BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,957,165	C→T	V89V (GTG→GTA)	ppiC ←	peptidyl‑prolyl cis‑trans isomerase C

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,957,165	0	C	T	100.0%	799.7 / NA	230	V89V (GTG→GTA)	ppiC	peptidyl‑prolyl cis‑trans isomerase C
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (97/133); total (97/133)

Only 100 of 232 total aligned reads displayed.

TGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACT‑CAA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGG  >  NC_000913/3957078‑3957254

tGCCCTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTAc                                                                                         <  1:3936794/93‑1 (MQ=25)

cgCCCTCCCCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTAc                                                                                         <  1:1406140/92‑1 (MQ=25)

  cccTCACCCCGCCC‑‑CTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCt                                                                                       <  2:1689805/93‑1 (MQ=21)

  cccTCACCCCG‑‑ACCCTCTCCGACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCt                                                                                       <  2:2985590/93‑1 (MQ=25)

    cTCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTa                                                                                     <  2:4279387/93‑1 (MQ=25)

     tCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTaa                                                                                    <  1:3625814/93‑1 (MQ=25)

     tCACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTaa                                                                                    <  2:2362953/93‑1 (MQ=25)

      cACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAat                                                                                   <  1:1476726/93‑1 (MQ=25)

      cACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAat                                                                                   <  1:814439/93‑1 (MQ=25)

      cACCCCG‑‑ACCCTCTCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAat                                                                                   <  1:1326695/93‑1 (MQ=25)

              gaccctctCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGAtgtg                                                                             >  2:2887277/5‑93 (MQ=38)

               accctctCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGa                                                                            >  2:787722/4‑93 (MQ=38)

               accctctCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGa                                                                            <  1:3583705/90‑1 (MQ=38)

                 cctctCCCACAGGGAGAGGGAGAAAACACTCCAG‑GCGTTCGCCTGGAGGAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata                                                                          >  2:3088120/2‑93 (MQ=37)

                 cctctCCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGata                                                                          <  2:2284714/92‑1 (MQ=39)

                    ctcCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATcc                                                                       <  2:3582810/93‑1 (MQ=255)

                     tcCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCg                                                                      >  2:1540502/1‑93 (MQ=255)

                     tcCCACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCg                                                                      >  2:4092667/1‑93 (MQ=255)

                       ccACAGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGaa                                                                    >  1:3675466/1‑93 (MQ=255)

                        cacaGGGAGAGGGAGAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAAc                                                                   <  2:849761/93‑1 (MQ=255)

                           agggagagggagAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg                                                                <  2:2216831/93‑1 (MQ=255)

                           agggagagggagAAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTgg                                                                <  1:1081728/93‑1 (MQ=255)

                            gggagagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTggg                                                               >  1:3390595/1‑93 (MQ=255)

                            gggagagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTggg                                                               <  2:3241252/93‑1 (MQ=255)

                             ggagagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgt                                                              <  2:2956522/93‑1 (MQ=255)

                              gagagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtg                                                             <  2:562450/93‑1 (MQ=255)

                               agagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtgt                                                            <  2:1131661/93‑1 (MQ=255)

                               agagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtgt                                                            >  2:2090383/1‑93 (MQ=255)

                               agagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGgtgt                                                            >  1:4163294/1‑93 (MQ=255)

                                gagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGtgtg                                                           >  1:1026224/1‑93 (MQ=255)

                                gagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGtgtg                                                           >  2:905227/1‑93 (MQ=255)

                                gagggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGtgtg                                                           <  1:1810322/93‑1 (MQ=255)

                                 agggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGc                                                          <  1:4023189/93‑1 (MQ=255)

                                  gggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGGACCTTAATGATGTGATATCCGAACTGGGTGTGCa                                                         >  2:1998943/1‑93 (MQ=255)

                                   ggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAg                                                        <  1:4592480/93‑1 (MQ=255)

                                   ggagaAAACACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAg                                                        <  1:4563580/93‑1 (MQ=255)

                                      gaAACCACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGTAGCgg                                                     <  2:3615522/93‑1 (MQ=255)

                                        aaaCACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc                                                   <  2:4147799/93‑1 (MQ=255)

                                        aaaCACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc                                                   >  1:21929/1‑93 (MQ=255)

                                        aaaCACT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc                                                   >  1:2411811/1‑93 (MQ=255)

                                            acT‑CAAGGCCTTCTCCTTGAGAAGGCCTTGCTATTAGTTGCGGTACAGTCCCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt                                               <  1:3371484/93‑1 (MQ=255)

                                            acT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt                                               <  1:1437352/93‑1 (MQ=255)

                                            acT‑CAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt                                               <  2:3115469/93‑1 (MQ=255)

                                                caaggCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                            >  1:2035954/5‑93 (MQ=255)

                                                caaggCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                            >  1:1654326/5‑93 (MQ=255)

                                                    gCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTcc                                        <  2:3372912/93‑1 (MQ=255)

                                                      cTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAg                                      >  1:4248884/1‑93 (MQ=255)

                                                      cTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAg                                      <  1:390727/93‑1 (MQ=255)

                                                       ttCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGt                                     >  2:3129384/1‑93 (MQ=255)

                                                       ttCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGt                                     >  2:1527761/1‑93 (MQ=255)

                                                        tctcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTa                                    <  2:4404995/93‑1 (MQ=255)

                                                         ctcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAc                                   <  1:4472283/93‑1 (MQ=255)

                                                         ctcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAc                                   <  2:2702506/93‑1 (MQ=255)

                                                          tcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAcc                                  >  2:3162280/1‑93 (MQ=255)

                                                             tGGAGAATGCTTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGa                               <  1:3295114/93‑1 (MQ=255)

                                                             tGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGa                               >  1:997174/1‑93 (MQ=255)

                                                             tGGAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGa                               <  2:3484048/93‑1 (MQ=255)

                                                              ggAGAAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGAc                              <  2:187962/93‑1 (MQ=255)

                                                               gagaAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACa                             >  2:1256349/1‑93 (MQ=255)

                                                               gagaAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACa                             >  1:2264023/1‑93 (MQ=255)

                                                                agaAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACaa                            <  2:2688873/93‑1 (MQ=255)

                                                                agaAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACaa                            <  1:775854/93‑1 (MQ=255)

                                                                 gaAGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAag                           <  2:733634/93‑1 (MQ=255)

                                                                  aaGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAaga                          <  2:4500881/93‑1 (MQ=255)

                                                                   aGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAagag                         >  1:269308/1‑93 (MQ=255)

                                                                   aGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAagag                         >  1:2596677/1‑93 (MQ=255)

                                                                   aGGCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAagag                         <  1:3353918/93‑1 (MQ=255)

                                                                    ggCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAgaga                        >  1:4037559/1‑93 (MQ=255)

                                                                     gCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                       <  2:3992957/93‑1 (MQ=255)

                                                                     gCCTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                       >  1:3105376/1‑93 (MQ=255)

                                                                      ccTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaa                      >  2:2578932/1‑93 (MQ=255)

                                                                      ccTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaa                      <  1:3725592/93‑1 (MQ=255)

                                                                       cTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa                     >  1:1770364/1‑93 (MQ=255)

                                                                       cTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa                     <  2:3853034/93‑1 (MQ=255)

                                                                       cTTGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa                     <  2:133512/93‑1 (MQ=255)

                                                                        ttGCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAAc                    >  1:2323709/1‑93 (MQ=255)

                                                                          gCTATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCa                  <  2:63130/93‑1 (MQ=255)

                                                                            tATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt                >  2:1950765/1‑93 (MQ=255)

                                                                            tATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt                >  1:4649251/1‑93 (MQ=255)

                                                                            tATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt                >  1:2983349/1‑93 (MQ=255)

                                                                            tATTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACt                <  1:2170607/93‑1 (MQ=255)

                                                                             aTTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACtt               >  1:3235856/1‑93 (MQ=255)

                                                                             aTTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACtt               >  2:482365/1‑93 (MQ=255)

                                                                             aTTAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGG‑CGGTCCGGTTCCGTAACCGGCAAGAGAAAACCACttt              >  2:119644/1‑93 (MQ=255)

                                                                              ttAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACttt              <  2:334424/93‑1 (MQ=255)

                                                                              ttAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACttt              >  1:340787/1‑93 (MQ=255)

                                                                              ttAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGCCTCCAGTACCGGACAAGAGAAAACCACttt              >  1:737955/1‑93 (MQ=255)

                                                                               tAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTa             <  2:2181587/93‑1 (MQ=255)

                                                                               tAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTa             <  1:60358/93‑1 (MQ=255)

                                                                               tAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTa             <  1:564163/93‑1 (MQ=255)

                                                                               tAGTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGAGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTa             <  1:3305661/93‑1 (MQ=255)

                                                                                 gTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc           >  1:1983428/1‑93 (MQ=255)

                                                                                 gTTGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATc           <  1:2755365/93‑1 (MQ=255)

                                                                                  ttGCGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCg          >  2:4561075/1‑93 (MQ=255)

                                                                                     cGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAAc       <  1:1543247/93‑1 (MQ=255)

                                                                                     cGGTACAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAAc       <  1:1189062/93‑1 (MQ=255)

                                                                                      ggTACAGTACCTTAATGATGTGATATCCCAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACg      >  1:2461930/1‑93 (MQ=255)

                                                                                         aCAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCg   <  1:2939032/93‑1 (MQ=255)

                                                                                         aCAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCg   >  1:4338831/1‑93 (MQ=255)

                                                                                          cAGTACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCgg  <  2:2157/93‑1 (MQ=255)

TGCCCTCACCCCG‑‑A‑‑CTCTCCCACAGGGAGAGGGAGAAAACACT‑CAA‑GCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGG  >  NC_000913/3957078‑3957254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`