BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,964,041	A→G	T4A (ACC→GCC)	rho →	transcription termination factor Rho

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,964,041	0	A	G	100.0%	771.6 / NA	242	T4A (ACC→GCC)	rho	transcription termination factor Rho
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (112/130); total (112/130)

Only 100 of 246 total aligned reads displayed.

TAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC  >  NC_000913/3963951‑3964130

   aCAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGaa                                                                                      <  2:1719989/93‑1 (MQ=255)

   aCAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGaa                                                                                      <  2:4432254/93‑1 (MQ=255)

     aGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAAtt                                                                                    <  1:3689990/93‑1 (MQ=255)

       gCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTaa                                                                                  <  1:1962798/93‑1 (MQ=255)

        cATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTaaa                                                                                 <  2:1598233/93‑1 (MQ=255)

        cATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTaaa                                                                                 <  2:780749/93‑1 (MQ=255)

        cATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTaaa                                                                                 <  1:4548290/93‑1 (MQ=255)

          tGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               >  1:3582315/1‑93 (MQ=255)

          tGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               <  1:4047701/93‑1 (MQ=255)

          tGGATAATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGa                                                                               <  2:349915/93‑1 (MQ=255)

            gatgttCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGACCTCACACCACTATGAATCTTGCCGAATTAAAGAAt                                                                             <  1:3968324/93‑1 (MQ=255)

             atgatCCTGCAATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAAtt                                                                            <  2:3874772/93‑2 (MQ=255)

             atgacCCTGCGATCCCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATa                                                                            <  2:875498/93‑1 (MQ=255)

              tgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATAc                                                                           >  1:536675/1‑93 (MQ=255)

               gatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACg                                                                          >  1:2706250/1‑93 (MQ=255)

               gatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACg                                                                          >  1:685045/1‑93 (MQ=255)

                acccTCCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGc                                                                         <  2:2526828/91‑1 (MQ=255)

                  ccTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCg                                                                       <  2:3460297/93‑1 (MQ=255)

                   cTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCgg                                                                      <  2:2087586/93‑1 (MQ=255)

                   cTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCgg                                                                      >  1:1555260/1‑93 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  <  1:2710292/93‑1 (MQ=255)

                       cATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTc                                                                  <  1:2120117/93‑1 (MQ=255)

                        aTACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCt                                                                 >  2:1523493/1‑93 (MQ=255)

                        aTACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCt                                                                 >  1:2070007/1‑93 (MQ=255)

                         tACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTg                                                                <  1:3379670/93‑1 (MQ=255)

                         tACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTg                                                                <  2:1137574/93‑1 (MQ=255)

                           ccATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAg                                                              >  2:4080141/1‑93 (MQ=255)

                            cATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGc                                                             >  1:2157624/1‑93 (MQ=255)

                            cATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGc                                                             <  2:475519/93‑1 (MQ=255)

                             aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCt                                                            >  1:100924/1‑93 (MQ=255)

                             aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCt                                                            >  2:342789/1‑93 (MQ=255)

                             aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCt                                                            >  1:432031/1‑93 (MQ=255)

                               tCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGa                                                          <  2:540186/93‑1 (MQ=255)

                               tCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGa                                                          >  2:2917347/1‑93 (MQ=255)

                                cacaACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATCCGCCGGTTTCTGAGCTGAt                                                         <  2:4526044/93‑1 (MQ=255)

                                 acaacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATc                                                        <  1:3710812/93‑1 (MQ=255)

                                 acaacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATc                                                        <  2:3673481/93‑1 (MQ=255)

                                 acaacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATc                                                        >  2:65977/1‑93 (MQ=255)

                                 acaacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATc                                                        <  1:3489878/93‑1 (MQ=255)

                                   aacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCAc                                                      <  1:2474694/93‑1 (MQ=255)

                                     caTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCActc                                                    <  2:1444773/93‑1 (MQ=255)

                                      aTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCActct                                                   <  1:3838986/93‑1 (MQ=255)

                                      aTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCActct                                                   <  2:682543/93‑1 (MQ=255)

                                      aTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGATGATCActct                                                   >  2:182565/1‑93 (MQ=255)

                                       ttAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACtctc                                                  >  1:834713/1‑93 (MQ=255)

                                         aaGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCgg                                                >  2:4506684/1‑93 (MQ=255)

                                         aaGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCgg                                                <  1:2578883/93‑1 (MQ=255)

                                              cGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGaaa                                           <  2:2709830/93‑1 (MQ=255)

                                                 gaTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAata                                        >  2:2245255/1‑93 (MQ=255)

                                                  aTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAatat                                       <  1:917001/93‑1 (MQ=255)

                                                   tttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATg                                      >  2:3844284/1‑93 (MQ=255)

                                                   tttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATg                                      >  1:3201645/1‑93 (MQ=255)

                                                    ttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATgg                                     >  1:1295636/1‑93 (MQ=255)

                                                    ttACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATgg                                     <  1:4282189/93‑1 (MQ=255)

                                                     tACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATggg                                    <  1:1203226/93‑1 (MQ=255)

                                                     tACCCCAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATggg                                    <  2:4303141/93‑1 (MQ=255)

                                                     tACCCCAAGTTTAAGAAATCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATggg                                    <  1:1403474/93‑1 (MQ=255)

                                                       ccccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGc                                  >  2:3444088/1‑93 (MQ=255)

                                                       ccccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGc                                  >  2:3162561/1‑93 (MQ=255)

                                                        cccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCt                                 >  1:393556/1‑93 (MQ=255)

                                                        cccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCt                                 >  2:936483/1‑93 (MQ=255)

                                                        cccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCt                                 >  1:1520133/1‑93 (MQ=255)

                                                         ccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTg                                <  1:3280007/93‑1 (MQ=255)

                                                         ccAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTg                                >  2:593996/1‑93 (MQ=255)

                                                          cAAGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTgg                               <  1:511741/93‑1 (MQ=255)

                                                           aaGTATAAGAAATCACACCCATGTGAAGCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCCCGCTCGGCGAAAATATGGGGCTGGa                              <  2:3080606/93‑1 (MQ=255)

                                                            aGTTTAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGaa                             >  1:1793142/1‑93 (MQ=255)

                                                              tttAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGaaaa                           >  2:2309384/1‑93 (MQ=255)

                                                               ttAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAc                          <  1:1787991/93‑1 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAATcc                         <  2:2570238/93‑1 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAcc                         <  2:1027088/93‑1 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAcc                         <  1:24242/93‑1 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAcc                         >  2:135171/1‑93 (MQ=255)

                                                                tAAGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAAcc                         >  1:4177171/1‑93 (MQ=255)

                                                                 aaGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCt                        >  2:1959626/1‑93 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       >  1:1883017/1‑93 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       >  1:3046671/1‑93 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  2:3662320/93‑1 (MQ=255)

                                                                  aGAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTg                       <  1:4452124/93‑1 (MQ=255)

                                                                   gAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTgg                      >  2:2162954/1‑93 (MQ=255)

                                                                   gAACTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTgg                      >  2:1321478/1‑93 (MQ=255)

                                                                    aaCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGc                     >  1:2329943/1‑93 (MQ=255)

                                                                    aaCTCACACCACTATGAATCTTGCCGAATTAAAGAAGACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGc                     <  1:3580149/93‑1 (MQ=255)

                                                                     aCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCt                    <  1:1043667/93‑1 (MQ=255)

                                                                     aCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCt                    >  1:4582436/1‑93 (MQ=255)

                                                                     aCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCt                    <  1:2228010/93‑1 (MQ=255)

                                                                     aCTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCt                    <  1:2113293/93‑1 (MQ=255)

                                                                      cTCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTc                   >  2:1424953/1‑93 (MQ=255)

                                                                       tCACACCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCg                  <  1:1375014/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  2:323580/93‑1 (MQ=255)

                                                                         acacCACTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTa                <  2:974878/93‑1 (MQ=255)

                                                                           accacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATg              >  1:1091245/1‑93 (MQ=255)

                                                                            ccacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATga             <  1:3324123/93‑2 (MQ=255)

                                                                            ccacTATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGc             >  1:4624396/1‑93 (MQ=255)

                                                                                tATGAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTaa         <  1:2753189/93‑1 (MQ=255)

                                                                                   gAATCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCa      >  1:1406919/1‑93 (MQ=255)

                                                                                    aaTCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAg     <  2:1890446/93‑1 (MQ=255)

                                                                                    aaTCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAg     >  2:1785178/1‑93 (MQ=255)

                                                                                    aaTCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAg     <  1:1193095/93‑1 (MQ=255)

                                                                                     aTCTTGCCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAgg    >  2:559921/1‑93 (MQ=255)

TAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGAC  >  NC_000913/3963951‑3964130

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`