| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,847,265 | A→G | W167R (TGG→CGG) | b3668 ← | sensor histidine protein kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,847,265 | 0 | A | G | 99.5% | 659.8 / ‑4.9 | 214 | W167R (TGG→CGG) | b3668 | sensor histidine protein kinase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (82/131); total (83/131) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.79e-01 | |||||||||||
Only 100 of 239 total aligned reads displayed.
GACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG > NC_000913/3847175‑3847354 | aCTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgt < 1:676988/93‑1 (MQ=255) cTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCgggat > 1:4038020/1‑91 (MQ=255) cTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtg > 1:4227803/1‑93 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt > 2:3231272/1‑93 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt < 2:2510818/93‑1 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt < 1:2184968/93‑1 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt > 2:2147126/1‑93 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt > 1:1818402/1‑93 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGgtgt < 1:1762794/93‑1 (MQ=255) tGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGACAAACCAGTGACGGACCGAGCGGCAGCCGGgggt > 1:2807180/1‑93 (MQ=255) aTAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGTCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTa < 1:812149/93‑1 (MQ=255) aTAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTa < 2:3137593/93‑1 (MQ=255) aTAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTa < 1:1188555/93‑1 (MQ=255) tatcaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAt > 1:3780903/4‑93 (MQ=255) aacaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACTGAGCGGCAGCCGGGCGTTAtt > 1:4590602/1‑93 (MQ=255) aacaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAtt < 1:3741054/93‑1 (MQ=255) aacaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTAtt < 2:1311338/93‑1 (MQ=255) acaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTg < 2:3681452/93‑1 (MQ=255) acaaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTg < 1:2999533/93‑1 (MQ=255) caaacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTgg < 2:2755709/93‑1 (MQ=255) acgtgcagcaAGTGCCAGACCAGATGCCGCGCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCg < 1:3338549/89‑1 (MQ=255) aacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCg > 2:2373538/1‑93 (MQ=255) aacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCg > 1:1210556/1‑93 (MQ=255) aacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGACGGGTGTTATTGGCg > 1:10819/1‑93 (MQ=255) aacaGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGAAGCCGGGTGTTATTGTCg < 2:1460097/93‑1 (MQ=255) agcagcAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCgaga < 2:592637/93‑1 (MQ=255) gcagcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAt < 2:2745837/93‑1 (MQ=255) gcagcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGAt > 1:1655214/1‑93 (MQ=255) agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg < 1:3271568/93‑1 (MQ=255) agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg > 2:1050702/1‑93 (MQ=255) agcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAg < 2:3738825/93‑1 (MQ=255) gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAgg > 1:2146019/1‑92 (MQ=255) gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGt < 2:1825597/93‑1 (MQ=255) gcaAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGt < 2:1973719/93‑1 (MQ=255) caAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTg > 2:449388/1‑93 (MQ=255) aaGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGGGc > 1:3976505/1‑93 (MQ=255) aGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGcc > 2:1502875/1‑93 (MQ=255) gTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCa > 1:2538677/1‑93 (MQ=255) tACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAg > 1:3197394/1‑93 (MQ=255) accagaccagATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGa > 2:392979/1‑93 (MQ=255) cagaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAac < 1:870521/93‑1 (MQ=255) agaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAaca > 2:2234919/1‑93 (MQ=255) agaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAaca < 1:1854288/93‑1 (MQ=255) agaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAaca < 1:4384282/93‑1 (MQ=255) agaccagaTGTCGCCCGCGCCAGCTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGATGAAGTGCCCGAaca > 2:3582748/1‑93 (MQ=255) gaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGGCAGAacac > 1:849060/1‑93 (MQ=255) gaccagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAacac > 1:535794/1‑93 (MQ=255) accagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACAcc > 1:1951725/1‑93 (MQ=255) cagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAg < 1:2578930/93‑1 (MQ=255) cagaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGGGACGGACCGAGGGGCAGCCGGGTGTTATTTGAGAGATAGTTCCAGAACACCaa > 2:20648/1‑92 (MQ=255) cgacgTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGa < 1:14959/89‑1 (MQ=255) gaTGTCGCCCGCGCCAGTTGATTGGCTGGGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc < 2:3789755/93‑1 (MQ=255) gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc > 1:735057/1‑93 (MQ=255) gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc < 1:4351635/93‑1 (MQ=255) gaTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGAc > 2:3330352/1‑93 (MQ=255) aTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGCGTTATTGGCGAGATAGTGCCAGAACACCAGACa > 2:3628965/1‑93 (MQ=255) aTGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGAGTTATTGGCGAGATAGTGCCAGAACACCAGACa > 2:767640/1‑93 (MQ=255) gTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACata < 1:3723873/93‑1 (MQ=255) gCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGCGCGGCAGCCGGGGGGTATTTGCGCGATAGTGCCAGAACACCAGACATATCg > 2:2312437/1‑93 (MQ=255) gCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCg < 1:3085769/93‑1 (MQ=255) gCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCg < 2:4193754/93‑1 (MQ=255) ccGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCggg < 2:4553727/93‑1 (MQ=255) ccGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCggg > 1:2684431/1‑93 (MQ=255) ccGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCggg < 1:3588757/93‑1 (MQ=255) ccGCGCAAGTTGATTGGCTGAGAAACCAGTGACGTACCGAGCGTCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACGCCAGACATATCggg < 2:2994987/93‑1 (MQ=255) gcCAGTTGATTGGCTGAGAAGCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCa < 2:42921/93‑1 (MQ=255) ccAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAg < 2:2282171/93‑1 (MQ=255) ccAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAg > 1:2886541/1‑93 (MQ=255) aGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACAAATCGGGGCCGGCg > 2:2597393/1‑93 (MQ=255) ttGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGTCAGCGTc > 1:2042625/1‑93 (MQ=255) gATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAg > 1:2455342/1‑93 (MQ=255) gATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAg < 2:4462025/93‑1 (MQ=255) gATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGGACCCAAACCCCAGACATATCGGGGCCAGCGTCAg > 1:3522724/1‑93 (MQ=255) aTTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAgg > 1:2883249/1‑93 (MQ=255) ttGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGgc > 1:3846126/1‑93 (MQ=255) ttGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGgc > 2:2869624/1‑93 (MQ=255) tGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGGGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCATgcc > 1:4613922/1‑93 (MQ=255) cTGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGgccgcc < 2:2339403/93‑1 (MQ=255) tGAGAAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACTCCAGACATATCGGGGCCAGCGTCAGGCCGCCa > 2:4362070/1‑93 (MQ=255) gagaAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAg > 1:1061140/1‑93 (MQ=255) agaAACCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGt < 2:2153954/93‑1 (MQ=255) aaaCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTa < 1:2697110/93‑1 (MQ=255) aCCAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTaaa < 1:804505/93‑1 (MQ=255) ccAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAg < 2:1665525/93‑1 (MQ=255) ccAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAg < 2:1872772/93‑1 (MQ=255) ccAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAg > 2:1368319/1‑93 (MQ=255) cAGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGt < 1:1294281/93‑1 (MQ=255) aGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTc < 2:3559090/93‑1 (MQ=255) aGTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTc < 1:1029588/93‑1 (MQ=255) gTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCa > 1:4106511/1‑93 (MQ=255) gTGACGGACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCa < 1:999232/93‑1 (MQ=255) gACCGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACa < 1:3892144/93‑1 (MQ=255) aCCGAGCGCCACCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAg < 2:2565501/93‑1 (MQ=255) cGAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCCGACATATCGGGGTCAGCGTCAGGCCGCCCGTTAAAGCAAGCAACAgcg > 2:3796998/1‑93 (MQ=255) gcgCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAgcgc > 2:2835988/3‑93 (MQ=255) gAGCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAgcgc > 1:2324363/1‑93 (MQ=255) gCGGCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCAt > 2:2655332/1‑93 (MQ=255) gCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTcc < 2:2591155/93‑1 (MQ=255) gCAGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTcc < 2:4352444/93‑1 (MQ=255) aGCCGGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCAc < 2:161180/93‑1 (MQ=255) | GACTGATAACAAACAGCAGCAAGTACCAGACCAGATGTCGCCCGCGCCAGTTGATTGGCTGAGAAACCAGTGACGGACCGAGCGGCAGCCAGGTGTTATTGGCGAGATAGTGCCAGAACACCAGACATATCGGGGCCAGCGTCAGGCCGCCAGTTAAAGTCAGCAACAGCGCATTCCACG > NC_000913/3847175‑3847354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |