| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 392,762 | T→C | L175P (CTG→CCG) | yaiU → | putative flagellin structural protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 392,762 | 0 | T | C | 96.0% | 496.8 / 8.0 | 173 | L175P (CTG→CCG) | yaiU | putative flagellin structural protein |
| Reads supporting (aligned to +/- strand): ref base T (6/1); new base C (88/78); total (94/79) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.32e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
ACCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTG > NC_000913/392672‑392851 | aCCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGa > 1:3586182/1‑93 (MQ=255)aCCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGa < 1:2190501/93‑1 (MQ=255) cTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGc > 2:3026853/1‑93 (MQ=255) cTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGc < 2:2173780/93‑1 (MQ=255) tGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCa < 1:3601201/93‑1 (MQ=255) tGGGAGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAgga > 2:2553961/1‑91 (MQ=255) ggTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATc < 2:1616432/93‑1 (MQ=255) ggTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATc > 1:3353660/1‑93 (MQ=255) ggTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATc < 2:486843/93‑1 (MQ=255) gTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATcc < 2:3292165/93‑1 (MQ=255) gTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATcc < 1:3154855/93‑1 (MQ=255) tGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATccc < 1:3328326/93‑1 (MQ=255) tGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATccc > 2:624635/1‑93 (MQ=255) tGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATccc > 1:3012450/1‑93 (MQ=255) gCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCg > 1:195118/1‑93 (MQ=255) gCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCg > 1:1146933/1‑93 (MQ=255) aTACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTc > 1:370431/1‑93 (MQ=255) tACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCt < 2:743560/93‑1 (MQ=255) tACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCt > 2:3770069/1‑93 (MQ=255) tACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCt > 1:2937086/1‑93 (MQ=255) tACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAAAAGATGGAGCTGACCGACTACGCTAACATGGCGTCGCGCATCCCGTCt > 2:3218184/1‑93 (MQ=255) acacCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTg < 1:1181589/93‑1 (MQ=255) cacCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGc < 2:148531/93‑1 (MQ=255) cacCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGc < 2:3120466/93‑1 (MQ=255) acCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCg > 1:3921822/1‑93 (MQ=255) cTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGaa > 2:453838/1‑93 (MQ=255) cTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGac > 1:3625863/1‑92 (MQ=255) cTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGaa < 2:1129994/93‑1 (MQ=255) cTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGaa < 2:66011/93‑1 (MQ=255) cAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACAcc > 2:158528/1‑93 (MQ=255) ggCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCaa > 1:1999840/1‑93 (MQ=255) gCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAat > 1:4541657/1‑93 (MQ=255) cTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAata > 1:1111325/1‑93 (MQ=255) cTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAata < 2:2235506/93‑1 (MQ=255) tGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTCCGAACACCAatat > 1:2676717/1‑93 (MQ=255) gAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATc < 1:3986132/93‑1 (MQ=255) gAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCAACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATc < 1:2497200/93‑1 (MQ=255) aaCAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATct < 1:1924019/93‑1 (MQ=255) cAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctgg > 2:1525431/1‑93 (MQ=255) aGCGCGGTAACACCGTTGTTCTGCAACAGATGGATCTGACCGGCTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctgga > 2:3892732/1‑93 (MQ=255) gcgcGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaa > 1:4225971/1‑93 (MQ=255) gcgcGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaa > 2:1101990/1‑93 (MQ=255) gcgGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacc < 2:1789996/93‑1 (MQ=255) gcgGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacc > 1:469217/1‑93 (MQ=255) cgGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacct < 1:4316696/93‑1 (MQ=255) cgGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacct > 1:3183080/1‑93 (MQ=255) ggcaaCACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctg < 1:2297608/90‑1 (MQ=255) gTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctgg > 1:2550856/1‑93 (MQ=255) aaCGCCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctggaa < 2:2765317/93‑1 (MQ=255) aaCACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctggaa < 1:3452797/93‑1 (MQ=255) aaCACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctggaa < 1:2712697/93‑1 (MQ=255) acacCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctggaac > 1:2053118/1‑93 (MQ=255) acacCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATctggaacctggaac < 1:1444465/93‑1 (MQ=255) cacCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACa < 1:78242/93‑1 (MQ=255) cacCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACa > 1:535677/1‑93 (MQ=255) acCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACaa > 2:2772528/1‑93 (MQ=255) acCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACaa < 2:3114433/93‑1 (MQ=255) acCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACaa < 2:4022504/93‑1 (MQ=255) ccGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAg > 1:1433675/1‑93 (MQ=255) cGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGa > 2:131595/1‑93 (MQ=255) cGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGa > 2:1424005/1‑93 (MQ=255) gttgttCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGac > 1:2473441/1‑93 (MQ=255) gttgttCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGac > 2:4373909/1‑93 (MQ=255) gttgttCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGac < 1:3112802/93‑1 (MQ=255) gttgtgCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGac < 2:2878580/93‑1 (MQ=255) tgttCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGacac < 2:2030959/93‑1 (MQ=255) tCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGt < 1:2772613/93‑1 (MQ=255) tCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTCGAACCTGGAACAAGACAACGt > 2:3245709/1‑93 (MQ=255) cTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGtt > 2:968996/1‑93 (MQ=255) tGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTg > 2:3490407/1‑93 (MQ=255) cAACAGATTGAGCTGACCGTCTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGt > 2:4581431/1‑93 (MQ=255) aaCAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGACTGCGAACACCAATATCTGGAACCTGGAACAAGACACGGTTGGTa > 2:1463749/1‑93 (MQ=255) aCAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTAc > 2:2112997/1‑93 (MQ=255) aCAGATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTAc < 2:1463922/93‑1 (MQ=255) gATGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCg > 1:4327882/1‑93 (MQ=255) tGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTc < 2:4683043/93‑1 (MQ=255) tGGAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTc > 1:3793979/1‑93 (MQ=255) ggAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCt > 1:4193268/1‑93 (MQ=255) ggAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCt < 2:4191515/93‑1 (MQ=255) ggAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCt < 2:4145305/93‑1 (MQ=255) gAGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTg < 2:2903315/93‑1 (MQ=255) aGCTGACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGa < 2:4237987/93‑1 (MQ=255) tGACCGACTACGCTAACATGGCGCCGAGCATCACGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACAGTTGGTACTCGTCTGACCa > 2:2273237/1‑93 (MQ=255) gACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCaa > 1:4056489/1‑93 (MQ=255) gACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCaa > 2:4628705/1‑93 (MQ=255) gACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCaa > 2:3684306/1‑93 (MQ=255) gACCGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCaa > 1:448662/1‑93 (MQ=255) ccGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAAct > 2:2566187/1‑93 (MQ=255) cGACTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAActc < 2:860988/93‑1 (MQ=255) gACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAActct > 2:1098789/1‑93 (MQ=255) caCTACGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAActct < 1:1025478/92‑1 (MQ=255) aCGCTAACATGGCGCCGAGCATCCCGTCTGCGCACACCAATATCTGGAAGCTGGACCAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTc > 1:2868826/1‑93 (MQ=255) aCGCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTc > 1:1255156/1‑93 (MQ=255) gCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCAt < 2:1809104/93‑1 (MQ=255) gCTAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCAt > 2:2389408/1‑93 (MQ=255) tAACATGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATgg < 2:3283788/93‑1 (MQ=255) aTGGCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTg > 1:308145/1‑93 (MQ=255) ggCGCCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGc > 2:3131268/1‑93 (MQ=255) gcgcCGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCt < 2:2526423/93‑1 (MQ=255) cgcTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTg > 1:734900/1‑93 (MQ=255) | ACCTGGGTGCATACACCTATCAGGCTGAACAGCGCGGTAACACCGTTGTTCTGCAACAGATGGAGCTGACCGACTACGCTAACATGGCGCTGAGCATCCCGTCTGCGAACACCAATATCTGGAACCTGGAACAAGACACCGTTGGTACTCGTCTGACCAACTCTCGTCATGGCCTGGCTG > NC_000913/392672‑392851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |