Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,991,607 G→A D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY ←
b3808 →
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,991,6070GA100.0% 841.0 / NA 232D22D (GAC→GAT
V49I (GTC→ATC) 
cyaY
b3808
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (106/126);  total (106/126)

Only 100 of 242 total aligned reads displayed.

GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696
                                                                                          |                                                                                         
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         <  1:2885126/93‑1 (MQ=255)
gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                                                                                         >  1:2249849/1‑93 (MQ=255)
 ttGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATcc                                                                                        <  2:1488558/93‑1 (MQ=255)
  tGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCa                                                                                       <  1:4221746/93‑1 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      >  2:396518/1‑93 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      >  2:1009165/1‑93 (MQ=255)
   gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                                                                                      <  2:1875354/93‑1 (MQ=255)
     tAATGATTTTTCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGc                                                                                    <  2:761806/93‑1 (MQ=255)
     tAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGc                                                                                    >  1:1839739/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   <  2:2640239/93‑1 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   >  1:4320414/1‑93 (MQ=255)
      aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg                                                                                   <  1:48146/93‑1 (MQ=255)
       ataaTTTTGCTGCCTCTCTCAAATGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGt                                                                                  <  1:2423381/90‑1 (MQ=255)
        tGATTTTGCTGCCCGTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt                                                                                 <  1:3198054/93‑1 (MQ=255)
        tGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt                                                                                 >  2:2192506/1‑93 (MQ=255)
        tGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt                                                                                 >  2:3065500/1‑93 (MQ=255)
         gATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttc                                                                                <  1:4613747/93‑1 (MQ=255)
         gATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttc                                                                                <  2:1930104/93‑1 (MQ=255)
         gATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttc                                                                                >  1:4015044/1‑93 (MQ=255)
         gATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttc                                                                                <  2:4257420/93‑1 (MQ=255)
          aTTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttct                                                                               <  1:3133482/93‑1 (MQ=255)
           ttttGCTGCCACTCTCAAAGGGAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCACGCGttcct                                                                              >  2:4087310/1‑91 (MQ=255)
             ttGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCa                                                                            >  1:907098/1‑93 (MQ=255)
               gctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAAt                                                                          <  1:411689/93‑1 (MQ=255)
                 tgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATgg                                                                        >  2:3519651/1‑93 (MQ=255)
                 tgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATgg                                                                        <  1:2187535/93‑1 (MQ=255)
                     actctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAg                                                                    >  1:3364495/3‑93 (MQ=255)
                      ctctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGc                                                                   >  1:1339605/2‑93 (MQ=255)
                        ctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCa                                                                 <  1:3745314/93‑1 (MQ=255)
                        ctcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCa                                                                 >  2:1748059/1‑93 (MQ=255)
                         tcAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCag                                                                >  2:2596693/1‑93 (MQ=255)
                          cAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCaga                                                               <  1:2946628/93‑1 (MQ=255)
                           aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCagag                                                              >  1:1712109/1‑93 (MQ=255)
                           aaaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCagag                                                              <  1:150511/93‑1 (MQ=255)
                            aaGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGt                                                             <  1:1572005/93‑1 (MQ=255)
                             aGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGtt                                                            <  1:2537570/93‑1 (MQ=255)
                                tAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGAt                                                         <  1:362528/93‑1 (MQ=255)
                                 aaTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATc                                                        <  2:3915238/93‑1 (MQ=255)
                                  aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                       <  1:2118119/93‑1 (MQ=255)
                                  aTGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCa                                                       >  1:4291189/1‑93 (MQ=255)
                                     gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                    >  1:1028188/1‑93 (MQ=255)
                                     gTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGcc                                                    <  2:943752/93‑1 (MQ=255)
                                      tCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCa                                                   <  1:192286/93‑1 (MQ=255)
                                       cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                  <  1:4554504/93‑1 (MQ=255)
                                       cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                  <  2:2914622/93‑1 (MQ=255)
                                       cAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAg                                                  <  2:3447736/93‑1 (MQ=255)
                                        aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAgg                                                 >  2:4347528/1‑93 (MQ=255)
                                        aGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTAAATGGTCAGCCAGAGTTGATCAGCCAgg                                                 >  2:3769210/1‑93 (MQ=255)
