BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	416,945	A→G	T194A (ACG→GCG)	phoB →	positive response regulator for pho regulon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	416,945	0	A	G	100.0%	395.8 / NA	126	T194A (ACG→GCG)	phoB	positive response regulator for pho regulon
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (62/64); total (62/64)

Only 100 of 133 total aligned reads displayed.

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        >  2:737687/1‑93 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        <  2:1761668/93‑1 (MQ=255)

 aCTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCgg                                                                                        <  1:4384302/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  1:3893455/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       >  2:3543621/1‑93 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  2:1979338/93‑1 (MQ=255)

  cTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGt                                                                                       <  1:204536/93‑1 (MQ=255)

   ttttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGTACTAACGTGTATGTGGAAGACCGCGCGGTc                                                                                      >  1:4164083/1‑93 (MQ=255)

   ttttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTc                                                                                      <  2:1215158/93‑1 (MQ=255)

    tttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCg                                                                                     >  1:2113120/1‑93 (MQ=255)

     ttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGa                                                                                    >  1:1576299/1‑93 (MQ=255)

     ttttATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGa                                                                                    <  1:4419914/93‑1 (MQ=255)

           gACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCca                                                                              <  2:2894086/93‑1 (MQ=255)

           gACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGGGTATGTGGAAGACCGCGCGGTCGATGTCca                                                                              <  1:1448983/93‑1 (MQ=255)

            aCGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCcac                                                                             >  1:1137488/1‑93 (MQ=255)

            aCGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCcac                                                                             >  1:432873/1‑93 (MQ=255)

             cGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCcaca                                                                            <  1:3587821/93‑1 (MQ=255)

              gCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACAt                                                                           <  2:2735418/93‑1 (MQ=255)

              gCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACAt                                                                           >  2:937906/1‑93 (MQ=255)

               cATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACAtt                                                                          >  1:1582630/1‑93 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         <  1:827737/93‑1 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         >  1:2955566/1‑93 (MQ=255)

                aTCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtc                                                                         >  1:1674044/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  2:878436/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  2:2266778/1‑93 (MQ=255)

                 tCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcg                                                                        >  1:3733061/1‑93 (MQ=255)

                   cTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtc                                                                      >  1:1352316/1‑93 (MQ=255)

                   cTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtc                                                                      >  2:3704122/1‑93 (MQ=255)

                    tGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtcg                                                                     >  2:3229597/1‑93 (MQ=255)

                    tGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATtcgtcg                                                                     >  1:682340/1‑93 (MQ=255)

                      aGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGcc                                                                   <  2:3600268/93‑1 (MQ=255)

                      aGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGcc                                                                   >  2:1629882/1‑93 (MQ=255)

                      aGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGcc                                                                   <  1:1394761/93‑1 (MQ=255)

                       gcgcGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCt                                                                  <  1:1932931/93‑1 (MQ=255)

                         gcgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGc                                                                <  2:2542443/93‑1 (MQ=255)

                         gcgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGc                                                                >  2:2732156/1‑93 (MQ=255)

                         gcgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGc                                                                >  1:393994/1‑93 (MQ=255)

                          cgTGTACAGCCGCGAGCAGCTGTTAAACCACGTCGGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCg                                                               <  2:286560/93‑1 (MQ=255)

                           gtgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGt                                                              <  2:3277346/93‑1 (MQ=255)

                           gtgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGt                                                              <  1:2264724/93‑1 (MQ=255)

                            tgtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTa                                                             >  1:3278683/1‑93 (MQ=255)

                             gtACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaa                                                            <  1:3485916/93‑1 (MQ=255)

                              tACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTaaa                                                           <  1:4205215/93‑1 (MQ=255)

                               aCAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAg                                                          <  1:546479/93‑1 (MQ=255)

                               aCAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAAAGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAg                                                          >  2:1550468/1‑93 (MQ=255)

                                cAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCACGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGc                                                         <  1:4064465/93‑1 (MQ=255)

                                 aGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCa                                                        <  1:1941078/93‑1 (MQ=255)

                                  gCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCAc                                                       >  2:2699504/1‑93 (MQ=255)

                                   ccGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACt                                                      <  1:2221302/93‑1 (MQ=255)

                                    cgcgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTg                                                     <  1:4227880/93‑1 (MQ=255)

                                     gcgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTgg                                                    <  2:885269/93‑1 (MQ=255)

                                     gcgAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTgg                                                    >  1:4321786/1‑93 (MQ=255)

