BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,812,423	T→C	R101R (CGT→CGC)	b3641 →	putative transcriptional regulator

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,812,423	0	T	C	100.0%	731.6 / NA	230	R101R (CGT→CGC)	b3641	putative transcriptional regulator
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (109/121); total (109/121)

Only 100 of 239 total aligned reads displayed.

TACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCG  >  NC_000913/3812333‑3812512

tACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCaa                                                                                         >  1:3627647/1‑93 (MQ=255)

tACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCaa                                                                                         <  2:151936/93‑1 (MQ=255)

 aCTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAAt                                                                                        >  2:3472689/1‑93 (MQ=255)

 aCTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGCTTTGGTGAGCGCAAt                                                                                        >  2:3682294/1‑93 (MQ=255)

  cTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATc                                                                                       <  2:1176686/93‑1 (MQ=255)

   tCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATcc                                                                                      <  1:3843805/93‑1 (MQ=255)

      cATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTgg                                                                                   <  2:2667300/93‑1 (MQ=255)

       aTCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGc                                                                                  >  2:3549025/1‑93 (MQ=255)

         cAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCt                                                                                <  1:2585468/93‑1 (MQ=255)

           aCCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGa                                                                              >  1:4049705/1‑93 (MQ=255)

           aCCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGa                                                                              >  1:2276939/1‑93 (MQ=255)

            ccTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATGCTGGCCTGAc                                                                             >  1:3417615/1‑93 (MQ=255)

             cTGATTCTGAAACATGAGAAAGCCACCCCAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTTGCCCGAcc                                                                            >  2:2293296/1‑93 (MQ=255)

              tGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGAccc                                                                           >  1:4577571/1‑93 (MQ=255)

              tGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGAccc                                                                           <  2:3645006/93‑1 (MQ=255)

              tGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGAccc                                                                           <  1:999346/93‑1 (MQ=255)

                 ttCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCa                                                                        >  2:180272/1‑93 (MQ=255)

                   cTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATc                                                                      <  1:2527699/93‑1 (MQ=255)

                    tGAAAGAGGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATcc                                                                     <  1:1032425/93‑1 (MQ=255)

                     gAAAGATGAGAAGGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCt                                                                    >  1:3200530/1‑93 (MQ=255)

                     gAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCt                                                                    <  2:1030008/93‑1 (MQ=255)

                     gAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCt                                                                    >  2:1316651/1‑93 (MQ=255)

                      aaaGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTc                                                                   <  2:4628979/93‑1 (MQ=255)

                       aaGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTcc                                                                  >  1:2311983/1‑92 (MQ=255)

                       aaGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCa                                                                  >  1:4097330/1‑93 (MQ=255)

                       aaGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCa                                                                  <  1:399269/93‑1 (MQ=255)

                        aGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCAc                                                                 <  1:2988059/93‑1 (MQ=255)

                        aGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCAc                                                                 <  1:117244/93‑1 (MQ=255)

                        aGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGGTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCAc                                                                 >  2:1634447/1‑93 (MQ=255)

                         gATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACt                                                                <  2:1249606/93‑1 (MQ=255)

                         gATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACt                                                                <  2:4390794/93‑1 (MQ=255)

                         gATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACt                                                                >  1:1430243/1‑93 (MQ=255)

                          aTGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTg                                                               <  1:1762910/93‑1 (MQ=255)

                          aTGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTg                                                               <  1:1740514/93‑1 (MQ=255)

                           tGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTgg                                                              >  1:3017161/1‑93 (MQ=255)

                           ggagaAAGACGCCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTGGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTgg                                                              <  2:1952255/92‑1 (MQ=255)

                             agaAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTc                                                            <  1:1978467/93‑1 (MQ=255)

                              gaAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCa                                                           <  2:321210/93‑1 (MQ=255)

                               aaaGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCAt                                                          <  2:2712234/93‑1 (MQ=255)

                               aaaGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCAt                                                          <  1:2660433/93‑1 (MQ=255)

                                aaGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATg                                                         <  2:1346260/93‑1 (MQ=255)

                                 aGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATgc                                                        >  2:4590134/1‑93 (MQ=255)

                                 aGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATgc                                                        <  1:2649350/93‑1 (MQ=255)

                                  gACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATgcg                                                       <  2:4048495/93‑1 (MQ=255)

                                      ccacAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTaa                                                   >  1:1536379/1‑93 (MQ=255)

                                      ccacAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTaa                                                   >  2:1466538/1‑93 (MQ=255)

                                      ccacAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTaa                                                   >  2:4128147/1‑93 (MQ=255)

                                       cacaGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAAt                                                  >  2:935217/1‑93 (MQ=255)

                                       cacaGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAAt                                                  >  1:573428/1‑93 (MQ=255)

                                        acaGCGCGCCTGCGTCTGATTGTGCTGCTGCTTCTCTGTTTTGCTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATg                                                 <  2:3324191/93‑1 (MQ=255)

