BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,857,264	A→G	G160G (GGT→GGC)	yidK ←	putative cotransporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,857,264	0	A	G	100.0%	742.5 / NA	237	G160G (GGT→GGC)	yidK	putative cotransporter
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (120/117); total (120/117)

Only 100 of 245 total aligned reads displayed.

GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC  >  NC_000913/3857174‑3857353

gTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGcc                                                                                         >  1:794176/1‑93 (MQ=255)

  ccGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGt                                                                                       <  1:1971922/93‑1 (MQ=255)

   cGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTg                                                                                      <  1:4579379/93‑1 (MQ=255)

    gCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTga                                                                                     <  1:4264283/93‑1 (MQ=255)

     ccACTGCCCTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTgag                                                                                    >  2:4556727/1‑93 (MQ=255)

      cACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTgaga                                                                                   <  1:3741049/93‑1 (MQ=255)

       aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa                                                                                  >  2:928231/1‑93 (MQ=255)

       aCTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaa                                                                                  >  2:1970156/1‑93 (MQ=255)

        cTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaaa                                                                                 >  2:54611/1‑93 (MQ=255)

        cTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGaaa                                                                                 >  2:1230006/1‑93 (MQ=255)

         tGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAAt                                                                                >  2:1740233/1‑93 (MQ=255)

          gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               >  2:1006637/1‑93 (MQ=255)

          gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               >  2:3718340/1‑93 (MQ=255)

          gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               <  2:2615048/93‑1 (MQ=255)

          gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               <  1:30185/93‑1 (MQ=255)

          gCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               >  1:2120408/1‑93 (MQ=255)

          accATTGCGCCCAGTCCGCCGATCGCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTCCCAGTAGCCAGATAGCCGCGCCGTGAGAAATc                                                                               <  2:2069223/92‑1 (MQ=255)

           ccATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCt                                                                              <  1:3919633/93‑1 (MQ=255)

           ccATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCt                                                                              <  1:340873/93‑1 (MQ=255)

            cATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTg                                                                             >  1:4340811/1‑93 (MQ=255)

             aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt                                                                            >  1:652312/1‑93 (MQ=255)

             aTTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGt                                                                            <  1:1213553/93‑1 (MQ=255)

               tGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAg                                                                          <  2:2470951/93‑1 (MQ=255)

                gcgcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGc                                                                         <  1:1682961/93‑1 (MQ=255)

                gcgcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGc                                                                         <  1:2451728/93‑1 (MQ=255)

                  gcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGa                                                                       <  1:4147636/93‑1 (MQ=255)

                  gcgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGa                                                                       <  2:2137997/93‑1 (MQ=255)

                   cgcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAt                                                                      <  2:2165249/93‑1 (MQ=255)

                    gcAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGAtt                                                                     <  1:3593722/93‑1 (MQ=255)

                      aGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcc                                                                   >  1:1317757/1‑93 (MQ=255)

                      aGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcc                                                                   >  1:4498365/1‑93 (MQ=255)

                       gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc                                                                  >  2:2758003/1‑93 (MQ=255)

                       gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc                                                                  >  2:3373522/1‑93 (MQ=255)

                       gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc                                                                  <  1:2949720/93‑1 (MQ=255)

                       gTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTccc                                                                  >  1:4543362/1‑93 (MQ=255)

                        tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc                                                                 <  1:913092/93‑1 (MQ=255)

                        tCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTcccc                                                                 >  2:1402440/1‑93 (MQ=255)

                          cgccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGa                                                               <  1:175894/93‑1 (MQ=255)

                            ccgATCCCCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACg                                                             >  2:2287872/1‑93 (MQ=255)

                            ccgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACg                                                             >  1:1506393/1‑93 (MQ=255)

                             cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGt                                                            >  2:155346/1‑93 (MQ=255)

                             cgATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCCATTCCCCGACGt                                                            <  2:4630021/93‑1 (MQ=255)

                              gATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTg                                                           >  1:2898814/1‑93 (MQ=255)

                                tCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGaa                                                         >  1:2528777/1‑93 (MQ=255)

                                    cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg                                                     >  2:50797/1‑93 (MQ=255)

                                    cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg                                                     <  2:319525/93‑1 (MQ=255)

                                    cGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAg                                                     >  1:3266018/1‑93 (MQ=255)

                                      cATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGACAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGc                                                   <  1:1870304/93‑1 (MQ=255)

                                       aTACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCt                                                  >  2:763961/1‑93 (MQ=255)

                                        tACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTg                                                 >  2:4304474/1‑93 (MQ=255)

                                         aCAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGt                                                >  2:623872/1‑93 (MQ=255)

                                         aCAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGt                                                >  1:4565694/1‑93 (MQ=255)

                                            aaaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGa                                             >  1:238622/1‑93 (MQ=255)

                                            aaaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGa                                             >  1:2760191/1‑93 (MQ=255)

                                             aaTTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAg                                            <  2:2786975/93‑1 (MQ=255)

                                              atccccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAgc                                           <  2:3246895/90‑1 (MQ=255)

                                                tCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAgcgc                                         >  2:721642/1‑93 (MQ=255)

                                                  ccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCa                                       >  2:817577/1‑93 (MQ=255)

                                                  ccGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCACGACGTGAAACAGGCTGTTGAGCGCCa                                       >  1:3689560/1‑93 (MQ=255)

                                                   cGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa                                      <  2:2490871/93‑1 (MQ=255)

                                                   cGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCaa                                      <  1:1074360/93‑1 (MQ=255)

                                                    gCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAAc                                     >  1:2286881/1‑93 (MQ=255)

                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 <  2:3545879/93‑1 (MQ=255)

                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 >  1:1027204/1‑93 (MQ=255)

                                                        gACCAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACgcgc                                 <  1:4678190/93‑1 (MQ=255)

                                                          ccAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCg                               >  1:862758/1‑93 (MQ=255)

                                                          ccAAGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCg                               <  2:362475/93‑1 (MQ=255)

                                                            aaGCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGa                             <  2:1111120/93‑1 (MQ=255)

                                                              gCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAga                           >  1:1397372/1‑92 (MQ=255)

                                                              gCAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGt                           <  1:4327013/93‑1 (MQ=255)

                                                               cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa                          <  2:2198465/93‑1 (MQ=255)

                                                               cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa                          <  2:3938507/93‑1 (MQ=255)

                                                               cAAAATTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTa                          <  1:1000142/93‑1 (MQ=255)

                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         >  2:797927/1‑93 (MQ=255)

                                                                aaaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTag                         >  1:2210580/1‑93 (MQ=255)

                                                                 aaaTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTaga                        >  2:3043326/1‑93 (MQ=255)

                                                                   aTTACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAgaga                      <  1:3893401/93‑1 (MQ=255)

                                                                    ttACCAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGaa                     <  2:1658518/93‑1 (MQ=255)

                                                                       ccAGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACaa                  <  2:1333960/93‑1 (MQ=255)

                                                                         aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc                >  1:2410201/1‑93 (MQ=255)

                                                                         aGTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATc                <  1:2543411/93‑1 (MQ=255)

                                                                          gTAGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCg               >  2:3371548/1‑93 (MQ=255)

                                                                           gaGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCgg              <  2:4254259/92‑1 (MQ=255)

                                                                            aGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGc             >  2:1916018/1‑93 (MQ=255)

                                                                            aGCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGc             <  2:2316357/93‑1 (MQ=255)

                                                                             gCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCa            >  1:3976364/1‑93 (MQ=255)

                                                                             gCCAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGCTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCa            >  2:3444039/1‑93 (MQ=255)

                                                                              ccAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAg           >  2:1938035/1‑93 (MQ=255)

                                                                              ccAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAg           >  1:2859294/1‑93 (MQ=255)

                                                                               cAGATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGa          >  2:3069564/1‑93 (MQ=255)

                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        <  1:4062865/93‑1 (MQ=255)

                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        >  1:2164979/1‑93 (MQ=255)

                                                                                 gATAGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGaaa        >  1:3139985/1‑93 (MQ=255)

                                                                                   tAGCCGCTCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGc      <  2:4174019/93‑1 (MQ=255)

                                                                                    aGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCa     >  2:117799/1‑93 (MQ=255)

                                                                                    aGCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCa     <  2:3508123/93‑1 (MQ=255)

                                                                                     gCCGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAg    >  1:4631136/1‑93 (MQ=255)

                                                                                      ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa   <  1:1636906/93‑1 (MQ=255)

                                                                                      ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa   <  2:3975188/93‑1 (MQ=255)

                                                                                      ccGCGCCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGa   <  2:1778553/93‑1 (MQ=255)

GTCCGCCACTGCCATTGCGCGCAGTCCGCCGATCACCGCATACAAAATTCCCGCCAGACCAAGCAAAATTACCAGTAGCCAGATAGCCGCACCGTGAGAAATCTGTAGCGATTCCCCGACGTGAAACAGGCTGTTGAGCGCCAACGCGCCGGAGTAGAGAACAATCGGCAGAAAGCAGAC  >  NC_000913/3857174‑3857353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`