BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,125,604	G→A	intergenic (‑130/+54)	yiiX ← / ← metJ	hypothetical protein/MetJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,125,604	0	G	A	100.0%	837.9 / NA	234	intergenic (‑130/+54)	yiiX/metJ	hypothetical protein/MetJ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (121/113); total (121/113)

Only 100 of 241 total aligned reads displayed.

AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC  >  NC_000913/4125514‑4125693

 aCGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCt                                                                                        <  1:2948718/93‑1 (MQ=255)

 aCGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCt                                                                                        >  1:4508632/1‑93 (MQ=255)

  cGTGCTCGGTGTTTATGCCGGATGCGGCGTGAACATCTTATCGGGCCTGCAACGTTGTGCAAATTCAATAAATTGCAATATGACGTAGACCTg                                                                                       >  2:1604329/1‑93 (MQ=18)

   gTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGa                                                                                      <  1:3648711/93‑1 (MQ=255)

   gTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGa                                                                                      >  1:1975218/1‑93 (MQ=255)

    tGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGAt                                                                                     <  2:1057139/93‑1 (MQ=255)

     gCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATa                                                                                    <  2:4178522/93‑1 (MQ=255)

      cTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATaa                                                                                   <  2:3439399/93‑1 (MQ=255)

       tCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAg                                                                                  <  1:412240/93‑1 (MQ=255)

       tCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAg                                                                                  <  1:1160172/93‑1 (MQ=255)

        cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAgg                                                                                 >  2:1544857/1‑92 (MQ=255)

        cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGc                                                                                 <  1:2092915/93‑1 (MQ=255)

        cGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGc                                                                                 <  1:2747515/93‑1 (MQ=255)

         gttgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCg                                                                                <  2:1433130/93‑1 (MQ=255)

          ttgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGt                                                                               >  1:2838787/1‑93 (MQ=255)

           tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa                                                                              <  1:2002859/93‑1 (MQ=255)

           tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa                                                                              <  1:2106176/93‑1 (MQ=255)

           tgttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTa                                                                              <  2:3399829/93‑1 (MQ=255)

            gttTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAg                                                                             >  1:1501220/1‑93 (MQ=255)

             tttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAgc                                                                            <  1:172468/93‑1 (MQ=255)

              ttATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAgcg                                                                           >  1:1336826/1‑93 (MQ=255)

                aTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCa                                                                         <  1:371957/93‑1 (MQ=255)

                  tccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATc                                                                       <  1:123404/92‑1 (MQ=255)

                  gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATc                                                                       <  1:927061/93‑1 (MQ=255)

                    cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAg                                                                     <  1:3237737/93‑1 (MQ=255)

                     ggATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAgg                                                                    <  2:3159759/93‑1 (MQ=255)

                      gATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGc                                                                   >  1:3075745/1‑93 (MQ=255)

                         gcggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGAt                                                                >  1:2578540/1‑93 (MQ=255)

                          cggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGAtt                                                               <  2:3894976/93‑1 (MQ=255)

                           ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc                                                              <  2:2737311/93‑1 (MQ=255)

                           ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc                                                              >  1:1401750/1‑93 (MQ=255)

                           ggcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTc                                                              <  1:774240/93‑1 (MQ=255)

                            gcgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTcc                                                             <  1:104194/93‑1 (MQ=255)

                             cgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCa                                                            <  2:4217719/93‑1 (MQ=255)

                             cgTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCa                                                            <  1:3457443/93‑1 (MQ=255)

                              gTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCAc                                                           >  2:2884270/1‑93 (MQ=255)

                               tGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCagt                                                          >  1:245250/1‑91 (MQ=255)

                                gAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTc                                                         <  1:4358009/93‑1 (MQ=255)

                                gAACCCCTTATCCGGCATACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTc                                                         <  2:3539552/93‑1 (MQ=255)

                                 aaCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTcc                                                        <  2:3654415/93‑1 (MQ=255)

                                 aaCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTcc                                                        >  1:4173580/1‑93 (MQ=255)

                                  aCGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCcg                                                       <  1:691694/93‑1 (MQ=255)

                                      cTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgcc                                                   >  1:4474857/1‑93 (MQ=255)

                                      cTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGAGCATCAGGCGAATCCACTCCGcgcc                                                   >  1:2503806/1‑93 (MQ=255)

                                       ttATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgccg                                                  >  1:4440459/1‑93 (MQ=255)

                                        tATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGcgccgc                                                 <  2:3671022/93‑1 (MQ=255)

                                          tCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctc                                               >  1:2620516/1‑93 (MQ=255)

                                           ccGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctct                                              <  1:1214959/93‑1 (MQ=255)

                                           ccGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGctct                                              <  2:1302599/93‑1 (MQ=255)

