BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,837,057	G→A	L188L (CTC→CTT)	nlpA ←	lipoprotein‑28

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,837,057	0	G	A	100.0%	860.4 / NA	238	L188L (CTC→CTT)	nlpA	lipoprotein‑28
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (132/106); total (132/106)

Only 100 of 244 total aligned reads displayed.

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

gCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAg                                                                                         >  2:3976662/1‑93 (MQ=255)

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGc                                                                                        <  2:3555654/93‑1 (MQ=255)

  tGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCt                                                                                       >  2:3424888/1‑93 (MQ=255)

   gTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTg                                                                                      >  2:4322170/1‑93 (MQ=255)

      gTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgcgc                                                                                   <  2:3117616/93‑1 (MQ=255)

          aCCGGAGAAAGCCCGGTCTGCTGAATGCAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGccccc                                                                               >  1:504821/1‑93 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              >  2:2448296/1‑93 (MQ=255)

              gagaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGa                                                                           >  1:1056238/1‑93 (MQ=255)

              gagaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGa                                                                           <  2:2189758/93‑1 (MQ=255)

               agaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAg                                                                          <  1:1988823/93‑1 (MQ=255)

                gaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGt                                                                         >  1:3866887/1‑93 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGtt                                                                        >  1:683101/1‑93 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGtt                                                                        <  1:715401/93‑1 (MQ=255)

                   aGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTcc                                                                      <  1:2282110/93‑1 (MQ=255)

                    gCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCa                                                                     >  2:1758104/1‑93 (MQ=255)

                    gCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCa                                                                     <  2:469857/93‑1 (MQ=255)

                      ccGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATa                                                                   >  2:3009450/1‑93 (MQ=255)

                       cGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATaa                                                                  >  1:4173691/1‑93 (MQ=255)

                       cGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATaa                                                                  <  1:4234172/93‑1 (MQ=255)

                       cGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATaa                                                                  <  2:4641101/93‑1 (MQ=255)

                        ggTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAAt                                                                 >  2:1443636/1‑93 (MQ=255)

                         gTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATc                                                                <  1:4346820/93‑1 (MQ=255)

                          tCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCt                                                               >  1:2693220/1‑93 (MQ=255)

                            tgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGc                                                             >  2:4160715/1‑93 (MQ=255)

                             gctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGATGCGCCCCCTCGAGTTCCATAATCTGCa                                                            >  2:1797111/1‑93 (MQ=255)

                              ctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaa                                                           <  2:4211233/93‑1 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          >  1:3427586/1‑93 (MQ=255)

                                gAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAAt                                                         <  2:2620212/93‑1 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       >  1:139409/1‑93 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       >  1:4052193/1‑93 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      >  1:4588003/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    <  2:1129562/93‑1 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  2:2855656/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  1:3361552/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  2:1271227/1‑93 (MQ=255)

                                      aaGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAg                                                   >  2:967081/1‑93 (MQ=255)

                                      aaGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAg                                                   <  1:2375414/93‑1 (MQ=255)

                                      aaGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAg                                                   >  1:1313355/1‑93 (MQ=255)

                                        gtggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGa                                                 <  1:2518309/93‑1 (MQ=255)

                                         tggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAt                                                >  2:151985/1‑93 (MQ=255)

                                         tggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAt                                                >  2:3563832/1‑93 (MQ=255)

                                           gtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTa                                              <  1:1941889/93‑1 (MQ=255)

                                               tGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCgg                                          >  2:2064250/1‑93 (MQ=255)

                                               tGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCgg                                          >  2:1045996/1‑93 (MQ=255)

                                                gATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGt                                         >  2:3291444/1‑93 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        <  2:2528227/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  2:2987174/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       >  2:3871564/1‑93 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      >  1:41913/1‑93 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      <  1:2488391/93‑1 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      >  2:2597277/1‑93 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      <  2:735868/93‑1 (MQ=255)

                                                   aaTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtat                                      >  1:3648318/1‑93 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     <  2:2574952/93‑1 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     >  1:3625473/1‑93 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     <  1:2336014/93‑1 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     <  1:2735935/93‑1 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    <  1:2143629/93‑1 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    <  2:1570895/93‑1 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAAGGACGAGGATTATCGGTTatat                                    <  2:1938417/93‑1 (MQ=255)

                                                      cGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATc                                   <  2:1611815/93‑1 (MQ=255)

                                                       ccTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATcc                                  <  2:3150499/92‑1 (MQ=255)

                                                          aCATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgc                               >  1:4482199/1‑93 (MQ=255)

                                                           cATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgcg                              <  1:1341051/93‑1 (MQ=255)

                                                           cATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATACAgcg                              >  1:1650466/1‑93 (MQ=255)

                                                             tCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGcgcg                            >  1:3519754/1‑93 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggt                          <  2:4486084/93‑1 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCgga                          >  1:661163/1‑92 (MQ=255)

                                                                aCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggta                         >  2:4245096/1‑93 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        >  2:5351/1‑93 (MQ=255)

                                                                  tttGGGATCATCCAGTATGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       <  2:2667005/93‑1 (MQ=255)

                                                                  tttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       >  2:1018242/1‑93 (MQ=255)

                                                                  tttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       <  1:3288449/93‑1 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggt                      >  2:3229078/1‑93 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggt                      <  1:1022101/93‑1 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     <  1:2529446/93‑1 (MQ=255)

                                                                      ggATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaat                   <  1:3916782/93‑1 (MQ=255)

                                                                       gATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaata                  <  2:2738506/93‑1 (MQ=255)

                                                                       gATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaata                  <  1:3792758/93‑1 (MQ=255)

                                                                       gATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaata                  >  1:1255471/1‑93 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                <  2:2390062/93‑1 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                >  2:3719283/1‑93 (MQ=255)

                                                                          catcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAcc               >  1:202258/1‑93 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              >  1:900808/1‑93 (MQ=255)

                                                                            tcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCt             <  1:80680/93‑1 (MQ=255)

                                                                               aGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          >  1:939889/1‑93 (MQ=255)

                                                                               aGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          <  2:4286678/93‑1 (MQ=255)

                                                                                gTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTc         >  1:3217319/1‑93 (MQ=255)

                                                                                gTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATA‑CCAGCGCGGGAGGTAATAACCCTTTTcc        >  2:3927338/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  1:4518374/1‑93 (MQ=255)

                                                                                  aCGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTccc       >  1:314448/1‑93 (MQ=255)

                                                                                    gcgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctc     >  1:513713/1‑93 (MQ=255)

                                                                                     cgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctct    <  1:4534063/93‑1 (MQ=255)

                                                                                     cgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctct    <  2:1717285/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  1:143462/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   >  1:3686379/1‑93 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  1:3608265/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  1:4430900/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  1:1774889/93‑1 (MQ=255)

                                                                                      gcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCtt   <  2:210246/93‑1 (MQ=255)

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`