BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,828,674	T→C	T197T (ACT→ACC)	yicH →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,828,674	0	T	C	100.0%	879.2 / NA	273	T197T (ACT→ACC)	yicH	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (183/90); total (183/90)

Only 100 of 280 total aligned reads displayed.

GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT  >  NC_000913/3828584‑3828763

gTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCaa                                                                                         >  1:66479/1‑93 (MQ=255)

gTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCaa                                                                                         <  2:1681359/93‑1 (MQ=255)

 tttAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAc                                                                                        >  2:4198605/1‑93 (MQ=255)

 tttAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAc                                                                                        >  2:3299403/1‑93 (MQ=255)

  ttAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAcc                                                                                       >  1:2933853/1‑93 (MQ=255)

  ttAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAAcc                                                                                       <  2:189508/93‑1 (MQ=255)

     gTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTgg                                                                                    >  1:3056438/1‑93 (MQ=255)

     gTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTgg                                                                                    >  2:2733578/1‑93 (MQ=255)

         cGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGc                                                                                >  1:1867349/1‑93 (MQ=255)

         cGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGGGc                                                                                >  1:2652171/1‑93 (MQ=255)

           gATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGGCg                                                                              >  2:2284485/1‑93 (MQ=255)

            aTCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGa                                                                             >  2:210871/1‑93 (MQ=255)

            aTCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGa                                                                             >  1:1964949/1‑93 (MQ=255)

             tCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAc                                                                            >  1:425077/1‑93 (MQ=255)

             tCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAc                                                                            >  2:4425654/1‑93 (MQ=255)

             tCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGAc                                                                            >  2:968259/1‑93 (MQ=255)

              cGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACa                                                                           <  1:825556/93‑1 (MQ=255)

               gCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGCCCAACCTGGGTGCCGACAt                                                                          >  2:1427324/1‑93 (MQ=255)

               gCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACAt                                                                          >  2:4525680/1‑93 (MQ=255)

                cTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATc                                                                         >  1:2990909/1‑93 (MQ=255)

                  ttCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGc                                                                       >  1:2871570/1‑93 (MQ=255)

                   tCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGcc                                                                      <  2:4263328/93‑1 (MQ=255)

                       tCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCcgcg                                                                  >  2:3598101/1‑93 (MQ=255)

                         aaTGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCggg                                                                >  2:3398513/1‑93 (MQ=255)

                           tgatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAc                                                              >  1:472474/1‑93 (MQ=255)

                           tgatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGAc                                                              <  1:3873081/93‑1 (MQ=255)

                            gatgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACa                                                             >  1:524540/1‑93 (MQ=255)

                              tgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAtt                                                           >  1:581698/1‑93 (MQ=255)

                              tgTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACAtt                                                           >  1:2300915/1‑93 (MQ=255)

                               gTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTa                                                          >  1:159059/1‑93 (MQ=255)

                               gTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTa                                                          >  1:3586537/1‑93 (MQ=255)

                                 tCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAAc                                                        >  2:2020792/1‑93 (MQ=255)

                                   cTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCg                                                      >  1:1005675/1‑93 (MQ=255)

                                   cTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCg                                                      >  1:2340818/1‑93 (MQ=255)

                                    tGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCgg                                                     >  1:3308150/1‑93 (MQ=255)

                                     gCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGa                                                    <  1:2502729/93‑1 (MQ=255)

                                      ccaccaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGaa                                                   <  1:412236/93‑1 (MQ=255)

                                        accaATGTACTGATTGAAGGCTGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAc                                                 >  2:561636/1‑93 (MQ=255)

                                        accaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAc                                                 >  2:286629/1‑93 (MQ=255)

                                        accaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAc                                                 <  2:348415/93‑1 (MQ=255)

                                        accaATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAc                                                 >  1:4534265/1‑93 (MQ=255)

                                          caATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgc                                               <  1:1537220/93‑1 (MQ=255)

                                          caATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgc                                               <  2:532697/93‑1 (MQ=255)

                                          caATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgc                                               >  1:2027150/1‑93 (MQ=255)

                                           aaTGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAAcgcg                                              >  2:3117345/1‑93 (MQ=255)

                                             tGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCa                                            >  1:1684607/1‑93 (MQ=255)

                                              gTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAg                                           <  2:794403/93‑1 (MQ=255)

                                              gTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAg                                           >  1:4384312/1‑93 (MQ=255)

                                               tACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGc                                          >  1:339843/1‑93 (MQ=255)

                                               tACTGATTGAAGGCAGTATGGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGc                                          <  1:1060865/93‑1 (MQ=255)

                                                  tGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGCCATTAACCGGAAACGCGCAGCGTa                                       >  1:855957/1‑93 (MQ=255)

                                                  tGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTa                                       >  1:3024891/1‑93 (MQ=255)

