BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,060,112	A→G	Y96C (TAT→TGT)	yihN →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,060,112	0	A	G	100.0%	709.9 / NA	229	Y96C (TAT→TGT)	yihN	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/119); total (110/119)

Only 100 of 243 total aligned reads displayed.

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

 tGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTg                                                                                        <  2:2789061/93‑1 (MQ=255)

 tGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTg                                                                                        >  1:653813/1‑93 (MQ=255)

  gCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgg                                                                                       <  2:589542/93‑1 (MQ=255)

   ccGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTggg                                                                                      <  2:2998223/93‑1 (MQ=255)

   ccGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTggg                                                                                      <  2:3227632/93‑1 (MQ=255)

   ccGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTggg                                                                                      <  1:2601206/93‑1 (MQ=255)

    cGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgggg                                                                                     <  1:1317480/93‑1 (MQ=255)

    cGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgggg                                                                                     >  2:212511/1‑93 (MQ=255)

    cGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgggg                                                                                     >  2:4329623/1‑93 (MQ=255)

    cGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTgggg                                                                                     >  1:2185359/1‑93 (MQ=255)

     gATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGc                                                                                    >  2:3895046/1‑93 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCa                                                                                   <  1:2959436/93‑1 (MQ=255)

      aTAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGGGTTGGGGCa                                                                                   >  2:1003266/1‑93 (MQ=255)

        aaaCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATc                                                                                 >  2:3425418/1‑93 (MQ=255)

          aCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCct                                                                               >  1:2588336/1‑93 (MQ=255)

          aCTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGCTTATTTGACGACAATGCCGGGGCGTTGGGGCATCct                                                                               >  1:4614907/1‑93 (MQ=255)

            tACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCctct                                                                             <  2:3725510/93‑1 (MQ=255)

             aCCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCtt                                                                            >  1:986950/1‑93 (MQ=255)

               cgcgCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTg                                                                          <  1:4513416/93‑1 (MQ=255)

                 cgcAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTc                                                                        >  2:527017/1‑93 (MQ=255)

                 cgcAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTc                                                                        <  1:2837862/93‑1 (MQ=255)

                  gcAGATACACCATGTCATTCTCACACATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCt                                                                       <  2:4682024/93‑1 (MQ=255)

                   cAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTg                                                                      <  1:1189400/93‑1 (MQ=255)

                    aGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTgg                                                                     >  2:1287156/1‑93 (MQ=255)

                    aGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTgg                                                                     >  2:3381521/1‑93 (MQ=255)

                    aGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTgg                                                                     <  1:2269278/93‑1 (MQ=255)

                     gATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTggg                                                                    >  1:4190453/1‑93 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   <  2:2015675/93‑1 (MQ=255)

                      aTACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgc                                                                   <  1:563720/93‑1 (MQ=255)

                       tACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGgcg                                                                  >  1:2071951/1‑93 (MQ=255)

                        acacCATGTCATTCTCACTCATTGCGACAGGATTACTGGGGGTTTATTTGACGACAATGCCGGGGTGTTGGGGGATCCTCTTTGTCTGGgcgc                                                                 >  1:1276222/1‑93 (MQ=255)

                         cacCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCt                                                                >  1:836579/1‑93 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTa                                                               >  1:1481964/1‑93 (MQ=255)

                          acCATGTCATTCTCACTCATTGCGACAGGATTACTAGGAGTTTATTTGACGACAACGCCGGGGTGTTGGGGCATCATCTTTGGCTGGGCGCTa                                                               >  2:3272153/1‑93 (MQ=255)

                           ccATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAt                                                              <  1:4340766/93‑1 (MQ=255)

                             aTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAttt                                                            <  2:2048033/93‑1 (MQ=255)

                             aTGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTAttt                                                            <  1:4043928/93‑1 (MQ=255)

                              tGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTg                                                           <  2:3766347/93‑1 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         <  2:4523964/93‑1 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         >  2:776036/1‑93 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         >  2:2916204/1‑93 (MQ=255)

                                tCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGAAGACAATGCCGGGGCGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGc                                                         >  2:835676/1‑93 (MQ=255)

                                 cATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCg                                                        >  1:3710823/1‑93 (MQ=255)

                                 cATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCg                                                        >  2:3700482/1‑93 (MQ=255)

                                 cATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCg                                                        >  2:1554976/1‑93 (MQ=255)

                                     ctcactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTAc                                                    <  2:4394708/93‑1 (MQ=255)

                                      tcactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACt                                                   >  2:2630228/1‑93 (MQ=255)

                                      tcactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACt                                                   <  2:4290796/93‑1 (MQ=255)

                                       cactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACtt                                                  <  1:3279211/93‑1 (MQ=255)

                                       cactcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACtt                                                  <  2:1760018/93‑1 (MQ=255)

                                        actcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTg                                                 >  1:3559568/1‑93 (MQ=255)

                                         ctcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGc                                                >  2:4082766/1‑93 (MQ=255)

                                         ctcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGc                                                <  2:352633/93‑1 (MQ=255)

                                          tcaTTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCg                                               >  2:4385799/1‑93 (MQ=255)

                                                cGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatga                                         <  1:1089127/93‑1 (MQ=255)

                                                cGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatga                                         <  2:1580085/93‑1 (MQ=255)

                                                  aCAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgatg                                       >  1:1575696/1‑93 (MQ=255)

                                                  aCAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACatgatg                                       >  1:2022769/1‑93 (MQ=255)

                                                   cAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACAtgatga                                      >  2:2324478/1‑93 (MQ=255)

                                                    aGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGaa                                     <  2:1358355/93‑1 (MQ=255)

                                                      gATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACt                                   <  2:2463343/93‑1 (MQ=255)

                                                      gATTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACt                                   >  1:3594491/1‑93 (MQ=255)

                                                       aTTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTg                                  <  2:1729092/93‑1 (MQ=255)

                                                       aTTACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTg                                  <  1:393331/93‑1 (MQ=255)

                                                       aTTACTGGCTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTg                                  <  2:1620327/93‑1 (MQ=255)

                                                        ttACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTgg                                 >  1:4400957/1‑93 (MQ=255)

                                                         tACTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGc                                <  2:1168557/93‑1 (MQ=255)

                                                          aCTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGcc                               >  1:1910247/1‑93 (MQ=255)

                                                           cTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCg                              <  2:790515/93‑1 (MQ=255)

                                                           cTGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCg                              <  2:1197579/93‑1 (MQ=255)

                                                            tGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCgg                             >  2:2738948/1‑93 (MQ=255)

                                                            tGGGTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCgg                             >  1:1224787/1‑93 (MQ=255)

                                                             gggTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGt                            <  2:3237808/93‑1 (MQ=255)

                                                             gggTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGt                            >  2:110140/1‑93 (MQ=255)

                                                             gggTGTTTATTTGACGACAATGCCGGGGTGTTGGGGCAGCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGt                            <  1:1461640/93‑1 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  2:2231529/93‑1 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  1:2245267/93‑1 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          >  2:4652298/1‑93 (MQ=255)

                                                               gtgtTTATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCt                          <  1:2700397/93‑1 (MQ=255)

                                                                  tttATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGc                       <  2:1079714/93‑1 (MQ=255)

                                                                   ttATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCt                      >  1:3498136/1‑93 (MQ=255)

                                                                    tATTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTc                     >  1:1494598/1‑93 (MQ=255)

                                                                     aTTTGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCa                    >  1:4459083/1‑93 (MQ=255)

                                                                       ttGACGACAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAg                  <  2:1652926/93‑1 (MQ=255)

                                                                         gacgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTc                <  2:411370/93‑1 (MQ=255)

                                                                         gacgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTc                >  2:3153060/1‑93 (MQ=255)

                                                                          gcgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCg               <  1:919766/92‑1 (MQ=255)

                                                                          acgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCg               >  1:3835421/1‑93 (MQ=255)

                                                                           cgacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCgg              <  1:1665425/93‑1 (MQ=255)

                                                                            gacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGt             >  2:923386/1‑93 (MQ=255)

                                                                            gacAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGt             >  1:4243343/1‑93 (MQ=255)

                                                                             acAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTa            <  2:4192974/93‑1 (MQ=255)

                                                                              cAATGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTaa           <  1:3440830/93‑1 (MQ=255)

                                                                               aaTGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAg          >  1:824370/1‑93 (MQ=255)

                                                                                aTGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGt         <  1:1397693/93‑1 (MQ=255)

                                                                                aTGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACCTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGt         <  1:2516681/93‑1 (MQ=255)

                                                                                 tGCCGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTc        >  2:458283/1‑93 (MQ=255)

                                                                                   ccGGGGTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGa      <  2:4506286/93‑1 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCTCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    <  1:3040754/93‑1 (MQ=255)

                                                                                     ggggTGTTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGAtt    >  2:4012034/1‑93 (MQ=255)

TTGCCGATAAACTACCGCGCAGATACACCATGTCATTCTCACTCATTGCGACAGGATTACTGGGTGTTTATTTGACGACAATGCCGGGGTATTGGGGCATCCTCTTTGTCTGGGCGCTATTTGGCGTTACTTGCGACATGATGAACTGGCCGGTCTTGCTCAAGTCGGTAAGTCGATTGG  >  NC_000913/4060022‑4060201

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`