Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,812,035 G→A intergenic (+21/‑86) dut → / → b3641 deoxyuridinetriphosphatase/putative transcriptional regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,812,0350GA99.3% 970.3 / ‑5.5 269intergenic (+21/‑86)dut/b3641deoxyuridinetriphosphatase/putative transcriptional regulator
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base A (118/149);  total (118/151)
Fisher's exact test for biased strand distribution p-value = 5.06e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

TAATCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACGTCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACATGG  >  NC_000913/3811945‑3812124
                                                                                          |                                                                                         
 aaTCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCa                                                                                        <  2:2209460/93‑1 (MQ=255)
 aaTCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCa                                                                                        >  1:2045932/1‑93 (MQ=255)
 aaTCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCa                                                                                        <  2:4379178/93‑1 (MQ=255)
  aTCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAAcatcat                                                                                       <  1:1523237/93‑1 (MQ=255)
   tCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATa                                                                                      >  2:2740856/1‑93 (MQ=255)
       gtggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACAt                                                                                  <  2:1401277/93‑1 (MQ=255)
       gtggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACAt                                                                                  <  1:3115674/93‑1 (MQ=255)
       gtggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTGGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACAt                                                                                  <  1:3364617/93‑1 (MQ=255)
        tggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATa                                                                                 <  2:716384/93‑1 (MQ=255)
        tggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATa                                                                                 >  2:4069487/1‑93 (MQ=255)
        tggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATa                                                                                 >  2:2374070/1‑93 (MQ=255)
        gggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATa                                                                                 <  1:928069/92‑1 (MQ=255)
         ggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAg                                                                                >  1:3793321/1‑93 (MQ=255)
         ggAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAg                                                                                >  2:1597726/1‑93 (MQ=255)
             gATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGc                                                                            <  1:1085033/93‑1 (MQ=255)
             gATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGc                                                                            >  1:2469580/1‑93 (MQ=255)
             aaTTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGc                                                                            <  2:1906120/92‑1 (MQ=255)
              aTTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCa                                                                           <  1:3201222/93‑1 (MQ=255)
               tttCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCaa                                                                          <  2:2438187/93‑1 (MQ=255)
               tttCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCaa                                                                          >  1:3036669/1‑93 (MQ=255)
               tttCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCaa                                                                          >  2:432852/1‑93 (MQ=255)
                 tCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAAc                                                                        <  2:3608494/93‑1 (MQ=255)
                   gACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACAt                                                                      >  2:3046788/1‑93 (MQ=255)
                    aCGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACAtt                                                                     >  1:4565995/1‑93 (MQ=255)
                    aCGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACAtt                                                                     <  2:4347946/93‑1 (MQ=255)
                      gCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTc                                                                   <  2:2500583/93‑1 (MQ=255)
                      gCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTc                                                                   >  2:1744843/1‑93 (MQ=255)
                      gCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTc                                                                   <  1:3684006/93‑1 (MQ=255)
                        cACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGt                                                                 <  1:2837243/93‑1 (MQ=255)
                        cACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCAGCAAACATTTCGt                                                                 >  1:206617/1‑93 (MQ=255)
                         accgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGtt                                                                <  2:3102059/93‑1 (MQ=255)
                         accgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGtt                                                                >  2:2711939/1‑93 (MQ=255)
                         accgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGtt                                                                >  2:95873/1‑93 (MQ=255)
                         accgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGtt                                                                <  2:214436/93‑1 (MQ=255)
                          ccgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGttt                                                               <  2:2284785/93‑1 (MQ=255)
                          ccgaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGttt                                                               <  2:207335/93‑1 (MQ=255)
                            gaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGc                                                             >  2:4049066/1‑93 (MQ=255)
                            gaccgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGc                                                             >  2:4630280/1‑93 (MQ=255)
                             accgCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCg                                                            >  2:4226012/1‑93 (MQ=255)
                                 cgGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCa                                                        <  2:4198441/93‑1 (MQ=255)
                                 cgGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCa                                                        >  2:1994394/1‑93 (MQ=255)
                                   gTGAAGGCGGCTTTGGTCGCTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATa                                                      <  1:1689700/93‑1 (MQ=255)
                                   gTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATa                                                      <  1:355652/93‑1 (MQ=255)
                                   gTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATa                                                      <  1:3458257/93‑1 (MQ=255)
                                   gTGAAGGCGACTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATa                                                      >  2:1740920/1‑93 (MQ=255)
                                    tGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAg                                                     <  2:2316772/93‑1 (MQ=255)
                                    tGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAg                                                     <  1:1105160/93‑1 (MQ=255)
                                     gAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGc                                                    <  1:3496141/93‑1 (MQ=255)
                                     gAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGc                                                    <  1:2267099/93‑1 (MQ=255)
