BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,841,014	A→G	Y161H (TAC→CAC)	yicO ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,841,014	0	A	G	100.0%	758.9 / NA	238	Y161H (TAC→CAC)	yicO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (130/108); total (130/108)

Only 100 of 242 total aligned reads displayed.

TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC  >  NC_000913/3840924‑3841102

tATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGcc                                                                                        <  2:1907387/93‑1 (MQ=255)

tATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGATGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGcc                                                                                        >  1:2157088/1‑93 (MQ=255)

 aTTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCg                                                                                       >  1:3438288/1‑93 (MQ=255)

   tttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGa                                                                                     <  2:4380401/93‑1 (MQ=255)

    ttttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGAt                                                                                    <  1:3997053/93‑1 (MQ=255)

     tttAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATa                                                                                   <  1:1338633/93‑1 (MQ=255)

         aTCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaa                                                                               <  1:4424718/93‑1 (MQ=255)

         aTCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaa                                                                               >  1:2905772/1‑93 (MQ=255)

          tCCCATTAAGGCGATAAATAATCCAATTCCGCCGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGaaa                                                                              >  2:2579346/1‑93 (MQ=255)

           cccATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAAc                                                                             >  1:730041/1‑93 (MQ=255)

             cATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAagag                                                                           >  1:2995536/1‑93 (MQ=255)

               ttAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCg                                                                         >  1:513577/1‑93 (MQ=255)

                tAAGGCGATAAATAATCCAATTCCGCTGTTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt                                                                        <  2:3795393/93‑1 (MQ=255)

                tAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGt                                                                        <  2:3568091/93‑1 (MQ=255)

                 aaGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTg                                                                       <  2:4121527/93‑1 (MQ=255)

                 aaGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTg                                                                       <  1:3562012/93‑1 (MQ=255)

                  aGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGa                                                                      >  1:4219680/1‑93 (MQ=255)

                  aGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGa                                                                      <  1:2866644/93‑1 (MQ=255)

                   ggCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAg                                                                     >  2:3839429/1‑93 (MQ=255)

                      gATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaa                                                                  <  1:3648372/93‑1 (MQ=255)

                        taaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaa                                                                >  1:2689465/1‑93 (MQ=255)

                        taaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaa                                                                >  1:137240/1‑93 (MQ=255)

                         aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa                                                               <  1:2469133/93‑1 (MQ=255)

                         aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa                                                               <  1:1674911/93‑1 (MQ=255)

                         aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa                                                               >  2:4652878/1‑93 (MQ=255)

                         aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa                                                               <  2:1493797/93‑1 (MQ=255)

                         aaataaTCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCaaaaa                                                               >  2:2772801/1‑93 (MQ=255)

                          aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt                                                              >  1:2333856/1‑93 (MQ=255)

                          aataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAAt                                                              <  1:1282292/93‑1 (MQ=255)

                           ataatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATa                                                             >  1:4458760/1‑93 (MQ=255)

                            taatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAg                                                            <  1:4178218/93‑1 (MQ=255)

                             aatCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAgc                                                           >  1:3581931/1‑92 (MQ=255)

                              atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc                                                          <  2:2454568/93‑1 (MQ=255)

                              atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc                                                          >  2:4230730/1‑93 (MQ=255)

                              atCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTc                                                          <  1:2670221/93‑1 (MQ=255)

                               tCCAATTCCGCTGGTGATACTAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTca                                                         >  1:4103688/1‑92 (MQ=255)

                               tCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTcc                                                         >  1:3234467/1‑93 (MQ=255)

                               tCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTcc                                                         >  1:712943/1‑93 (MQ=255)

                                ccAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGCTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAACTAGTCCa                                                        >  2:3127434/1‑93 (MQ=255)

                                 cAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCaa                                                       >  1:909355/1‑93 (MQ=255)

                                  aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc                                                      <  2:3088944/93‑1 (MQ=255)

                                  aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc                                                      <  2:707735/93‑1 (MQ=255)

                                  aaTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAAc                                                      >  1:1570744/1‑93 (MQ=255)

                                   aTTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACt                                                     >  2:267557/1‑93 (MQ=255)

                                    ttCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTg                                                    >  2:1643653/1‑93 (MQ=255)

                                     tCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTgc                                                   >  2:4667119/1‑93 (MQ=255)

                                     tCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTgc                                                   <  1:1761718/93‑1 (MQ=255)

                                         cTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGccc                                               >  2:1026321/1‑93 (MQ=255)

                                            gTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAg                                            >  2:2519902/1‑93 (MQ=255)

                                               aTACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAat                                         >  1:2808604/1‑93 (MQ=255)

                                               aTACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAat                                         <  1:757310/93‑1 (MQ=255)

                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                        >  2:367991/1‑93 (MQ=255)

                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                        <  1:616406/93‑1 (MQ=255)

                                                tACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAata                                        >  2:139380/1‑93 (MQ=255)

                                                 aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat                                       <  2:2622765/93‑1 (MQ=255)

                                                 aCCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAatat                                       <  2:1204191/93‑1 (MQ=255)

                                                  ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt                                      >  2:77018/1‑93 (MQ=255)

                                                  ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt                                      <  2:3209010/93‑1 (MQ=255)

                                                  ccAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATAtt                                      <  2:2083093/93‑1 (MQ=255)

                                                   cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg                                     >  1:3825420/1‑93 (MQ=255)

                                                   cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg                                     <  1:143522/93‑1 (MQ=255)

                                                   cAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTg                                     >  1:4266297/1‑93 (MQ=255)

                                                    aaTACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgc                                    >  1:4659289/1‑93 (MQ=255)

                                                     aTACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcg                                   >  1:2293742/1‑93 (MQ=255)

                                                      tACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTgcgc                                  >  1:2097177/1‑93 (MQ=255)

                                                         gTAAACTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCa                               >  1:1107428/1‑93 (MQ=255)

                                                            aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc                            <  2:1552953/93‑1 (MQ=255)

                                                            aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc                            >  1:2223534/1‑93 (MQ=255)

                                                            aaCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATcc                            >  1:4107576/1‑93 (MQ=255)

                                                             aCTTAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATccc                           <  1:1328993/93‑1 (MQ=255)

                                                               ttAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCgg                         >  2:4180980/1‑93 (MQ=255)

                                                                tAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGt                        >  2:845981/1‑93 (MQ=255)

                                                                tAAGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGt                        >  2:2994603/1‑93 (MQ=255)

                                                                 taGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTc                       <  2:1513589/92‑1 (MQ=255)

                                                                 aaGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTc                       <  1:2944980/93‑1 (MQ=255)

                                                                  aGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCt                      >  2:1336164/1‑93 (MQ=255)

                                                                  aGGGAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGACt                      >  1:213122/1‑93 (MQ=255)

                                                                   gggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTg                     >  1:84829/1‑93 (MQ=255)

                                                                    ggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGc                    <  2:2849859/93‑1 (MQ=255)

                                                                    ggAATGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGc                    >  2:3268608/1‑93 (MQ=255)

                                                                       aTGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAg                 <  2:3626066/93‑1 (MQ=255)

                                                                        tGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAgg                >  1:1188091/1‑93 (MQ=255)

                                                                        tGTTGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAgg                >  1:3122454/1‑93 (MQ=255)

                                                                          ttGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgag              >  2:311255/1‑93 (MQ=255)

                                                                          ttGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgag              <  1:2446889/93‑1 (MQ=255)

                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga             <  1:104404/93‑1 (MQ=255)

                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga             <  1:1785017/93‑1 (MQ=255)

                                                                           tGGAGATCATCCAGTGCCGGATACGAAACAGCGGGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGgaga             <  2:1974167/93‑1 (MQ=255)

                                                                            ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAt            <  1:3107206/93‑1 (MQ=255)

                                                                            ggAGATCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGAt            >  2:4308211/1‑93 (MQ=255)

                                                                             gagaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATg           >  1:3401973/1‑93 (MQ=255)

                                                                             gagaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATg           >  1:3535481/1‑93 (MQ=255)

                                                                               gaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGcc         >  2:3540893/1‑93 (MQ=255)

                                                                               gaTCATCCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGcc         <  1:1876396/93‑1 (MQ=255)

                                                                                   atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc     <  2:1608660/93‑1 (MQ=255)

                                                                                   atcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATc     <  1:459623/93‑1 (MQ=255)

                                                                                    tcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCg    >  2:65022/1‑93 (MQ=255)

                                                                                    tcCAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCg    >  1:1113138/1‑93 (MQ=255)

                                                                                      cAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcc  >  1:3903613/1‑93 (MQ=255)

                                                                                      cAGTGCCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGcc  >  1:4483211/1‑93 (MQ=255)

TATTTTTTAATCCCATTAAGGCGATAAATAATCCAATTCCGCTGGTGATACCAATACGTAAACTTAAGGGAATGTTGGAGATCATCCAGTACCGGATACGAAACAGCGTGAGCAAAAATAGTCCAACTGCGCCCCAGAATATTGCGCCCATCCCGGTCTGCCAGGAGATGCCCATCGCC  >  NC_000913/3840924‑3841102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`