BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,804,224	A→G	T157T (ACT→ACC)	rfaG ←	glucosyltransferase I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,804,224	0	A	G	100.0%	512.8 / NA	164	T157T (ACT→ACC)	rfaG	glucosyltransferase I
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (89/75); total (89/75)

Only 100 of 182 total aligned reads displayed.

GCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC  >  NC_000913/3804134‑3804313

gCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGt                                                                                         <  1:424134/93‑1 (MQ=255)

gCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGt                                                                                         <  1:100027/93‑1 (MQ=255)

  gATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGttt                                                                                       >  1:4033908/1‑93 (MQ=255)

  gATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGttt                                                                                       >  1:275852/1‑93 (MQ=255)

   aTAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTg                                                                                      >  1:2465825/1‑93 (MQ=255)

   aTAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTg                                                                                      >  1:2161159/1‑93 (MQ=255)

    tAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGa                                                                                     >  2:1034227/1‑93 (MQ=255)

    tAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAAAGTTCAGGTTCGGTTTGa                                                                                     <  1:336344/93‑1 (MQ=255)

      aaTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATa                                                                                   >  2:2948252/1‑93 (MQ=255)

       aTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATaa                                                                                  <  1:4540099/93‑1 (MQ=255)

       aTTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATaa                                                                                  >  2:1668988/1‑93 (MQ=255)

        tttCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAAt                                                                                 >  1:4224995/1‑93 (MQ=255)

          tCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGc                                                                               >  2:2609265/1‑93 (MQ=255)

          tCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGc                                                                               <  2:1745959/93‑1 (MQ=255)

           cACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCt                                                                              <  1:2031540/93‑1 (MQ=255)

           cACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCt                                                                              <  2:4008452/93‑1 (MQ=255)

             cGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTc                                                                            <  1:3236210/93‑1 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCt                                                                           <  1:4441466/93‑1 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCt                                                                           >  1:3380227/1‑93 (MQ=255)

              ggCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCt                                                                           <  2:701052/93‑1 (MQ=255)

               gCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTg                                                                          >  1:1635534/1‑93 (MQ=255)

               gCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTg                                                                          >  2:1892432/1‑93 (MQ=255)

                cTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTgg                                                                         >  2:4685066/1‑93 (MQ=255)

                 tGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGa                                                                        >  2:4206582/1‑93 (MQ=255)

                 tGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGa                                                                        >  1:1434927/1‑93 (MQ=255)

                    ttGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAAt                                                                     <  2:3065047/93‑1 (MQ=255)

                     tGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATc                                                                    <  2:4650450/93‑1 (MQ=255)

                         aTTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCg                                                                >  2:4332771/1‑93 (MQ=255)

                          tttGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGa                                                               >  1:2370607/1‑93 (MQ=255)

                          tttGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGa                                                               >  1:530888/1‑93 (MQ=255)

                          tttGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGa                                                               >  1:4251454/1‑93 (MQ=255)

                             gCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGAttt                                                            >  2:554488/1‑93 (MQ=255)

                              cTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTg                                                           <  2:966763/93‑1 (MQ=255)

                               tCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGc                                                          >  1:63613/1‑93 (MQ=255)

                                 aCTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCtt                                                        >  1:3569481/1‑93 (MQ=255)

                                 aCTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCtt                                                        >  2:2034666/1‑93 (MQ=255)

                                  cTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTa                                                       >  1:3996426/1‑93 (MQ=255)

                                   tGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAt                                                      >  1:4074000/1‑93 (MQ=255)

                                   tGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTAt                                                      <  2:1369496/93‑1 (MQ=255)

                                    gTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATc                                                     <  2:368320/93‑1 (MQ=255)

                                    gTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATc                                                     <  2:1215283/93‑1 (MQ=255)

                                    gTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATc                                                     <  2:1863434/93‑1 (MQ=255)

                                      aTTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCgg                                                   >  2:388228/1‑93 (MQ=255)

                                           cTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGc                                              >  2:436245/1‑93 (MQ=255)

                                            tGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGca                                             >  2:4252871/1‑93 (MQ=255)

                                            tGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGca                                             >  1:4148288/1‑93 (MQ=255)

                                            tGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGATCAGGTTCGGCTTGATAATGCTTCTGGAAATCGGCGAATTGCTTATCGGTCAGca                                             >  2:3317374/1‑93 (MQ=255)

                                              tCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatc                                           <  2:187076/93‑1 (MQ=255)

                                               ccGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatca                                          <  1:2996186/93‑1 (MQ=255)

                                               ccGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatca                                          <  1:1649206/93‑1 (MQ=255)

                                                cGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatcat                                         >  1:2543870/1‑93 (MQ=255)