                                       aGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGt                                                  >  2:3214865/1‑93 (MQ=255)
                                         gcggcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTgg                                                <  1:3161142/93‑1 (MQ=255)
                                         gcggcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTgg                                                <  1:1715601/93‑1 (MQ=255)
                                         gcggcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTgg                                                <  1:1936602/93‑1 (MQ=255)
                                          cggcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTggg                                               <  2:4367848/93‑1 (MQ=255)
                                            gcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTg                                             >  1:4681184/1‑93 (MQ=255)
                                            gcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTg                                             >  2:3560908/1‑93 (MQ=255)
                                            gcTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTg                                             >  2:3843805/1‑93 (MQ=255)
                                             cTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTgc                                            >  1:1319772/1‑93 (MQ=255)
                                             cTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTgc                                            >  2:3254763/1‑93 (MQ=255)
                                              tttGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTgcc                                           <  2:1082607/93‑1 (MQ=255)
                                               ttGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTgccg                                          >  1:2937320/1‑93 (MQ=255)
                                                 ggTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTgccgcc                                        <  1:3155247/93‑1 (MQ=255)
                                                   tCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTg                                      <  1:4484332/93‑1 (MQ=255)
                                                     aCTCTGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGc                                    >  1:1466394/1‑93 (MQ=255)
                                                        ctGGTCGTCAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAg                                 <  2:1946157/93‑1 (MQ=255)
                                                               tcAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAt                          <  1:4015938/93‑1 (MQ=255)
                                                               tcAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAt                          >  1:792305/1‑93 (MQ=255)
                                                               tcAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAt                          >  2:3249631/1‑93 (MQ=255)
                                                               tcAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAt                          <  2:2613613/93‑1 (MQ=255)
                                                                cAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAtt                         <  1:411378/93‑1 (MQ=255)
                                                                cAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAtt                         <  1:1366433/93‑1 (MQ=255)
                                                                cAGTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAtt                         <  2:3140524/93‑1 (MQ=255)
                                                                  gTAACACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTAtttt                       >  2:1016218/1‑93 (MQ=255)
                                                                    aaCACATACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCa                     <  1:347161/93‑1 (MQ=255)
                                                                       acaTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAggg                  >  1:1418066/1‑93 (MQ=255)
                                                                       acaTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAggg                  >  1:3317424/1‑93 (MQ=255)
                                                                        caTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAgggg                 <  2:1453373/93‑1 (MQ=255)
                                                                        caTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAgggg                 <  2:514556/93‑1 (MQ=255)
                                                                         aTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGt                <  1:71029/93‑1 (MQ=255)
                                                                         aTACGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGt                >  1:21182/1‑93 (MQ=255)
                                                                           aCGCATCCGAATAACGTCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAt              <  1:230899/93‑1 (MQ=255)
                                                                           aCGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAt              <  2:2567166/93‑1 (MQ=255)
                                                                           aCGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAt              >  2:3271110/1‑93 (MQ=255)
                                                                           aCGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAt              <  1:406464/93‑1 (MQ=255)
                                                                            cGCATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAtt             <  2:1052569/93‑1 (MQ=255)
                                                                              cATCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTAtttt           >  1:2316998/1‑93 (MQ=255)
                                                                               aTCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTg          >  1:1626478/1‑93 (MQ=255)
                                                                                tCCGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGt         <  2:3415043/93‑1 (MQ=255)
                                                                                 ccGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTa        <  2:2823758/93‑1 (MQ=255)
                                                                                  cGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTaa       >  2:4417696/1‑93 (MQ=255)
                                                                                  cGAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTaa       >  2:1686200/1‑93 (MQ=255)
                                                                                   gAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAAc      >  2:673516/1‑93 (MQ=255)
                                                                                   gAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAAc      >  2:3883415/1‑93 (MQ=255)
                                                                                   gAATAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAAc      <  2:2275491/93‑1 (MQ=255)
                                                                                    aaTAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACa     >  1:264754/1‑93 (MQ=255)
                                                                                    aaTAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACa     <  2:4555554/93‑1 (MQ=255)
                                                                                     aTAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACAt    <  1:4343145/93‑1 (MQ=255)
                                                                                      tAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACATg   <  1:4542021/93‑1 (MQ=255)
                                                                                      tAACATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACATg   >  2:897724/1‑93 (MQ=255)
                                                                                       aaCATCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACATgg  >  2:1311449/1‑93 (MQ=255)
                                                                                          |                                                                                         
TAATCTGGTGGAAGATTTCGACGCCACCGACCGCGGTGAAGGCGGCTTTGGTCACTCTGGTCGTCAGTAACACATACGCATCCGAATAACGTCATAACATAGCCGCAAACATTTCGTTTGCGGTCATAGCGTGGGTGCCGCCTGGCAAGTGCTTATTTTCAGGGGTATTTTGTAACATGG  >  NC_000913/3811945‑3812124

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: