BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,935,727	C→T	P270S (CCA→TCA)	rbsK →	ribokinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,935,727	0	C	T	100.0%	956.5 / NA	264	P270S (CCA→TCA)	rbsK	ribokinase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (145/119); total (145/119)

Only 100 of 267 total aligned reads displayed.

GTTCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAACCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGAA  >  NC_000913/3935637‑3935816

gTTCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCa                                                                                         >  2:3620251/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAcatcat                                                                                        >  1:2685040/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        >  1:3138917/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        <  2:650118/93‑1 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        >  1:1559075/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        >  1:1834957/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        >  1:980081/1‑93 (MQ=255)

 ttCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAt                                                                                        >  1:832967/1‑93 (MQ=255)

  tCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCAtt                                                                                       <  1:1680594/93‑1 (MQ=255)

   ccTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTg                                                                                      <  2:2854485/93‑1 (MQ=255)

    cTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGc                                                                                     <  1:2620333/93‑1 (MQ=255)

    cTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGc                                                                                     >  1:2140267/1‑93 (MQ=255)

     tGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGcc                                                                                    >  2:3545168/1‑93 (MQ=255)

      ggATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCa                                                                                   >  2:4259728/1‑93 (MQ=255)

        gttCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCaga                                                                                 <  1:1533714/92‑1 (MQ=255)

        aTTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCaga                                                                                 <  1:3272528/93‑1 (MQ=255)

         ttCCGGGTGCAGGCTGTCGATACCATTGCTGTCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCagag                                                                                <  2:282420/93‑1 (MQ=255)

         ttCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCagag                                                                                <  2:310100/93‑1 (MQ=255)

             gggTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGa                                                                            >  1:688683/1‑93 (MQ=255)

             gggTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGa                                                                            >  2:2182788/1‑93 (MQ=255)

              ggTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGAt                                                                           <  1:4141467/93‑1 (MQ=255)

              ggTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGAt                                                                           >  1:3658159/1‑93 (MQ=255)

                tGCAGTCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGACATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTc                                                                         <  2:2523934/93‑1 (MQ=255)

                tGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTc                                                                         >  2:1148663/1‑93 (MQ=255)

                tGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTc                                                                         >  2:2296238/1‑93 (MQ=255)

                 gCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAGCGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCg                                                                        <  1:1054764/93‑1 (MQ=255)

                 gCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCg                                                                        >  2:240502/1‑93 (MQ=255)

                 gCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCg                                                                        >  1:3734451/1‑93 (MQ=255)

                  cAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGt                                                                       <  1:2248317/93‑1 (MQ=255)

                   aGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGtt                                                                      >  1:3202706/1‑93 (MQ=255)

                    ggCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGttt                                                                     <  2:3752827/93‑1 (MQ=255)

                    ggCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGttt                                                                     <  1:4268045/93‑1 (MQ=255)

                    ggCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGttt                                                                     >  1:560717/1‑93 (MQ=255)

                        gTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGcc                                                                 >  2:3663680/1‑93 (MQ=255)

                          cGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCa                                                               <  2:3394744/93‑1 (MQ=255)

                           gATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAt                                                              >  2:10687/1‑93 (MQ=255)

                            aTACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtg                                                             >  1:917498/1‑93 (MQ=255)

                            aTACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtg                                                             >  1:763686/1‑93 (MQ=255)

                             tACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtgc                                                            <  2:2043067/93‑1 (MQ=255)

                              aCCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtgct                                                           >  2:153593/1‑93 (MQ=255)

                               ccATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtgctg                                                          >  2:4485002/1‑93 (MQ=255)

                               ccATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtgctg                                                          <  1:3989079/93‑1 (MQ=255)

                                cATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCAtgctgc                                                         >  1:1005384/1‑93 (MQ=255)

                                 aTTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGcc                                                        <  2:1252826/93‑1 (MQ=255)

                                 aTTGCTGCCGGAGATACCTTGAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGcc                                                        <  2:838393/93‑1 (MQ=255)

                                  ttGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCg                                                       >  2:4241409/1‑93 (MQ=255)

                                  ttGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCg                                                       >  2:1893530/1‑93 (MQ=255)

                                  ttGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCg                                                       >  2:3267103/1‑93 (MQ=255)

                                  ttGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCg                                                       >  2:2710489/1‑93 (MQ=255)

                                    gctgcCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCt                                                     >  2:3470088/1‑93 (MQ=255)

                                     ctgcCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTg                                                    >  1:1247000/1‑93 (MQ=255)

                                       gcCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCg                                                  >  1:628133/1‑93 (MQ=255)

                                          ggAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGAtt                                               >  2:2601303/1‑93 (MQ=255)