                                          aGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGtt                                               >  2:1662608/1‑93 (MQ=255)

                                           gcgcgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGttt                                              >  1:867180/1‑93 (MQ=255)

                                            cgcgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTg                                             >  1:4639496/1‑93 (MQ=255)

                                             gcgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGa                                            >  1:1226085/1‑93 (MQ=255)

                                             gcgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTAGa                                            <  1:3319452/93‑1 (MQ=255)

                                              cgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGaa                                           <  2:2361738/93‑1 (MQ=255)

                                              cgcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGaa                                           >  2:3926921/1‑93 (MQ=255)

                                               gcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAAc                                          <  1:3460190/93‑1 (MQ=255)

                                               gcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAAc                                          >  1:1919633/1‑93 (MQ=255)

                                               gcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAAc                                          <  1:1846226/93‑1 (MQ=255)

                                               gcCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAAc                                          <  1:3605355/93‑1 (MQ=255)

                                                ccTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACa                                         <  1:3136989/93‑1 (MQ=255)

                                                 cTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAg                                        <  1:4323445/93‑1 (MQ=255)

                                                  tGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAgg                                       >  1:2078259/1‑93 (MQ=255)

                                                  tGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAgg                                       >  1:4240398/1‑93 (MQ=255)

                                                    cGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGAt                                     <  1:711585/93‑1 (MQ=255)

                                                    cGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGAt                                     <  2:1540830/93‑1 (MQ=255)

                                                    cGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGAt                                     <  1:2944853/93‑1 (MQ=255)

                                                      tCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTTATGTTTGAACAGGATCg                                   >  1:4204139/1‑93 (MQ=255)

                                                      tCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCg                                   >  2:2219998/1‑93 (MQ=255)

                                                      tCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCg                                   >  1:377282/1‑93 (MQ=255)

                                                        tGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGcc                                 <  2:3024917/93‑1 (MQ=255)

                                                         taTTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCt                                <  2:3170125/92‑1 (MQ=255)

                                                            tgtgTTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCa                             >  1:2437192/1‑93 (MQ=255)

                                                             gtgtTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCaa                            >  2:67940/1‑93 (MQ=255)

                                                               tttGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAgg                          <  2:2871563/92‑1 (MQ=255)

                                                               gtTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAgg                          <  2:1318347/93‑1 (MQ=255)

                                                               gtTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAgg                          <  1:1631988/93‑1 (MQ=255)

                                                               gtTGCTGCTTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAgg                          <  2:2006346/93‑1 (MQ=255)

                                                                    tgctTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCa                     <  2:4252728/93‑1 (MQ=255)

                                                                     gctTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCAt                    >  1:2569454/1‑93 (MQ=255)

                                                                     gctTCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGCGCGCac                    >  2:4480870/1‑92 (MQ=255)

                                                                       ttCTCGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCa                  >  1:2426357/1‑93 (MQ=255)

                                                                        tctcGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCaa                 <  2:3914289/93‑1 (MQ=255)

                                                                        tctcGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCaa                 <  1:2171414/93‑1 (MQ=255)

                                                                         ttcGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCACTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAAc                <  2:3752677/92‑1 (MQ=255)

                                                                         ctcGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAAc                <  1:1067804/93‑1 (MQ=255)

                                                                         ctcGGTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAAc                <  2:534918/93‑1 (MQ=255)

                                                                             gTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGc            <  2:2588104/93‑1 (MQ=255)

                                                                             gTTTTGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGc            >  2:1087450/1‑93 (MQ=255)

                                                                               tttGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTg          <  1:375907/93‑1 (MQ=255)

                                                                                ttGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGt         <  1:670891/93‑1 (MQ=255)

                                                                                ttGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGt         >  1:3682721/1‑93 (MQ=255)

                                                                                ttGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGt         <  1:2403060/93‑1 (MQ=255)

                                                                                 tGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGtt        >  2:2049868/1‑93 (MQ=255)

                                                                                 tGGTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGtt        <  1:841957/93‑1 (MQ=255)

                                                                                   gTGAGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCg      >  1:3835092/1‑93 (MQ=255)

                                                                                      aGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGc   <  1:212958/93‑1 (MQ=255)

                                                                                      aGCGCAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGc   >  1:1686790/1‑93 (MQ=255)

                                                                                       gcgcAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCg  <  2:2442217/93‑1 (MQ=255)

TACTCGCATCAACCTGATTCTGAAAGATGAGAAAGACACCACAGCGCGCCTGCGTCTGATTGTGTTGCTGCTTCTCGGTTTTGGTGAGCGTAATCCTGGCCTGACCCGCATCCTCACTGGTCATGCGCTAATGTTTGAACAGGATCGCCTGCAAGGGCGCATCAACCAGCTGTTCGAGCG  >  NC_000913/3812333‑3812512

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`