BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,116,372	T→C	intergenic (+32/+53)	yiiU → / ← menG	hypothetical protein/MenG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,116,372	0	T	C	100.0%	748.4 / NA	233	intergenic (+32/+53)	yiiU/menG	hypothetical protein/MenG
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (84/149); total (84/149)

Only 100 of 239 total aligned reads displayed.

AGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACTGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATC  >  NC_000913/4116282‑4116461

 gcagAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACcgtg                                                                                         >  1:3790374/1‑93 (MQ=255)

  cagAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCgtgt                                                                                        <  2:232788/93‑1 (MQ=255)

   agAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTa                                                                                       >  2:680918/1‑93 (MQ=255)

   agAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTa                                                                                       <  2:3722308/93‑1 (MQ=255)

    gAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAg                                                                                      <  1:2708247/93‑1 (MQ=255)

    gAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAg                                                                                      >  2:1617633/1‑93 (MQ=255)

    gAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAg                                                                                      >  1:4581164/1‑93 (MQ=255)

    gAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAg                                                                                      >  1:886370/1‑93 (MQ=255)

     aaCGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAgg                                                                                     <  1:2966923/93‑1 (MQ=255)

     aaCGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAgg                                                                                     <  1:4421124/93‑1 (MQ=255)

       cGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGcc                                                                                   >  2:1020304/1‑93 (MQ=255)

        ggCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCa                                                                                  >  1:1221467/1‑93 (MQ=255)

         gCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCaa                                                                                 >  1:2894333/1‑93 (MQ=255)

           tGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACa                                                                               >  2:10781/1‑93 (MQ=255)

              cAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGt                                                                            <  2:1425673/93‑1 (MQ=255)

              cAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGt                                                                            <  1:953188/93‑1 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTCCCGTGTAGGCCAACAGGTaa                                                                          >  2:624488/1‑93 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                          <  1:1132925/93‑1 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                          <  2:2591706/93‑1 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                          <  2:436401/93‑1 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                          >  2:823952/1‑93 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                          >  1:1628236/1‑93 (MQ=255)

                 gAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAAc                                                                         <  2:4056612/93‑1 (MQ=255)

                   aCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                       <  2:1346207/93‑1 (MQ=255)

                   aCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                       >  2:2305875/1‑93 (MQ=255)

                    cGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCa                                                                      <  2:2731248/93‑1 (MQ=255)

                      tCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑a                                                                   <  2:4188998/93‑1 (MQ=255)

                        tGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑aaa                                                                 <  1:1357544/93‑1 (MQ=255)

                        tGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑aaa                                                                 <  1:1394759/93‑1 (MQ=255)

                        tGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑aaa                                                                 <  2:3755851/93‑1 (MQ=255)

                         gCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑aaaa                                                                <  2:4277783/93‑1 (MQ=255)

                           aGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑aaaaaa                                                              >  1:2523551/1‑93 (MQ=255)

                            ggCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAg                                                             >  2:2147021/1‑93 (MQ=255)

                              cccTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGc                                                           <  2:3001338/93‑1 (MQ=255)

                              cccTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGc                                                           <  2:3334848/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       <  1:175741/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       >  2:1478760/1‑93 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       <  2:1321579/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       <  1:1892011/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       <  1:2329391/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCt                                                       <  1:3920093/93‑1 (MQ=255)

                                   ctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCtt                                                      <  1:367954/93‑1 (MQ=255)

                                    tgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTg                                                     <  1:2069859/93‑1 (MQ=255)

                                    tgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTg                                                     >  1:1578065/1‑93 (MQ=255)

                                     gggTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGc                                                    <  1:2419653/93‑1 (MQ=255)

                                     gggTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGc                                                    <  1:695984/93‑1 (MQ=255)

                                     aggTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGc                                                    <  1:414333/92‑1 (MQ=255)

                                        tCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGt                                                 >  2:2204446/1‑93 (MQ=255)

                                          gCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGc                                               >  2:4234164/1‑93 (MQ=255)

                                           cATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGcc                                              <  1:1088379/93‑1 (MQ=255)

                                           cATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGcc                                              >  1:1523348/1‑93 (MQ=255)

                                            aTGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCt                                             <  2:2979787/93‑1 (MQ=255)

                                             tGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCtt                                            <  1:3208306/93‑1 (MQ=255)

                                             tGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCtt                                            <  1:4017483/93‑1 (MQ=255)

                                               gAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTc                                          <  1:473477/93‑1 (MQ=255)

                                                  gagGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCttt                                       >  1:3430862/1‑92 (MQ=255)

                                                  gagGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCCTGCGGTGCCTTTCttt                                       >  1:233791/1‑92 (MQ=255)

                                                     gTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAAGGAACCTT‑CGGGGCCCTTTTTTTCa                                    >  2:1670644/1‑93 (MQ=255)

                                                     gTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCa                                    <  1:2024902/93‑1 (MQ=255)

                                                     gTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCa                                    <  1:1478830/93‑1 (MQ=255)

                                                      tCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCAt                                   <  2:2468879/93‑1 (MQ=255)

                                                        tGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTc                                 <  1:373481/93‑1 (MQ=255)

                                                         gATTCCGCTTCAACTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCCTTCa                                <  2:1750670/93‑1 (MQ=255)

                                                          aTTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCCTGCGGTGCCTTTCTTATCAtttca                               >  1:4124887/1‑90 (MQ=255)

                                                           ttACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAat                              <  2:765929/93‑1 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTGCCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  1:2587355/93‑1 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  2:3600609/93‑1 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  1:2774613/93‑1 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  2:127956/93‑1 (MQ=255)

                                                             aCGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGACGTGGCTTTCTTATTCTTCAatat                            >  2:3368589/1‑93 (MQ=255)

                                                             aCGCTTCAGCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAatat                            >  2:4586365/1‑93 (MQ=255)

                                                               gCTTCATCTTCCGCGTAATTTCTTTACCCTGTAGGCCAACAGGTAAAGCAG‑AAAAAAGGCGCCATTCGGTGGCTTTTTTATACTTCTATATcc                          >  1:4042323/1‑93 (MQ=255)

                                                                cTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCa                         >  1:607486/1‑93 (MQ=255)

                                                                cTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCa                         <  1:1935363/93‑1 (MQ=255)

                                                                cTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCa                         <  1:1293904/93‑1 (MQ=255)

                                                                 ttCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCCTGCGGTGGCTTTTTTTTTATTCAATATctca                        >  1:906954/1‑90 (MQ=255)

                                                                  tCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGc                       <  1:3712498/93‑1 (MQ=255)

                                                                  tCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGc                       >  2:3558943/1‑93 (MQ=255)

                                                                    aTCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTTAATATCCAGCgg                     >  2:2804775/1‑93 (MQ=255)

                                                                    aTCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCgg                     >  2:313048/1‑93 (MQ=255)

                                                                      cTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAAGCAACCTGCGGGGGCCTTCTTTTTATTCAATATTCAACGGAt                   >  1:3237205/1‑93 (MQ=255)

                                                                       ttCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtc                  <  1:2240477/93‑1 (MQ=255)

                                                                        tCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtct                 <  2:1417851/93‑1 (MQ=255)

                                                                         ccGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtctt                <  2:3856692/93‑1 (MQ=255)

                                                                          cgcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtcttc               <  1:4464338/93‑1 (MQ=255)

                                                                          cgcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtcttc               <  1:837647/93‑1 (MQ=255)

                                                                           gcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtcttct              >  1:3859004/1‑93 (MQ=255)

                                                                           gcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtcttct              <  2:3296360/93‑1 (MQ=255)

                                                                           gcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAAGCGACACGTGGGGGCTTTCTTATTATTCACTATTCATCTGCtcttct              >  2:185276/1‑93 (MQ=255)

                                                                            cgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑CAAAAAGGCACCTTGCGGTGGCTTTTTTATTATTCAATATCCAGCAGAtcctctt             >  2:324268/1‑92 (MQ=255)

                                                                              tAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaa           >  2:4528572/1‑93 (MQ=255)

                                                                              tAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaa           <  2:898794/93‑1 (MQ=255)

                                                                               aaTTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaaa          >  1:304819/1‑93 (MQ=255)

                                                                               aaTTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaaa          <  1:3965233/93‑1 (MQ=255)

                                                                               aaTTTCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCAACTTGCCGGGCCTTTCTTATCATTCCATATCCAGGGGATATTCTGaaa          >  1:1867133/1‑93 (MQ=255)

                                                                                  ttCTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaa       <  1:505556/93‑1 (MQ=255)

                                                                                    cTTTACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaata     <  1:3505098/93‑1 (MQ=255)

                                                                                     tttACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaataa    <  2:3414107/93‑1 (MQ=255)

                                                                                     tttACCGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATAACCAGCGGATCTTCTGAAAGaataa    >  2:1137572/1‑93 (MQ=255)

                                                                                       tACCGTGTAGGCCAACAGATAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATc  <  2:2700624/93‑1 (MQ=255)

AGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACTGTGTAGGCCAACAGGTAACGCAG‑AAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATC  >  NC_000913/4116282‑4116461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`