                                            agaTACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGc                                             <  2:4224796/93‑1 (MQ=255)

                                             gaTACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGcc                                            >  2:1607394/1‑93 (MQ=255)

                                             gaTACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGcc                                            >  1:1911124/1‑93 (MQ=255)

                                              aTACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCg                                           <  2:1475105/93‑1 (MQ=255)

                                              aTACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCg                                           >  2:2152379/1‑93 (MQ=255)

                                               tACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGt                                          >  1:1449418/1‑93 (MQ=255)

                                               tACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGt                                          >  2:3723066/1‑93 (MQ=255)

                                               tACCTTTAACGGTGCGTTAATCACAGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGt                                          >  2:3150510/1‑93 (MQ=255)

                                                 ccTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTaa                                        >  2:183042/1‑93 (MQ=255)

                                                  cTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAac                                       <  2:1390001/93‑1 (MQ=255)

                                                  cTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAac                                       >  2:264394/1‑93 (MQ=255)

                                                  cTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAac                                       <  1:4645034/93‑1 (MQ=255)

                                                   tttAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAaca                                      <  1:30708/93‑1 (MQ=255)

                                                   tttAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAaca                                      <  1:2477770/93‑1 (MQ=255)

                                                     tAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACg                                    <  2:1303648/93‑1 (MQ=255)

                                                       aCGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGGCCATGCTGCCGCTGCGATTGCCGTAACACGTa                                  >  2:1884421/1‑93 (MQ=255)

                                                       aCGGTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTa                                  <  2:3804320/93‑1 (MQ=255)

                                                         ggTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTaaa                                >  2:2499673/1‑93 (MQ=255)

                                                         ggTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTaaa                                <  2:333222/93‑1 (MQ=255)

                                                          gTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAg                               <  2:534609/93‑1 (MQ=255)

                                                          gTGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAg                               <  2:2932145/93‑1 (MQ=255)

                                                           tGCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAgg                              >  1:3931783/1‑93 (MQ=255)

                                                            gCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGgc                             <  1:1196174/93‑1 (MQ=255)

                                                            gCGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGgc                             <  1:3019274/93‑1 (MQ=255)

                                                             cGTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGgcg                            <  2:3979459/93‑1 (MQ=255)

                                                              gTTAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGgcgc                           >  1:2694800/1‑93 (MQ=255)

                                                               ttAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGca                          >  1:286735/1‑93 (MQ=255)

                                                               ttAATCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGca                          <  1:3795010/93‑1 (MQ=255)

                                                                  aTCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACaa                       >  2:913378/1‑93 (MQ=255)

                                                                  aTCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACaa                       >  1:3412427/1‑93 (MQ=255)

                                                                   tCACGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAAc                      >  1:2104682/1‑93 (MQ=255)

                                                                     aCGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCt                    >  2:4345585/1‑93 (MQ=255)

                                                                      cGGCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGTCGCACAACCtt                   <  2:671673/93‑1 (MQ=255)

                                                                        gCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTcc                 <  1:3836336/93‑1 (MQ=255)

                                                                        gCATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTcc                 >  1:1871036/1‑93 (MQ=255)

                                                                         cATTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCg                >  1:4421593/1‑93 (MQ=255)

                                                                          aTTGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGt               >  2:3528456/1‑93 (MQ=255)

                                                                           ttGCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTa              <  2:463879/93‑1 (MQ=255)

                                                                           ttGCTGAAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTa              <  1:2787566/93‑1 (MQ=255)

                                                                             gCTGGAAGAAAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTAcc            <  2:2247319/93‑1 (MQ=255)

                                                                                tgaagaaAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTg         <  1:1085201/92‑1 (MQ=255)

                                                                                  aagaaAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGc       >  2:1360581/1‑93 (MQ=255)

                                                                                   agaaAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCg      <  2:2072318/93‑1 (MQ=255)

                                                                                    gaaAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGt     >  1:4199457/1‑93 (MQ=255)

                                                                                    gaaAAATCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGt     >  1:3580037/1‑93 (MQ=255)

                                                                                       aaaTCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGaa  <  1:1998184/93‑1 (MQ=255)

                                                                                       aaaTCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGaa  <  2:1810705/93‑1 (MQ=255)

GTTCCTGGATTCCGGGTGCAGGCTGTCGATACCATTGCTGCCGGAGATACCTTTAACGGTGCGTTAATCACGGCATTGCTGGAAGAAAAACCATTGCCAGAGGCGATTCGTTTTGCCCATGCTGCCGCTGCGATTGCCGTAACACGTAAAGGCGCACAACCTTCCGTACCGTGGCGTGAA  >  NC_000913/3935637‑3935816

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`