BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,875,213	T→C	intergenic (‑120/+120)	b3698 ← / ← gyrB	hypothetical protein/DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,875,213	0	T	C	100.0%	599.2 / NA	191	intergenic (‑120/+120)	b3698/gyrB	hypothetical protein/DNA gyrase subunit B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (102/89); total (102/89)

Only 100 of 209 total aligned reads displayed.

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

 cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGcc                                                                                        >  1:341710/1‑93 (MQ=255)

 cccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGcc                                                                                        >  1:2202835/1‑93 (MQ=255)

   cAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCgg                                                                                      <  2:1222104/93‑1 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGcccgg                                                                                     >  1:998255/1‑90 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGcccgg                                                                                     >  1:156775/1‑90 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGa                                                                                     >  2:4403419/1‑93 (MQ=255)

     aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGAt                                                                                    >  2:1051461/1‑93 (MQ=255)

      aaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATg                                                                                   >  1:479792/1‑93 (MQ=255)

       aaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgc                                                                                  >  1:532125/1‑93 (MQ=255)

       aaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCCTTTCTTATAGCTTCTCGCCGGATgc                                                                                  >  1:4401843/1‑93 (MQ=255)

        aGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgcg                                                                                 >  1:1977081/1‑93 (MQ=255)

        aGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgcg                                                                                 >  2:2590701/1‑93 (MQ=255)

         gTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgcgg                                                                                <  2:3627760/93‑1 (MQ=255)

           ataGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgcggcg                                                                              >  2:2281980/1‑93 (MQ=255)

            taGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATgcggcgg                                                                             >  2:3639632/1‑92 (MQ=255)

               aTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGaa                                                                          <  2:3740393/93‑1 (MQ=255)

                tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAAc                                                                         <  2:3910588/93‑1 (MQ=255)

                tttGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGAGaat                                                                         >  2:3030052/1‑92 (MQ=255)

                   gCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGcc                                                                      <  1:2866716/93‑1 (MQ=255)

                     gggAAGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCtt                                                                    <  2:635017/93‑1 (MQ=255)

                       gatgacAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTAt                                                                  >  2:3087583/1‑93 (MQ=255)

                        atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACACCTTATc                                                                 >  1:1024973/1‑93 (MQ=255)

                        atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATGCGGCGTGAACGCGCTATc                                                                 >  2:2145610/1‑93 (MQ=255)

                         tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATcc                                                                <  1:2879760/93‑1 (MQ=255)

                           atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGCTGCGGCGTGAACGCCTTATCCgg                                                              >  1:2310535/1‑93 (MQ=255)

                           atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCgg                                                              >  2:1485070/1‑93 (MQ=255)

                               ttGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGAACCCTTATTCGGccca                                                          >  2:247937/1‑91 (MQ=38)

                                tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAc                                                         <  1:3182550/93‑1 (MQ=255)

                                 gCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACa                                                        <  2:4542203/93‑1 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGGTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACaaa                                                      <  1:3294223/93‑1 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTATTCCGCCTACaaa                                                      >  2:2869791/1‑93 (MQ=38)

                                    gATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGGCTTATCCGGCCTACaaaa                                                     >  2:4439926/1‑93 (MQ=255)

                                     aTTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAt                                                    >  2:1361220/1‑93 (MQ=255)

                                      ttGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGGCTACAAAAta                                                   >  1:277816/1‑92 (MQ=255)

                                       tGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAAAGCCTTATCCGGCCTACAAAATCa                                                  >  1:3755586/1‑93 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt                                                 <  1:1358537/93‑1 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCAt                                                 <  1:1400882/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGa                                               <  2:4467848/93‑1 (MQ=255)

                                           gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaa                                              <  2:4609258/93‑1 (MQ=255)

                                           gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaa                                              >  2:541433/1‑93 (MQ=255)

                                           gAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAAAGCCTTATCCGGCCTACAAAATCATGaa                                              >  1:2631554/1‑93 (MQ=255)

                                            aaaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaaa                                             >  1:3124489/1‑93 (MQ=255)

                                             aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaaaa                                            <  1:4155367/93‑1 (MQ=255)

                                             aaTAAAAAGGGACGAGATGATCTCAACCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGaaaa                                            <  1:1481962/93‑1 (MQ=21)

                                              aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACTCCTTATACGGCCTACAAAATCATGaaaaa                                           >  2:3834892/1‑92 (MQ=37)

                                              aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAt                                           <  2:1749094/93‑1 (MQ=255)

                                               tAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACAAAATCATGAAAAtt                                          >  2:793566/1‑93 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTATCCGGCCTACAAAATCATGAAAAATCaa                                       >  1:1843840/1‑93 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATTCGGCCTACAAAATCATGAAAATTCaa                                       >  2:2914456/1‑93 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCaa                                       <  2:3260702/93‑1 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCaa                                       >  2:2223796/1‑93 (MQ=255)

                                                    aGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATa                                     >  1:2053401/1‑93 (MQ=255)

                                                        cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACAtt                                 <  2:1876526/93‑1 (MQ=255)

                                                         ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTg                                <  1:1602971/93‑1 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTATTCGGCCTACAAAATCATGAAAATTCAATAAATTGc                               >  2:3005204/1‑93 (MQ=21)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGc                               <  1:2692340/93‑1 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGc                               <  1:2434289/93‑1 (MQ=255)

                                                            gatgatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCaa                             <  2:1410834/93‑1 (MQ=255)

                                                              tgatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCTGCCTACAAAATCATGAAAAGTCAATAAAATGCAAGa                           >  2:2379229/1‑93 (MQ=21)

                                                              tgatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGa                           >  2:3526916/1‑93 (MQ=255)

                                                              tgatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGa                           <  2:3070311/93‑1 (MQ=255)

                                                              tgatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGa                           <  1:1373599/93‑1 (MQ=255)

                                                                atCTCCGCCCTTTTCTTATAGCTTCTCGCCGGCTGCGGGGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGGAAGaat                         >  1:2162397/1‑91 (MQ=21)

                                                                atCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGGGGGGACGCCTTATCCGGCCTACCAAAACCTTAAAAATCCATACATTTCaaaaat                         >  2:244988/1‑89 (MQ=16)

                                                                atCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtt                         <  2:4341691/93‑1 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        <  1:4246181/93‑1 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAAAGCCCTATCCGGCCTCCAAAAACATGAAAAATTAATAAATTGCAAGAttt                        >  1:902750/1‑93 (MQ=21)

                                                                  ctcCGCCCTTTTCTTATAGCTTCTCGCCGGGTGCGGCGGGAAAGCCTTTTTCGGGCCACCAAAACCTTAAAAATCAATACAATTCAAGAtttt                       >  2:1727158/1‑93 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      >  1:701483/1‑93 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      <  1:684185/93‑1 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      <  1:4036434/93‑1 (MQ=255)

                                                                    ccGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCg                     <  2:3812371/93‑1 (MQ=255)

                                                                    ccGCCCTTTTCTTATAGCTTCTCGCCGGATGCCGCGCGGACGCCTTATCCGGCCTACAAAATTATGAAAATTCAATATATTTCAAGATTTTCg                     >  2:3022921/1‑93 (MQ=21)

                                                                       cccTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAg                  <  1:984448/93‑1 (MQ=255)

                                                                       cccTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAg                  <  2:3405621/93‑1 (MQ=255)

                                                                        ccTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAgg                 <  1:3929687/93‑1 (MQ=255)

                                                                        ccTTTTCTTATAGCTTCTCGCCGGATGCGGCGGGAACGCCTTATTCCGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTTGTatg                 >  2:1884527/1‑91 (MQ=21)

                                                                         cTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGc                <  2:2934123/93‑1 (MQ=255)

                                                                         cTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGc                <  1:3380749/93‑1 (MQ=255)

                                                                         cTTTTCTTATAGCTTCTCGCCGGATGCGGCGGGAAAGCCCTATTCCGCCCACAAAAAAATGAAAAATTAATACAATTCAAGATTTTTGTAGGc                >  2:4099287/1‑93 (MQ=255)

                                                                          ttttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGcc               >  1:4553425/1‑93 (MQ=255)

                                                                          ttttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCCGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTTGTAgggc               >  1:4348195/1‑91 (MQ=21)

                                                                          ttttCTTATAGCTTCTCGCCGGATGCGGCGTGAAAGCCTTTTCCGGCCTTCAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAggac               >  2:2717252/1‑91 (MQ=21)

                                                                           tttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAATCAATACATTGCAAGATTTTCGTAGGCCt              >  1:2017587/1‑93 (MQ=255)

                                                                            ttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTg             <  1:3958575/93‑1 (MQ=255)

                                                                               ttATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          <  1:1821464/93‑1 (MQ=255)

                                                                               ttATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAATTAATACATTTCAAGATTTTTGTAGGCCTGATa          >  2:3544069/1‑93 (MQ=18)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         <  1:3480589/93‑1 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         <  2:406556/93‑1 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         <  1:3014717/93‑1 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         <  2:3505788/93‑1 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         >  1:766265/1‑93 (MQ=255)

                                                                                 ataGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAg        >  1:3658895/1‑93 (MQ=255)

                                                                                  taGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       >  1:2234072/1‑93 (MQ=255)

                                                                                  taGCTTCTCGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       <  1:1182907/93‑1 (MQ=255)

                                                                                     cttctcGCCGGATGCGGCGTGAACGCCTTATCCGTCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTGCGTAGTCCTGCTAAGCGTa    <  2:4558658/93‑1 (MQ=17)

                                                                                     cttctcGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa    <  2:4316797/93‑1 (MQ=255)

                                                                                      ttctcGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAg   >  1:1880773/1‑93 (MQ=255)

                                                                                      ttctcGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAg   >  1:3786180/1‑93 (MQ=255)

                                                                                      ttctcGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAg   >  1:4364708/1‑93 (MQ=255)

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 17 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`