BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,873,493	T→C	C124C (TGT→TGC)	yidX →	putative replicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,873,493	0	T	C	100.0%	842.5 / NA	260	C124C (TGT→TGC)	yidX	putative replicase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/133); total (127/133)

Only 100 of 262 total aligned reads displayed.

CGGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATT  >  NC_000913/3873403‑3873582

cGGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCAc                                                                                         <  1:455895/93‑1 (MQ=255)

 ggCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCAcc                                                                                        <  1:4001855/93‑1 (MQ=255)

  gCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCa                                                                                       <  1:3607842/93‑1 (MQ=255)

    acaATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAgg                                                                                     >  1:1444683/1‑93 (MQ=255)

      aaTATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTc                                                                                   >  2:2590807/1‑93 (MQ=255)

       atatCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCa                                                                                  >  1:3087475/1‑93 (MQ=255)

       atatCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCa                                                                                  >  2:3203110/1‑93 (MQ=255)

         atCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACt                                                                                >  2:801898/1‑93 (MQ=255)

          tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               >  2:1130626/1‑93 (MQ=255)

          tCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTg                                                                               <  1:1635824/93‑1 (MQ=255)

           cGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTgg                                                                              <  1:4207066/93‑1 (MQ=255)

           cGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTgg                                                                              <  1:2562413/93‑1 (MQ=255)

           cGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTgg                                                                              <  1:3930270/93‑1 (MQ=255)

            gCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGa                                                                             >  1:2174071/1‑93 (MQ=255)

              tttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaa                                                                           >  2:178761/1‑93 (MQ=255)

              tttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaa                                                                           >  2:3223958/1‑93 (MQ=255)

               ttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaaa                                                                          >  2:3140226/1‑93 (MQ=255)

               ttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGaaaa                                                                          <  1:2362852/93‑1 (MQ=255)

               ttACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAAAGCATAATAATTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTAGaaaa                                                                          <  2:4679758/93‑1 (MQ=255)

                tactactacTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAAc                                                                         >  2:938276/1‑93 (MQ=255)

                 actactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAAcc                                                                        <  2:3596067/93‑1 (MQ=255)

                   tactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTa                                                                      >  2:4233719/1‑93 (MQ=255)

                   tactactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTa                                                                      >  2:3969803/1‑93 (MQ=255)

                    tctactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaa                                                                     <  2:2651993/92‑1 (MQ=255)

                    actactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaa                                                                     <  2:2266379/93‑1 (MQ=255)

                     ctactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaa                                                                    <  1:4267498/93‑1 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:230476/1‑93 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   <  1:2684551/93‑1 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   <  1:3114610/93‑1 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   <  1:2470838/93‑1 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:4653890/1‑93 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:1535546/1‑93 (MQ=255)

                      tactGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTaaaa                                                                   >  2:2780665/1‑93 (MQ=255)

                       actGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAg                                                                  <  2:3723357/93‑1 (MQ=255)

                         tGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGc                                                                >  2:816284/1‑93 (MQ=255)

                          ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               >  2:3401177/1‑93 (MQ=255)

                          ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               >  2:3030906/1‑93 (MQ=255)

                          ggAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGca                                                               >  1:3436690/1‑93 (MQ=255)

                           gAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGcac                                                              >  1:4603939/1‑93 (MQ=255)

                             aTAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGTCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACaa                                                            >  1:1553014/1‑93 (MQ=255)

                             aTAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACaa                                                            >  1:1457571/1‑93 (MQ=255)

                                aCGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATcc                                                         <  2:706195/93‑1 (MQ=255)

                                 cGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCa                                                        <  1:1229609/93‑1 (MQ=255)

                                  gaagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCAt                                                       >  1:2748350/1‑93 (MQ=255)

                                   aagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      <  1:3673506/93‑1 (MQ=255)

                                   aagaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATg                                                      <  1:1322317/93‑1 (MQ=255)

                                    agaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATga                                                     >  2:4522108/1‑93 (MQ=255)

                                    agaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATga                                                     >  1:853624/1‑93 (MQ=255)

                                     gaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATgag                                                    >  1:639739/1‑93 (MQ=255)

                                     gaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATgag                                                    >  1:3323023/1‑93 (MQ=255)

                                     gaagaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATgag                                                    >  1:4132248/1‑93 (MQ=255)

                                       agaaAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACAAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGaa                                                  >  2:2174606/1‑93 (MQ=255)

                                       agaaAAGGCACTGGCAACGCATTATGGGTTTGCCTGTGGAGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGaa                                                  >  2:589949/1‑93 (MQ=255)

                                          aaaGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGTTCACTGGAAAACCTAAAAGGCACAATCCATGAGaaaaa                                               <  2:1829988/93‑1 (MQ=255)

                                          aaaGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGaaaaa                                               <  2:1193602/93‑1 (MQ=255)

                                          aaaGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGaaaaa                                               <  2:560333/93‑1 (MQ=255)

                                            aGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATa                                             >  2:3848965/1‑93 (MQ=255)

                                             ggCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaa                                            >  1:3013285/1‑93 (MQ=255)

                                               cACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaaa                                          <  1:2615273/93‑1 (MQ=255)

                                               cACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaaa                                          <  2:4010618/93‑1 (MQ=255)

                                                aCTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaaaa                                         <  1:1852558/93‑1 (MQ=255)

                                                aCTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATaaaaa                                         >  1:4412662/1‑93 (MQ=255)

                                                 cTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAAc                                        >  1:1066212/1‑93 (MQ=255)

                                                  tGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACa                                       <  1:753842/93‑1 (MQ=255)

                                                   ggCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACAt                                      <  1:3792240/93‑1 (MQ=255)

                                                    gCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     >  1:443234/1‑93 (MQ=255)

                                                    gCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATg                                     >  1:1569771/1‑93 (MQ=255)

                                                     cAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATgg                                    <  1:2072146/93‑1 (MQ=255)

                                                     cAACGCATTATGGTTTTGCCTGTGGTATTCAGCACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATgg                                    <  1:4683926/93‑1 (MQ=255)

                                                      aaCGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGa                                   >  2:1103210/1‑93 (MQ=255)

                                                        cGCATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGAtt                                 <  2:2100104/93‑1 (MQ=255)

                                                          cATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTAc                               <  2:2722390/93‑1 (MQ=255)

                                                          cATTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTAc                               >  2:3264296/1‑93 (MQ=255)

                                                           aTTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACt                              >  1:386396/1‑93 (MQ=255)

                                                           aTTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACt                              >  2:2998203/1‑93 (MQ=255)

                                                           aTTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACt                              <  1:3556826/93‑1 (MQ=255)

                                                           aTTATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACt                              >  2:3435699/1‑93 (MQ=255)

                                                            ttATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTc                             >  1:3211875/1‑93 (MQ=255)

                                                            ttATGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTc                             >  2:1429372/1‑93 (MQ=255)

                                                              aTGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCaa                           >  1:188167/1‑93 (MQ=255)

                                                               tGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCaaa                          >  2:1146337/1‑93 (MQ=255)

                                                               tGGTTTTGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCaaa                          <  2:1009427/93‑1 (MQ=255)

                                                                  ttttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGt                       <  1:1972935/93‑1 (MQ=255)

                                                                   tttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTg                      >  1:2213109/1‑93 (MQ=255)

                                                                    ttGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGa                     <  1:4185420/93‑1 (MQ=255)

                                                                     tGCCTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGAt                    <  1:113001/93‑1 (MQ=255)

                                                                       ccTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATgg                  <  2:1474221/93‑1 (MQ=255)

                                                                        cTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGc                 >  1:93381/1‑93 (MQ=255)

                                                                        cTGTGGTGTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGc                 <  1:452089/93‑1 (MQ=255)

                                                                          gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               <  2:2840242/93‑1 (MQ=255)

                                                                          gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               >  2:4667828/1‑93 (MQ=255)

                                                                          gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               >  2:1305990/1‑93 (MQ=255)

                                                                          gtggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGt               <  1:1740623/93‑1 (MQ=255)

                                                                           tggtgTTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGtt              >  2:2220368/1‑93 (MQ=255)

                                                                               gtTCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAc          >  1:228742/1‑93 (MQ=255)

                                                                                 tCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCAGAATCCATGAGAAAAATAAAAACATGCATTACTCAAAGGTGATCGCGTTCTAcca        <  2:4489859/93‑1 (MQ=255)

                                                                                 tCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAcca        >  1:2867185/1‑93 (MQ=255)

                                                                                 tCAACACTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAcca        <  1:4319076/93‑1 (MQ=255)

                                                                                     cacTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTAccatcca    <  1:2653731/93‑1 (MQ=255)

                                                                                       cTGCACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCAtt  >  1:4331749/1‑93 (MQ=255)

CGGCACAATATCGCTTTACTACTACTGGAATAACGAAGAAGAAAAGGCACTGGCAACGCATTATGGTTTTGCCTGTGGTGTTCAACACTGTACCAGGTCACTGGAAAACCTAAAAGGCACAATCCATGAGAAAAATAAAAACATGGATTACTCAAAGGTGATGGCGTTCTACCATCCATT  >  NC_000913/3873403‑3873582

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`