                                       gAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAg                                                  >  1:4132492/1‑93 (MQ=255)

                                        agcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGc                                                 >  2:4113205/1‑93 (MQ=255)

                                         gcagcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGcc                                                <  2:3588746/93‑1 (MQ=255)

                                           agcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcg                                              >  1:3143287/1‑93 (MQ=255)

                                           agcTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcg                                              >  2:4225307/1‑93 (MQ=255)

                                            gcTGTTAAACCACGTATGGGGAACTAACGTGGATGTGGAAGACCGCGCGGTCGATGTCCACATTGGTCGCCTGCGTAAAGCACTGGAGCGcgg                                             >  2:3673318/1‑93 (MQ=255)

                                              tGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcg                                           <  1:232402/93‑1 (MQ=255)

                                              tGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcg                                           >  2:3611683/1‑93 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCNGAAAGCACTGGAGCCcggcgg                                          >  1:2300584/1‑93 (MQ=255)

                                               gTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCcggcgg                                          >  1:1730553/1‑93 (MQ=255)

                                                ttAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCggg                                         >  2:2325232/1‑93 (MQ=255)

                                                ttAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCggg                                         <  1:3504553/93‑1 (MQ=255)

                                                ttAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCggg                                         >  2:1574537/1‑93 (MQ=255)

                                                 tAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGc                                        >  2:4364905/1‑93 (MQ=255)

                                                    aCCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATg                                     >  2:1982923/1‑93 (MQ=255)

                                                         gTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGc                                <  1:3611364/93‑1 (MQ=255)

                                                         gTCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGc                                >  1:2753354/1‑93 (MQ=255)

                                                          tCTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCa                               >  1:995429/1‑93 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCCCATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              <  1:3954937/93‑1 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              <  2:3951089/93‑1 (MQ=255)

                                                           cTGGGGAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCAt                              <  1:599401/93‑1 (MQ=255)

                                                             ggggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATgg                            >  1:3134994/1‑93 (MQ=255)

                                                             ggggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATgg                            <  1:1216943/93‑1 (MQ=255)

                                                              gggAACTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGt                           <  1:4342894/93‑1 (MQ=255)

                                                                   cTAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGa                      <  2:39992/93‑1 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     >  1:1023/1‑93 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     <  1:4135894/93‑1 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     <  1:701692/93‑1 (MQ=255)

                                                                    tAACGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAc                     <  1:1740968/93‑1 (MQ=255)

                                                                     aaCGTGTATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGAcc                    <  2:61106/93‑1 (MQ=255)

                                                                        gtgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTg                 >  1:48984/1‑93 (MQ=255)

                                                                         tgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                >  1:2529338/1‑93 (MQ=255)

                                                                         tgtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                >  1:1881272/1‑93 (MQ=255)

                                                                         ggtATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgc                <  2:3555604/92‑1 (MQ=255)

                                                                           tATGTGGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTgcgc              <  1:2971485/93‑1 (MQ=255)

                                                                             tgtgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCgg            <  2:3959034/93‑1 (MQ=255)

                                                                              gtgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGt           >  1:4438052/1‑93 (MQ=255)

                                                                               tgGAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTa          >  2:4522899/1‑93 (MQ=255)

                                                                                ggAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTAc         <  1:4591237/93‑1 (MQ=255)

                                                                                ggAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTAc         <  1:4624053/93‑1 (MQ=255)

                                                                                 gAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACa        <  1:1180567/93‑1 (MQ=255)

                                                                                 gAAGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACa        <  1:3453182/93‑1 (MQ=255)

                                                                                   aGACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAgg      >  2:1007972/1‑93 (MQ=255)

                                                                                    gACCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGa     >  2:2871967/1‑93 (MQ=255)

                                                                                     aCCGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGat    <  2:3845580/93‑1 (MQ=255)

                                                                                      ccGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGata   <  2:3168081/93‑1 (MQ=255)

                                                                                      ccGCGCGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGata   <  2:3322415/93‑1 (MQ=255)

                                                                                       cgcgcgGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGatat  <  1:779301/93‑1 (MQ=255)

CACTTTTTTATGACGCATCCTGAGCGCGTGTACAGCCGCGAGCAGCTGTTAAACCACGTCTGGGGAACTAACGTGTATGTGGAAGACCGCACGGTCGATGTCCACATTCGTCGCCTGCGTAAAGCACTGGAGCCCGGCGGGCATGACCGCATGGTGCAGACCGTGCGCGGTACAGGATAT  >  NC_000913/416855‑417034

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`