BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,915,043	G→C	A284G (GCC→GGC)	atpG ←	membrane‑bound ATP synthase, F1 sector, gamma‑subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,915,043	0	G	C	100.0%	778.6 / NA	254	A284G (GCC→GGC)	atpG	membrane‑bound ATP synthase, F1 sector, gamma‑subunit
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (122/132); total (122/132)

Only 100 of 285 total aligned reads displayed.

TTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC  >  NC_000913/3914953‑3915131

ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGccc                                                                                        <  1:3038325/93‑1 (MQ=255)

ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGccc                                                                                        >  2:3629067/1‑93 (MQ=255)

 tCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGcccc                                                                                       <  2:1998518/93‑1 (MQ=255)

  cGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCcccc                                                                                      <  1:3265239/93‑1 (MQ=255)

    aCGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCg                                                                                    >  2:3953065/1‑93 (MQ=255)

     cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATATCCTGTTTAAACCGCGGCGCCCCCCga                                                                                   <  2:2715623/93‑1 (MQ=255)

       tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCgaga                                                                                 <  1:3456273/93‑1 (MQ=255)

       tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCgaga                                                                                 >  2:4657138/1‑93 (MQ=255)

        cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATACCCTGTTTAAACCGCGGCGCCCCCCGAGAc                                                                                <  2:1526867/93‑1 (MQ=255)

        cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAGCCGCGGCGCCCCCCGAGAc                                                                                <  2:1412870/93‑1 (MQ=255)

        cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGAc                                                                                >  1:2955443/1‑93 (MQ=255)

            tACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtc                                                                            >  1:3064967/1‑93 (MQ=255)

              cGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtctc                                                                          <  1:1667016/93‑1 (MQ=255)

              cGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtctc                                                                          <  1:3496295/93‑1 (MQ=255)

              cGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtctc                                                                          <  2:3672554/93‑1 (MQ=255)

              cGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtctc                                                                          <  2:3196571/93‑1 (MQ=255)

              cGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAtctc                                                                          <  1:2843799/93‑1 (MQ=255)

                   ccGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGa                                                                     <  2:2850313/93‑1 (MQ=255)

                   ccGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGa                                                                     >  2:4251206/1‑93 (MQ=255)

                     gATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGt                                                                   <  2:1265128/93‑1 (MQ=255)

                       ttACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTc                                                                 >  1:3373937/1‑93 (MQ=255)

                        tACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTcc                                                                <  2:481548/93‑1 (MQ=255)

                          ccTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTg                                                              >  1:4200934/1‑93 (MQ=255)

                           cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                             >  2:2441870/1‑93 (MQ=255)

                           cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                             >  2:1896921/1‑93 (MQ=255)

                            tGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAg                                                            >  1:4392001/1‑93 (MQ=255)

                                cAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGGTCCTGAGTAAt                                                        >  1:2383015/1‑93 (MQ=255)

                                 aaTCTTTCCAGTAGCCATCTTAAGTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATg                                                       <  2:1318317/93‑1 (MQ=255)

                                   tCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCt                                                     >  1:2143573/1‑93 (MQ=255)

                                     tttCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTgg                                                   >  2:810036/1‑93 (MQ=255)

                                        ccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCt                                                <  2:4039968/93‑1 (MQ=255)

                                        ccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCt                                                >  1:2780197/1‑93 (MQ=255)

                                         cAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTg                                               <  1:3568659/93‑1 (MQ=255)

                                          aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                              >  2:2113424/1‑93 (MQ=255)

                                          aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                              >  2:3461833/1‑93 (MQ=255)

                                            tAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACg                                            <  1:4050307/93‑1 (MQ=255)

                                             aGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGa                                           <  2:1636629/93‑1 (MQ=255)

                                             aGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGa                                           >  2:4124/1‑93 (MQ=255)

                                               ccATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGc                                         <  1:3080991/93‑1 (MQ=255)

                                                cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                        >  1:140326/1‑93 (MQ=255)

                                                cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                        >  1:2578110/1‑93 (MQ=255)

                                                cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                        >  1:1245458/1‑93 (MQ=255)

                                                cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                        >  1:697283/1‑93 (MQ=255)

                                                 aTCTTAAATCCTCTACGAAATAATCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCTGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                       >  2:4680501/1‑93 (MQ=255)

                                                 aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGTCCTGACGAGCtt                                       <  1:2533845/93‑1 (MQ=255)

                                                 aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                       <  1:3108262/93‑1 (MQ=255)

                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAACCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                      <  1:2308665/93‑1 (MQ=255)

                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                      >  2:33188/1‑93 (MQ=255)

                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                      >  1:969413/1‑93 (MQ=255)

                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                      >  2:623652/1‑93 (MQ=255)

                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                      >  1:2676560/1‑93 (MQ=255)

                                                     tAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                   >  1:1983379/1‑93 (MQ=255)

                                                       aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                 >  1:4011970/1‑93 (MQ=255)

                                                        aTCCTCTACGAAATAGCCTGTTCAAAACGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                <  2:4360679/93‑1 (MQ=255)

                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttgga                                >  2:98697/1‑91 (MQ=255)

                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                <  1:3957341/93‑1 (MQ=255)

                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                <  2:3766950/93‑1 (MQ=255)

                                                          ccTCTACGAAATAACCTGTTTAAGCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata                              <  2:237279/93‑1 (MQ=255)

                                                          ccTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTAGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata                              >  1:475017/1‑93 (MQ=255)

                                                             ctACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCa                           <  2:2954138/93‑1 (MQ=255)

                                                              tACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCaa                          <  1:4276133/93‑1 (MQ=255)

                                                              tACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCaa                          <  1:1758733/93‑1 (MQ=255)

                                                               aCGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAc                         <  2:4431455/93‑1 (MQ=255)

                                                               aCGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAc                         <  2:229902/93‑1 (MQ=255)

                                                                cGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                        <  2:2623141/93‑1 (MQ=255)

                                                                cGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                        <  1:617107/93‑1 (MQ=255)

                                                                 gAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTg                       >  1:3639953/1‑93 (MQ=255)

                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTTGCCTGACGAGCTTTGTTGTATACCAAATGc                      >  2:382372/1‑93 (MQ=255)

                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                      <  1:27555/93‑1 (MQ=255)

                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                      <  1:3182412/93‑1 (MQ=255)

                                                                  aaaTAACCTGTTAAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                      <  2:4462863/93‑1 (MQ=255)

                                                                    aTAACCTGTTTAAACCGCAGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGAAg                    >  2:3099646/1‑93 (MQ=255)

                                                                     tAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGc                   <  2:2837040/93‑1 (MQ=255)

                                                                      aaCCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGct                  >  1:1850677/1‑93 (MQ=255)

                                                                       aCCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctc                 >  1:1370850/1‑93 (MQ=255)

                                                                       aCCTGTTGAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctc                 <  1:1333702/93‑1 (MQ=255)

                                                                        ccTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct                >  1:3339457/1‑93 (MQ=255)

                                                                        ccTGTTTAAACCGCGGCGCCCCACGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct                >  1:2732121/1‑93 (MQ=255)

                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt              >  1:3801565/1‑93 (MQ=255)

                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt              >  1:3679232/1‑93 (MQ=255)

                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt              >  2:1025329/1‑93 (MQ=255)

                                                                           gTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa             >  2:743169/1‑93 (MQ=255)

                                                                           gTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa             <  1:2620125/93‑1 (MQ=255)

                                                                           gTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGAGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa             >  1:106229/1‑93 (MQ=255)

                                                                            tttAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa            <  1:1158414/93‑1 (MQ=255)

                                                                            tttAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa            >  1:3911844/1‑93 (MQ=255)

                                                                            tttAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTaa            <  1:2477765/93‑1 (MQ=255)

                                                                             ttAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt           <  2:503810/93‑1 (MQ=255)

                                                                             ttAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAAt           >  2:3561112/1‑93 (MQ=255)

                                                                               aaaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa         <  1:1916620/93‑1 (MQ=255)

                                                                               aaaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa         <  1:2888526/93‑1 (MQ=255)

                                                                               aaaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa         <  1:2222132/93‑1 (MQ=255)

                                                                                aaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg        <  1:532682/93‑1 (MQ=255)

                                                                                  ccGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGATGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGc      <  1:875533/93‑1 (MQ=255)

                                                                                  ccGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGc      >  1:2281899/1‑93 (MQ=255)

                                                                                  ccGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGc      <  2:882033/93‑1 (MQ=255)

                                                                                   cgcgGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCt     <  2:3903534/93‑1 (MQ=255)

                                                                                    gcggcgCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTg    <  2:1866621/93‑1 (MQ=255)

                                                                                     cggcgcCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgc   <  2:2551805/93‑1 (MQ=255)

                                                                                      ggcgccCCCCGAGACGATCTCGGTGAGGTCCTGAGGAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgcc  >  2:4205305/1‑93 (MQ=255)

TTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCC  >  NC_000913/3914953‑3915131

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`