BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,948,221	A→G	A13A (GCA→GCG)	ilvG →	acetolactate synthase II large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,948,221	0	A	G	100.0%	741.4 / NA	237	A13A (GCA→GCG)	ilvG	acetolactate synthase II large subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/123); total (114/123)

Only 100 of 248 total aligned reads displayed.

GAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948132‑3948310

gAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAg                                                                                        >  1:418902/1‑93 (MQ=255)

 aaTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAgg                                                                                       <  1:1227300/93‑1 (MQ=255)

 aaTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAgg                                                                                       <  1:2297920/93‑1 (MQ=255)

  aTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAggg                                                                                      >  1:3357309/1‑93 (MQ=255)

  aTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAggg                                                                                      >  1:662929/1‑93 (MQ=255)

   tAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgt                                                                                     >  2:289564/1‑93 (MQ=255)

    aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGTAACTAACTATGAATGGCGCACAGTGCGGGGTACATGCGATGCGGGCGCAgtgcg                                                                                    >  2:4673642/1‑89 (MQ=255)

    aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtg                                                                                    <  1:2880502/93‑1 (MQ=255)

      cAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGtgtg                                                                                  >  2:550964/1‑93 (MQ=255)

      cAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGtgtg                                                                                  <  2:1968640/93‑1 (MQ=255)

        gCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGaa                                                                                >  2:3749124/1‑93 (MQ=255)

           caAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAacac                                                                             >  2:3456073/1‑93 (MQ=255)

            aaaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACAcc                                                                            <  1:4254396/93‑1 (MQ=255)

            aaaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACAcc                                                                            >  2:3297394/1‑93 (MQ=255)

              aaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGt                                                                          <  1:245180/93‑1 (MQ=255)

               aTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtt                                                                         <  2:4372678/93‑1 (MQ=255)

                 tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtttt                                                                       <  2:117128/93‑1 (MQ=255)

                  cTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTc                                                                      >  1:1131242/1‑93 (MQ=255)

                   tGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCg                                                                     >  2:1842696/1‑93 (MQ=255)

                    gTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCgg                                                                    >  2:103523/1‑93 (MQ=255)

                     tttCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGt                                                                   <  2:3084337/93‑1 (MQ=255)

                       tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 <  2:1165778/93‑1 (MQ=255)

                       tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 >  1:3695163/1‑93 (MQ=255)

                       tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 <  1:3919366/93‑1 (MQ=255)

                       tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 <  1:155443/93‑1 (MQ=255)

                         tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               <  1:4388012/93‑1 (MQ=255)

                         tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               >  2:2964192/1‑93 (MQ=255)

                         tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               >  1:2179473/1‑93 (MQ=255)

                         tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGGTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               >  1:70736/1‑93 (MQ=255)

                           aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             <  2:2423826/93‑1 (MQ=255)

                             gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           >  1:1340194/1‑93 (MQ=255)

                             gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           >  2:3656852/1‑93 (MQ=255)

                              aTTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGt                                                          <  2:4541062/93‑1 (MQ=255)

                              aTTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGt                                                          <  2:2563053/93‑1 (MQ=255)

                               ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         <  2:1958702/93‑1 (MQ=255)

                               ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         >  1:544520/1‑93 (MQ=255)

                               ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         >  1:4066517/1‑93 (MQ=255)

                                tCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTgg                                                        <  1:1019706/93‑1 (MQ=255)

                                      cGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAAt                                                  <  2:1584246/93‑1 (MQ=255)

                                        gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:2472431/93‑1 (MQ=255)

                                        gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:1431016/93‑1 (MQ=255)

                                        gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  2:4089166/93‑1 (MQ=255)

                                        gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                >  2:2748361/1‑93 (MQ=255)

                                          gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              >  1:3167179/1‑93 (MQ=255)

                                          gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              <  1:3424285/93‑1 (MQ=255)

                                            actaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGcg                                            >  1:548553/1‑92 (MQ=255)

                                            actaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGcc                                            <  2:4153297/93‑1 (MQ=255)

                                             ctaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCg                                           >  1:3214880/1‑93 (MQ=255)

                                              taactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCgg                                          >  1:2389564/1‑93 (MQ=255)

                                              taactaTGAATGGCGCACAGTGGGTGGTACAGGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCgg                                          >  1:914540/1‑93 (MQ=255)

                                               aactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGt                                         <  1:1482131/93‑1 (MQ=255)

                                                actaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGtt                                        <  1:448318/93‑1 (MQ=255)

                                                 ctaTGAATGGCGCACAGGGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGgtt                                       >  2:1715301/1‑93 (MQ=255)

                                                  taTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTa                                      >  1:2201757/1‑93 (MQ=255)

                                                  taTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTa                                      <  2:3506915/93‑1 (MQ=255)

                                                   aTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTAc                                     <  2:2783848/93‑1 (MQ=255)

                                                   aTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTAc                                     <  1:2914274/93‑1 (MQ=255)

                                                    tGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACg                                    >  1:3685085/1‑93 (MQ=255)

                                                    tGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGCGGCGCAATTATGCCGGTTTACg                                    >  1:1828701/1‑93 (MQ=255)

                                                     gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   <  1:2714143/93‑1 (MQ=255)

                                                     gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   <  1:3815867/93‑1 (MQ=255)

                                                     gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   >  1:4579785/1‑93 (MQ=255)

                                                      aaTGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGAt                                  >  1:3574987/1‑93 (MQ=255)

                                                      aaTGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGAt                                  <  2:503786/93‑1 (MQ=255)

                                                       aTGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATg                                 <  1:1966493/93‑1 (MQ=255)

                                                         ggCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCa                               <  1:1720464/93‑1 (MQ=255)

                                                          gcgcACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCAt                              <  2:3374539/93‑1 (MQ=255)

                                                          gcgcACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCAt                              <  1:4121323/93‑1 (MQ=255)

                                                           cgcACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCAtt                             <  1:1388195/93‑1 (MQ=255)

                                                            gcACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTg                            <  1:2777225/93‑1 (MQ=255)

                                                             cacaGTGGGTGGTACATTCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGt                           >  1:3653236/1‑93 (MQ=255)

                                                             cacaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGt                           <  2:2144953/93‑1 (MQ=255)

                                                              acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  2:828855/93‑1 (MQ=255)

                                                              acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  2:1308847/93‑1 (MQ=255)

                                                               caGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAt                         <  2:2199832/93‑1 (MQ=255)

                                                               caGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAt                         <  2:695089/93‑1 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGTAATTATGCCGGTTTACGATGCATTGTATGa                       <  1:4130644/93‑1 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATgg                       >  2:3243703/1‑92 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGa                       <  2:1365485/93‑1 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGa                       <  2:743429/93‑1 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGa                       <  2:3770535/93‑1 (MQ=255)

                                                                 gtgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGCTTACGATGCATTGTATGa                       >  2:3693395/1‑93 (MQ=255)

                                                                  tgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAc                      <  2:3069991/93‑1 (MQ=255)

                                                                  cgggtggTACCTGCGTTGCGGGCCCAGGGGGCTCACACCGTTTTCGGATATCCGGGTGTTGCAATTATGCCGGTTTACGATTCTTTTTAtatc                      >  2:2478024/2‑90 (MQ=255)

                                                                    ggtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                    >  2:4273845/1‑93 (MQ=255)

                                                                     gtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggc                   >  1:872320/1‑93 (MQ=255)

                                                                      tggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggcg                  <  1:3202453/93‑1 (MQ=255)

                                                                        gtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACggcggc                <  2:2128325/93‑1 (MQ=255)

                                                                           cATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGTGCAATTATGCCGGTTTACGATGCATTGTATGACGGAGGCGTg             >  2:823172/1‑93 (MQ=255)

                                                                             tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           <  2:1614996/93‑1 (MQ=255)

                                                                             tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           <  1:4424224/93‑1 (MQ=255)

                                                                              gCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAg          >  2:392146/1‑93 (MQ=255)

                                                                              gCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCAGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAg          >  2:1790496/1‑93 (MQ=255)

                                                                                gTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCa        >  1:1057286/1‑93 (MQ=255)

                                                                                 ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       >  2:2277703/1‑93 (MQ=255)

                                                                                 ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       <  1:3021869/93‑1 (MQ=255)

                                                                                  tGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACt      <  1:2758955/93‑1 (MQ=255)

                                                                                     gggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGc   >  1:3757036/1‑93 (MQ=255)

                                                                                      ggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCt  >  2:3937970/1‑93 (MQ=255)

                                                                                      ggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCt  >  1:2040222/1‑93 (MQ=255)

GAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948132‑3948310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`