                                                   gATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTaa                                      >  2:3066914/1‑93 (MQ=255)

                                                    aTTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAAc                                     >  1:1412337/1‑93 (MQ=255)

                                                    aTTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAAc                                     >  2:1461058/1‑93 (MQ=255)

                                                     ttGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACg                                    >  2:3230280/1‑93 (MQ=255)

                                                     ttGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACg                                    >  2:2404361/1‑93 (MQ=255)

                                                     ttGAAGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGGGCCGACATCGCCCGCGGGACATTAACCGCTACCGCGCAGCGTAACg                                    >  2:235632/1‑93 (MQ=255)

                                                        aaGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCg                                 >  1:2323755/1‑93 (MQ=255)

                                                         aGGCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGa                                <  2:4653166/93‑1 (MQ=255)

                                                          ggCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAc                               >  1:993003/1‑93 (MQ=255)

                                                          ggCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGAc                               >  2:384639/1‑93 (MQ=255)

                                                           gCAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACg                              >  2:1086044/1‑93 (MQ=255)

                                                            cAGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACgg                             <  1:3383264/93‑1 (MQ=255)

                                                             aGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGc                            >  1:237629/1‑93 (MQ=255)

                                                             aGTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGc                            <  2:4189702/93‑1 (MQ=255)

                                                              gTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCa                           >  2:1354872/1‑93 (MQ=255)

                                                              gTATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCa                           >  2:3553796/1‑93 (MQ=255)

                                                               tATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAg                          >  1:2550221/1‑93 (MQ=255)

                                                               tATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAg                          >  2:2068410/1‑93 (MQ=255)

                                                               tATTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAg                          <  1:189859/93‑1 (MQ=255)

                                                                aTTGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGc                         <  1:3782241/93‑1 (MQ=255)

                                                                 ttGATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCt                        <  2:4515136/93‑1 (MQ=255)

                                                                   gATAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTgg                      >  2:3186303/1‑93 (MQ=255)

                                                                    aTAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTgga                     >  1:3653003/1‑92 (MQ=255)

                                                                    aTAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGc                     >  1:765671/1‑93 (MQ=255)

                                                                    aTAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGc                     >  2:448167/1‑93 (MQ=255)

                                                                     tAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCa                    <  1:4321887/93‑1 (MQ=255)

                                                                     tAACGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCa                    <  1:1128750/93‑1 (MQ=255)

                                                                      aaCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCaa                   <  2:2802039/93‑1 (MQ=255)

                                                                      aaCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCaa                   >  1:2640952/1‑93 (MQ=255)

                                                                      aaCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCaa                   >  2:1938631/1‑93 (MQ=255)

                                                                       aCGATCTCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAg                  <  1:1255125/93‑1 (MQ=255)

                                                                       aCGATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGAAACGCCGACGGCACCTGGCAAg                  >  1:3282958/1‑93 (MQ=255)

                                                                         gATCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTg                >  2:1237959/1‑93 (MQ=255)

                                                                          aTCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTgg               >  2:4052792/1‑93 (MQ=255)

                                                                          aTCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTgg               >  1:4153388/1‑93 (MQ=255)

                                                                          aTCGCGTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTgg               <  2:176658/93‑1 (MQ=255)

                                                                            cgcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaa             >  2:480420/1‑93 (MQ=255)

                                                                             gcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaaa            >  2:2661612/1‑93 (MQ=255)

                                                                             gcgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaaa            >  1:1632908/1‑93 (MQ=255)

                                                                              cgTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGaaaa           <  2:58130/93‑1 (MQ=255)

                                                                               gTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAc          <  1:2247189/93‑1 (MQ=255)

                                                                               gTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAc          <  1:3097776/93‑1 (MQ=255)

                                                                               gTTACGCTGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAAc          >  2:3638309/1‑93 (MQ=255)

                                                                                ttACGCTGACCAACCTGGGTGCCGACACCGCCCGCCGGGCATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTCGCAAGTGGAAAAcc         >  2:3775523/1‑93 (MQ=255)

                                                                                      tGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa   <  2:700794/93‑1 (MQ=255)

                                                                                      tGACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCa   >  1:3658269/1‑93 (MQ=255)

                                                                                       gACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTgcg     >  1:3472776/1‑90 (MQ=255)

                                                                                       gACCAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAt  <  1:4607882/93‑1 (MQ=255)

GTTTAGTGCCGGATCGCTTTCGCTCAATGATGTTCCTGCCACCAATGTACTGATTGAAGGCAGTATTGATAACGATCGCGTTACGCTGACTAACCTGGGTGCCGACATCGCCCGCGGGACATTAACCGGAAACGCGCAGCGTAACGCCGACGGCAGCTGGCAAGTGGAAAACCTGCGCAT  >  NC_000913/3828584‑3828763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`