BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,006,407	C→T	G19E (GGA→GAA)	yigK ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,006,407	0	C	T	100.0%	702.4 / NA	195	G19E (GGA→GAA)	yigK	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (99/96); total (99/96)

Only 100 of 203 total aligned reads displayed.

AAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCA  >  NC_000913/4006318‑4006495

aaaCTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCa                                                                                        >  1:1452954/1‑93 (MQ=255)

 aaCTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAg                                                                                       >  1:1220745/1‑93 (MQ=255)

      cgcgcgGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCaaa                                                                                  <  1:1753237/93‑1 (MQ=255)

      cgcgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCaaa                                                                                  <  1:4054781/93‑1 (MQ=255)

        ctgtGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATc                                                                                <  2:2111218/90‑1 (MQ=255)

        cgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGGTTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTACAGCCAAATc                                                                                >  2:4045308/1‑93 (MQ=255)

        cgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATc                                                                                <  1:2742874/93‑1 (MQ=255)

        cgcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATc                                                                                >  2:2491506/1‑93 (MQ=255)

         gcTGGAACAAATGTCGACGTGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCa                                                                               >  2:4526238/1‑93 (MQ=255)

         gcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCa                                                                               >  2:394480/1‑93 (MQ=255)

         gcTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCa                                                                               >  2:3067698/1‑93 (MQ=255)

          cTGGAACAAATGTCGACGCGATTGAGTAGATGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCaa                                                                              >  1:3689929/1‑93 (MQ=255)

          cTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCaa                                                                              >  1:2354270/1‑93 (MQ=255)

           tGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAg                                                                             <  1:2929331/93‑1 (MQ=255)

           tGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAg                                                                             <  1:1346905/93‑1 (MQ=255)

           tGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAg                                                                             <  2:2663640/93‑1 (MQ=255)

            ggAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCATCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGt                                                                            <  1:3385768/93‑1 (MQ=255)

            ggAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGt                                                                            <  1:4460064/93‑1 (MQ=255)

             gAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCACATCAAGTa                                                                           >  2:1682171/1‑93 (MQ=255)

             gAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTa                                                                           <  1:859638/93‑1 (MQ=255)

              aaCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTaa                                                                          <  2:2206975/93‑1 (MQ=255)

               aCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAg                                                                         >  2:3439914/1‑93 (MQ=255)

               aCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAg                                                                         <  2:1641143/93‑1 (MQ=255)

               aCAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAg                                                                         >  2:3568381/1‑93 (MQ=255)

                cAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGc                                                                        <  1:1425950/93‑1 (MQ=255)

                 aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       >  2:1613837/1‑93 (MQ=255)

                 aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       >  1:659269/1‑93 (MQ=255)

                 aaaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACCGCTGGATTTCCAGCCAAATCAAGTAAGcc                                                                       >  1:2514922/1‑93 (MQ=255)

                  aaTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcg                                                                      >  2:1021613/1‑93 (MQ=255)

                   aTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgg                                                                     >  2:2720284/1‑92 (MQ=255)

                   aTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgc                                                                     >  1:3545528/1‑93 (MQ=255)

                   aTGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgc                                                                     <  1:726340/93‑1 (MQ=255)

                    tGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCcgcg                                                                    >  2:3728625/1‑93 (MQ=255)

                     gTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCgcgc                                                                   <  1:2826118/93‑1 (MQ=255)

                      tCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGcc                                                                  <  2:2249402/93‑1 (MQ=255)

                       cGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCt                                                                 >  1:4068049/1‑93 (MQ=255)

                         aCGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGc                                                               >  1:925481/1‑93 (MQ=255)

                         aCGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGc                                                               >  1:510549/1‑93 (MQ=255)

                         aCGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGc                                                               >  1:3506013/1‑93 (MQ=255)

                           gcgATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGccc                                                             <  1:1897060/93‑1 (MQ=255)

                           gcgATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGccc                                                             <  1:2077146/93‑1 (MQ=255)

                           gcgATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGccc                                                             >  2:1697282/1‑93 (MQ=255)

                              aTTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcact                                                          >  2:228637/1‑93 (MQ=255)

                              aTTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcact                                                          >  1:3777027/1‑93 (MQ=255)

                              aTTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcact                                                          <  2:144332/93‑1 (MQ=255)

                              aTTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGACACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcact                                                          >  2:3780890/1‑93 (MQ=255)

                               ttGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcactt                                                         >  2:3185058/1‑93 (MQ=255)

                                tGAGTAGAGGCCAGCGATTTAAGGTCATTTGCACCAGCGGCGCGCCTCTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttc                                                        <  2:2061387/93‑1 (MQ=255)

                                  aGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaa                                                      <  2:4228575/93‑1 (MQ=255)

                                  aGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaa                                                      <  2:1852893/93‑1 (MQ=255)

                                   gTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaac                                                     >  1:1099552/1‑93 (MQ=255)

                                    tAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCcacttcaaca                                                    >  2:4490742/1‑93 (MQ=255)

                                           cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             >  1:1658485/1‑93 (MQ=255)

                                           cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  1:4132564/93‑1 (MQ=255)

                                           cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  1:593901/93‑1 (MQ=255)

                                           cAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCaaa                                             <  2:1813197/93‑1 (MQ=255)

                                            aGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAc                                            >  2:1136379/1‑93 (MQ=255)

                                            aGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAAc                                            <  2:1660651/93‑1 (MQ=255)

                                               gATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCa                                         >  2:401752/1‑93 (MQ=255)

                                               gATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCa                                         >  2:138357/1‑93 (MQ=255)

                                                aTTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCaa                                        <  1:872441/93‑1 (MQ=255)

                                                 tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       <  1:1557795/93‑1 (MQ=255)

                                                 tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       <  1:2160591/93‑1 (MQ=255)

                                                 tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       <  1:3032818/93‑1 (MQ=255)

                                                 tttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAAt                                       >  1:3201618/1‑93 (MQ=255)

                                                  ttAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGGTTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATc                                      >  1:2784501/1‑93 (MQ=255)

                                                    aaGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCAc                                    <  2:2549311/93‑1 (MQ=255)

                                                     aGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACt                                   >  2:478354/1‑93 (MQ=255)

                                                     aGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACt                                   <  2:2583686/93‑1 (MQ=255)

                                                       gTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGa                                 >  2:4581375/1‑93 (MQ=255)

                                                       gTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGa                                 <  2:382607/93‑1 (MQ=255)

                                                       gTCAATTGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGa                                 <  2:2781202/93‑1 (MQ=255)

                                                            ttGCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCggg                            >  2:612604/1‑93 (MQ=255)

                                                              gCACCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaa                          >  2:2647808/1‑93 (MQ=255)

                                                                aCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaaaa                        >  1:2497146/1‑93 (MQ=255)

                                                                aCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaaaa                        >  1:963268/1‑93 (MQ=255)

                                                                aCCAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGaaaa                        >  2:3014479/1‑93 (MQ=255)

                                                                 ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAt                       <  2:1262478/93‑1 (MQ=255)

                                                                 ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAt                       >  2:1086487/1‑93 (MQ=255)

                                                                 ccAGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAAt                       >  2:455010/1‑93 (MQ=255)

                                                                   aGCGGCGCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAg                     <  1:4624888/93‑1 (MQ=255)

                                                                    gcggcgCGCCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGGAAATAGc                    >  1:1783699/1‑93 (MQ=255)

                                                                         gcgcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccc              >  1:359914/1‑93 (MQ=255)

                                                                           gcCACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑cccca            <  2:2726216/93‑3 (MQ=255)

                                                                            ccACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccccaa           >  2:4515322/1‑90 (MQ=255)

                                                                             cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccccaac          >  2:602966/1‑89 (MQ=255)

                                                                             cACTGCTGGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑ccccaac          >  1:4303029/1‑89 (MQ=255)

                                                                               ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCAaccc        >  1:3281494/1‑93 (MQ=255)

                                                                               ctgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCCAaccc        <  1:3830707/93‑1 (MQ=255)

                                                                                tgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAcccc        <  1:2610419/93‑1 (MQ=255)

                                                                                tgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAcccc        >  1:3123142/1‑93 (MQ=255)

                                                                                tgctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAAcccc        >  1:596618/1‑93 (MQ=255)

                                                                                 gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCa       >  1:2420808/1‑93 (MQ=255)

                                                                                 gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCa       <  1:932464/93‑1 (MQ=255)

                                                                                 gctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCa       >  1:4232544/1‑93 (MQ=255)

                                                                                  ctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAc      >  1:1849921/1‑93 (MQ=255)

                                                                                  ctgGATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCAc      >  1:4398980/1‑93 (MQ=255)

                                                                                    ggATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGc    >  2:3367005/1‑93 (MQ=255)

                                                                                    ggATTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGc    <  1:2209185/93‑1 (MQ=255)

                                                                                      aTTTCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGTCCCCAACCCCACGCCa  <  1:4172719/93‑1 (MQ=255)

AAACTGCGCGCTGGAACAAATGTCGACGCGATTGAGTAGAGGCCAGCGATTTAAGGTCAATTGCACCAGCGGCGCGCCACTGCTGGATTCCCAGCCAAATCAAGTAAGCCGCGCCTGCCCACTTCAACACTTCAAACGCAATCACTGAGCGGGAAAATAGCGT‑CCCAACCCCACGCCA  >  NC_000913/4006318‑4006495

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`