                                         gTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGc                                                >  1:2825011/1‑93 (MQ=255)
                                          tACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCg                                               >  2:581611/1‑93 (MQ=255)
                                            cgccgcCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTTTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGAt                                             <  2:1166268/93‑1 (MQ=255)
                                              ccgccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGa                                           >  1:855259/1‑93 (MQ=255)
                                               cgccgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGaa                                          >  2:1303731/1‑93 (MQ=255)
                                                  cgTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtt                                       >  2:503240/1‑93 (MQ=255)
                                                   gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAAtta                                      >  2:1916573/1‑92 (MQ=255)
                                                   gTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                      <  2:3086626/93‑1 (MQ=255)
                                                   cttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCAGCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTc                                      <  1:3478708/92‑1 (MQ=255)
                                                    ttGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCa                                     >  1:4526479/1‑93 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  2:4484571/93‑1 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  2:1395560/93‑1 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  1:673811/93‑1 (MQ=255)
                                                     tGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCAc                                    <  1:4349766/93‑1 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   <  1:2234114/93‑1 (MQ=255)
                                                      gATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACt                                   >  2:269959/1‑93 (MQ=255)
                                                       aTTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTg                                  >  2:4031149/1‑93 (MQ=255)
                                                         ttCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTc                                <  2:4175977/93‑1 (MQ=255)
                                                          tCGCAGTCGATATCGCTGTTGCCATCCCAGTCATCCAGGCGTTTTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGACGAAATTCACTGTCg                               >  2:4679225/1‑93 (MQ=255)
                                                            gCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGtt                             >  2:4124646/1‑93 (MQ=255)
                                                             cAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTc                            >  1:53071/1‑93 (MQ=255)
                                                              aGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCa                           >  2:717648/1‑93 (MQ=255)
                                                               gTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAt                          <  1:780932/93‑1 (MQ=255)
                                                                 cGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttg                        <  2:4589592/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  1:3282232/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       <  1:2164766/93‑1 (MQ=255)
                                                                  gATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgt                       >  2:3726541/1‑93 (MQ=255)
                                                                   atatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgtt                      >  2:2526309/1‑93 (MQ=255)
                                                                    tatCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCAttgttg                     >  1:4604071/1‑93 (MQ=255)
                                                                     atCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                    <  1:272816/93‑1 (MQ=255)
                                                                     atCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATtgttgt                    <  1:1194801/93‑1 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   <  2:3466242/93‑1 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   >  1:2475494/1‑93 (MQ=255)
                                                                      tCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTa                   <  2:2850867/93‑1 (MQ=255)
                                                                        gCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATc                 <  1:1263642/93‑1 (MQ=255)
                                                                        gCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATc                 <  1:2596278/93‑1 (MQ=255)
                                                                         cTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATct                >  1:2395366/1‑92 (MQ=255)
                                                                          tGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCt               >  2:2109071/1‑93 (MQ=255)
                                                                           gTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg              <  2:88088/93‑1 (MQ=255)
                                                                           gTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg              <  1:1125121/93‑1 (MQ=255)
                                                                           gTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg              >  1:635988/1‑93 (MQ=255)
                                                                           gTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTg              <  2:2274281/93‑1 (MQ=255)
                                                                              gCCATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGttt           <  2:4207855/93‑1 (MQ=255)
                                                                               ccATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtttt          <  2:4418090/93‑1 (MQ=255)
                                                                               ccATCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGtttt          >  2:2432249/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        >  1:2757699/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        >  1:379888/1‑93 (MQ=255)
                                                                                 aTCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTa        <  1:4639528/93‑1 (MQ=255)
                                                                                  tCCCAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTaa       >  1:340672/1‑93 (MQ=255)
                                                                                    ccAGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGt     <  2:3685698/93‑1 (MQ=255)
                                                                                      aGTCATCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGa   >  1:4272285/1‑93 (MQ=255)
                                                                                       gtcatcCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAt  <  2:3767398/93‑1 (MQ=255)
                                                                                          |                                                                                         
GTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTCAGCCAGAGTTGATCAGCCAGGCGATGAAATTCACTGTCGTTCATTGTTGTATCCTGTTTTTAAGTGAT  >  NC_000913/3991517‑3991696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: