BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,095,111	G→A	intergenic (‑82/‑206)	rhaB ← / → rhaS	rhamnulokinase/RhaS

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,095,111	0	G	A	100.0%	853.5 / NA	234	intergenic (‑82/‑206)	rhaB/rhaS	rhamnulokinase/RhaS
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (131/103); total (131/103)

Only 100 of 241 total aligned reads displayed.

AAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT  >  NC_000913/4095022‑4095200

gtcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGcc                                                                                        >  2:84767‑M2/12‑93 (MQ=255)

 tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCa                                                                                       >  2:4627495‑M2/11‑93 (MQ=255)

 tcgacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCa                                                                                       >  1:223008‑M2/11‑93 (MQ=255)

   gacatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGCCCTTCTCGTTACTGACAGGAAAATGAGCCAtt                                                                                     <  1:2299961‑M2/85‑1 (MQ=255)

    acatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTg                                                                                    >  2:3866515‑M2/8‑93 (MQ=255)

    acatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTg                                                                                    <  2:3593908‑M2/86‑1 (MQ=255)

    acatatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTg                                                                                    <  2:1867351‑M2/86‑1 (MQ=255)

     catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTgg                                                                                   >  1:4634989‑M2/7‑93 (MQ=255)

     catatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTgg                                                                                   >  1:3581435‑M2/7‑93 (MQ=255)

      atatgGAGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGTGCCTGAATTCGCGACCTTCTCGTTACTGGCAGGAAAATGAGCCATTGGc                                                                                  >  2:734235‑M2/6‑93 (MQ=255)

       tatgGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCa                                                                                 >  1:74174‑M2/5‑93 (MQ=255)

           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCa                                                                             <  1:1149032/93‑1 (MQ=255)

           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCa                                                                             >  2:1616416/1‑93 (MQ=255)

           gtgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCa                                                                             <  1:2814684/93‑1 (MQ=255)

            tgATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAg                                                                            <  1:1997658/93‑1 (MQ=255)

               tCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGa                                                                         >  2:4685238/1‑93 (MQ=255)

                ccTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaa                                                                        <  2:524948/93‑1 (MQ=255)

                 ctgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGaaa                                                                       <  1:377278/93‑1 (MQ=255)

                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      >  1:1047662/1‑93 (MQ=255)

                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      <  2:2117633/93‑1 (MQ=255)

                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      >  2:2998020/1‑93 (MQ=255)

                  tgctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAg                                                                      <  2:4294320/93‑1 (MQ=255)

                   tctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCCACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     <  1:2687889/92‑1 (MQ=255)

                   gctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     >  1:650463/1‑93 (MQ=255)

                   gctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGa                                                                     >  1:2895798/1‑93 (MQ=255)

                    ctgAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGAt                                                                    >  2:1406148/1‑93 (MQ=255)

                      gAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGa                                                                  <  1:711867/93‑1 (MQ=255)

                      gAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGa                                                                  >  1:2522058/1‑93 (MQ=255)

                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 <  1:3091852/93‑1 (MQ=255)

                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 >  1:453134/1‑93 (MQ=255)

                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 >  2:3317352/1‑93 (MQ=255)

                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 >  1:3675736/1‑93 (MQ=255)

                       aaTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTAATGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGaa                                                                 <  2:2869701/93‑1 (MQ=255)

                        aTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAc                                                                <  2:4043594/93‑1 (MQ=255)

                        aTTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAAc                                                                <  1:2568469/93‑1 (MQ=255)

                         tttCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACg                                                               <  2:1438830/93‑1 (MQ=255)

                          ttCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGt                                                              <  2:4557410/93‑1 (MQ=255)

                               tACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCAATTGGCAACCAGGGAAAGATGAAAGtgatga                                                         >  1:2905111/1‑93 (MQ=255)

                                  caCCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGt                                                      <  1:1400960/92‑1 (MQ=255)

                                     cAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTca                                                   <  1:2043624/93‑1 (MQ=255)

                                      aGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTcac                                                  <  2:2197754/93‑1 (MQ=255)

                                      aGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTcac                                                  >  1:774709/1‑93 (MQ=255)

                                       gTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTcaca                                                 >  2:1384251/1‑93 (MQ=255)

                                        tCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACaa                                                <  1:479293/93‑1 (MQ=255)

                                         cTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAt                                               <  1:3897364/93‑1 (MQ=255)

                                         cTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAt                                               >  1:3151080/1‑93 (MQ=255)

                                          tAAAATGCGCCTGATTTCGCAACCTCCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAtt                                              <  2:27579/93‑1 (MQ=255)

                                          tAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAtt                                              <  2:2909649/93‑1 (MQ=255)

                                          tAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAtt                                              >  2:3849299/1‑93 (MQ=255)

                                           aaaaaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAAttt                                             >  1:1624618/1‑93 (MQ=255)

                                              aaGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCt                                          >  1:3123673/1‑93 (MQ=255)

                                                 cgcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCTACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGaa                                       <  1:3296228/93‑1 (MQ=255)

                                                 cgcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGaa                                       <  2:3821260/93‑1 (MQ=255)

                                                  gcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAt                                      >  1:2193972/1‑93 (MQ=255)

                                                  gcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAt                                      <  2:1169280/93‑1 (MQ=255)

                                                  gcCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAt                                      <  1:4463016/93‑1 (MQ=255)

                                                   ccTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     >  1:332689/1‑93 (MQ=255)

                                                   ccTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     >  1:4340048/1‑93 (MQ=255)

                                                   ccTAAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAAtt                                     <  1:1414203/93‑1 (MQ=255)

                                                    cTGAACTCTCGCCCTTCTCGTTACTGACAGGAAAATGAGCCATGGGCAACCAGGGAAAGATGAACGTGATGATGGTCACAATTTGCTGAATtg                                    <  2:3216301/93‑1 (MQ=255)

                                                     tGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgt                                   >  1:1566598/1‑93 (MQ=255)

                                                     tGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgt                                   <  2:2485219/93‑1 (MQ=255)

                                                      gAATTCGTGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgtg                                  <  1:3986294/93‑1 (MQ=255)

                                                      gAATTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATtgtg                                  >  1:121061/1‑93 (MQ=255)

                                                        aTTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggt                                >  2:1203945/1‑93 (MQ=255)

                                                        aTTCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggt                                >  2:4444923/1‑93 (MQ=255)

                                                         ttCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggtg                               >  1:2969249/1‑93 (MQ=255)

                                                         ttCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggtg                               >  1:3267724/1‑93 (MQ=255)

                                                         ttCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTgtggtg                               <  1:2377674/93‑1 (MQ=255)

                                                          tCGCGACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtga                              >  2:1665784/1‑93 (MQ=255)

                                                            gcgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatg                            <  1:4068952/93‑1 (MQ=255)

                                                            gcgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatg                            >  1:331546/1‑93 (MQ=255)

                                                             cgACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgt                           <  2:3542356/93‑1 (MQ=255)

                                                              gACCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtg                          <  1:166150/93‑1 (MQ=255)

                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         >  2:825533/1‑93 (MQ=255)

                                                               aCCTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGgtgatgtga                         >  2:1832012/1‑93 (MQ=255)

                                                                ccTTCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTATGgtgatgtgat                        >  1:1870361/1‑93 (MQ=255)

                                                                 cTTCTCGCTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGtgatgtgatg                       >  1:515537/1‑93 (MQ=255)

                                                                  ttCTCGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGc                      >  2:3296587/1‑93 (MQ=255)

                                                                   tctcGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCt                     <  1:2151133/93‑1 (MQ=255)

                                                                   tctcGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCt                     >  1:3546342/1‑93 (MQ=255)

                                                                     tcGTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCa                   <  2:3070272/93‑1 (MQ=255)

                                                                       gTTGCTGACAGGAAAATGAGCCATTGCCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 <  2:3700777/93‑1 (MQ=255)

                                                                       gTTACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 >  1:4135677/1‑93 (MQ=255)

                                                                       gTTACTGACAGGAAAATGAGCCAGTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCAcc                 <  1:1829892/93‑1 (MQ=255)

                                                                        ttACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCg                >  1:4191386/1‑93 (MQ=255)

                                                                         tACTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGc               >  1:293651/1‑93 (MQ=255)

                                                                          aCTGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCa              >  1:3870711/1‑93 (MQ=255)

                                                                            tGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAtt            <  1:3370997/93‑1 (MQ=255)

                                                                            tGACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAtt            <  1:2091705/93‑1 (MQ=255)

                                                                             gACAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCAttt           >  1:3030646/1‑93 (MQ=255)

                                                                               cAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTcc         >  2:707341/1‑93 (MQ=255)

                                                                               cAGGAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTcc         >  1:3761578/1‑93 (MQ=255)

                                                                                 ggAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTg       >  2:324448/1‑93 (MQ=255)

                                                                                 ggAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTg       >  2:4426951/1‑93 (MQ=255)

                                                                                 ggAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTg       >  2:4316423/1‑93 (MQ=255)

                                                                                 ggAAAATGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTg       >  1:615346/1‑93 (MQ=255)

                                                                                    aaaTGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGaaa    >  2:344144/1‑93 (MQ=255)

                                                                                      aTGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAt  <  2:2631841/93‑1 (MQ=255)

                                                                                      aTGAGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAt  <  2:2062794/93‑1 (MQ=255)

AAGGTCATAATGTGATCCTGCTGAATTTCATTACGACCAGTCTAAAAAGCGCCTGAATTCGCGACCTTCTCGTTACTGACAGGAAAATGGGCCATTGGCAACCAGGGAAAGATGAACGTGATGATGTTCACAATTTGCTGAATTGTGGTGATGTGATGCTCACCGCATTTCCTGAAAAT  >  NC_000913/4095022‑4095200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`