`