                                                cGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGcatcat                                         <  2:4658343/93‑1 (MQ=255)

                                                 ggATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATa                                        >  1:2789720/1‑93 (MQ=255)

                                                 ggATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATa                                        <  1:3547384/93‑1 (MQ=255)

                                                 ggATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATa                                        >  2:2998318/1‑93 (MQ=255)

                                                 ggATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATa                                        <  2:850619/93‑1 (MQ=255)

                                                   aTAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAg                                      >  2:3590565/1‑93 (MQ=255)

                                                    tAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGt                                     <  2:1705478/93‑1 (MQ=255)

                                                      aaTACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGttt                                   >  1:2138688/1‑93 (MQ=255)

                                                       aTACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtc                                  >  1:1419441/1‑93 (MQ=255)

                                                        tACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcg                                 >  1:771751/1‑93 (MQ=255)

                                                         aCCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgt                                <  2:3579077/93‑1 (MQ=255)

                                                         aCCGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgt                                <  2:432178/93‑1 (MQ=255)

                                                          ccGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtc                               <  1:2682035/93‑1 (MQ=255)

                                                           cGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtcg                              >  2:3458471/1‑93 (MQ=255)

                                                           cGGGAGGAAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTtcgtcg                              >  2:2788761/1‑93 (MQ=255)

                                                              gaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAtt                           <  1:3067599/93‑1 (MQ=255)

                                                              gaggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGAtt                           <  1:1254226/93‑1 (MQ=255)

                                                                ggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTa                         >  2:4389728/1‑93 (MQ=255)

                                                                ggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTa                         >  2:1265452/1‑93 (MQ=255)

                                                                ggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTa                         <  1:2296734/93‑1 (MQ=255)

                                                                ggaAGAATTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTa                         >  2:1355715/1‑93 (MQ=255)

                                                                 gaagaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAc                        >  1:4323607/1‑93 (MQ=255)

                                                                 gaagaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAc                        >  1:6436/1‑93 (MQ=255)

                                                                 gaagaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAc                        >  2:1534860/1‑93 (MQ=255)

                                                                 gaagaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAc                        >  1:743439/1‑93 (MQ=255)

                                                                   agaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTAccc                      <  1:4040245/93‑1 (MQ=255)

                                                                    gaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCt                     >  1:1348733/1‑93 (MQ=255)

                                                                    aaaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCt                     <  1:107190/92‑1 (MQ=255)

                                                                     aaTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTg                    >  2:1306666/1‑93 (MQ=255)

                                                                      aTTTGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGc                   <  2:3857541/93‑1 (MQ=255)

                                                                       tttGAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCt                  >  1:1858397/1‑93 (MQ=255)

                                                                          gAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGa               <  2:1582318/93‑1 (MQ=255)

                                                                          gAAAACGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGa               <  2:2323171/93‑1 (MQ=255)

                                                                            aaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaaa             <  2:2465825/93‑1 (MQ=255)

                                                                            aaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaaa             >  1:1739194/1‑93 (MQ=255)

                                                                            aaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaaa             <  1:2192135/93‑1 (MQ=255)

                                                                            aaaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGaaa             >  1:2411465/1‑93 (MQ=255)

                                                                             aaCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAg            <  1:3767943/93‑1 (MQ=255)

                                                                              aCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGt           <  2:4342818/93‑1 (MQ=255)

                                                                              aCGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGt           >  2:4133694/1‑93 (MQ=255)

                                                                               cGTTCAGGTTCGGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtc          <  2:298924/93‑1 (MQ=255)

                                                                                gttcaggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcg         >  2:1524367/1‑93 (MQ=255)

                                                                                   caggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctc      <  1:1139155/93‑1 (MQ=255)

                                                                                   caggttcggTTTAATAATGCTTCTGGAAATCTGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctc      <  2:3595502/93‑1 (MQ=255)

                                                                                     ggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctcgc    >  2:4589578/1‑93 (MQ=255)

                                                                                     ggttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGtcgctcgc    >  1:2202940/1‑93 (MQ=255)

                                                                                      gttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTcgctcgct   >  2:2915717/1‑93 (MQ=255)

                                                                                       ttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCgctcgctc  <  2:2421570/93‑1 (MQ=255)

                                                                                       ttcggTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCgctcgctc  >  2:1481484/1‑93 (MQ=255)

GCGATAAATTTCACGGCTGTTTGGGATTTGCTCACTGTATTTTCTGTCCGGATAAATACCGGGAGGAAGAATTTGAAAACGTTCAGGTTCAGTTTGATAATGCTTCTGGAAATCGGCGATTTGCTTATCGGTCAGCATCATAAGTTTCGTCGATTTACCCTGCTCGAAAGTCGCTCGCTC  >  NC_000913/3804134‑3804313

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`