                                              gCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCtttt                                           >  2:4031683/1‑93 (MQ=255)

                                               ccTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCttttt                                          <  2:1414174/93‑1 (MQ=255)

                                                cTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCtttttt                                         >  1:3383886/1‑93 (MQ=255)

                                                   cAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCt                                      >  2:839303/1‑93 (MQ=255)

                                                    aaGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCtt                                     <  1:4035048/93‑1 (MQ=255)

                                                    aaGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCtt                                     <  1:1577448/93‑1 (MQ=255)

                                                      gTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTa                                   >  2:4640559/1‑93 (MQ=255)

                                                      gTTCGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTa                                   >  1:2678158/1‑93 (MQ=255)

                                                         cGTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTa                                <  1:3304478/93‑1 (MQ=255)

                                                          gTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAt                               <  2:2854894/93‑1 (MQ=255)

                                                          gTGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAt                               >  1:2862830/1‑93 (MQ=255)

                                                           tGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTAtt                              >  2:1957497/1‑93 (MQ=255)

                                                           tGCAAATTCAATAAATTGCAATATGACGTAGACCTGATAAGCGGAGCGCATCAGTCGGTGCCGCTGCGCTTGGCTCTGTTGTGCTTTAGTAtt                              >  2:2069252/1‑93 (MQ=16)

                                                               aaTTCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCa                          >  2:3992289/1‑93 (MQ=255)

                                                                 ttCAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACg                        >  2:3528065/1‑93 (MQ=255)

                                                                   cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTCGCATTGCCACGtc                      >  2:121900/1‑93 (MQ=37)

                                                                   cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc                      <  1:3991214/93‑1 (MQ=255)

                                                                   cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc                      >  2:2213/1‑93 (MQ=255)

                                                                   cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc                      <  1:2733290/93‑1 (MQ=255)

                                                                   cAATAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtc                      <  1:3784477/93‑1 (MQ=255)

                                                                    aaTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtct                     >  1:593641/1‑93 (MQ=255)

                                                                    aaTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtct                     >  1:891954/1‑93 (MQ=255)

                                                                     aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc                    >  1:3945879/1‑93 (MQ=255)

                                                                     aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc                    >  1:3888887/1‑93 (MQ=255)

                                                                     aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc                    >  2:4123304/1‑93 (MQ=255)

                                                                     aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc                    <  2:3693274/93‑1 (MQ=255)

                                                                     aTAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGtctc                    >  1:2211494/1‑93 (MQ=255)

                                                                      tAAATTGCCATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTcc                   >  2:4577034/1‑93 (MQ=255)

                                                                      tAAATTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGACTCCACTCCGCGCCGCTCTATCTTGTCTTAGTATTCCCACGTCTcc                   >  1:4685846/1‑93 (MQ=37)

                                                                       aaaTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCg                  >  1:4228442/1‑93 (MQ=255)

                                                                       aaaTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCg                  >  1:1020122/1‑93 (MQ=255)

                                                                         aTTGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCggg                <  1:3131970/93‑1 (MQ=255)

                                                                          ttGCAATATGACGTAGATCTGATAAGCGTAGCGCATCAGGCGATTCCCCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt               <  2:4534095/93‑1 (MQ=255)

                                                                          ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt               >  2:1844744/1‑93 (MQ=255)

                                                                          ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt               >  2:468101/1‑93 (MQ=255)

                                                                          ttGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGt               <  2:2562453/93‑1 (MQ=255)

                                                                           tGCAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGtt              >  2:652368/1‑93 (MQ=255)

                                                                             cAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTaa            <  1:1657294/93‑1 (MQ=255)

                                                                             cAATATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTaa            <  1:230727/93‑1 (MQ=255)

                                                                              aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt           <  1:1666933/93‑1 (MQ=255)

                                                                              aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt           >  2:1313607/1‑93 (MQ=255)

                                                                              aaTATGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAAt           >  1:1456593/1‑93 (MQ=255)

                                                                               atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCCCTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc          <  1:3583008/93‑1 (MQ=255)

                                                                               atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc          >  1:2775359/1‑93 (MQ=255)

                                                                               atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc          >  2:428821/1‑93 (MQ=255)

                                                                               atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc          >  2:4439503/1‑93 (MQ=255)

                                                                               atatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATc          <  2:3210038/93‑1 (MQ=255)

                                                                                tatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATcc         >  1:2075678/1‑93 (MQ=255)

                                                                                tatGACGTAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATcc         >  1:323268/1‑93 (MQ=255)

                                                                                       tAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCAtctc  >  2:2606135/1‑93 (MQ=255)

                                                                                       tAGACCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCAtctc  >  2:3223109/1‑93 (MQ=255)

AACGTGCTCGTTGTTTATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAGTTCGTGCAAATTCAATAAATTGCAATATGACGTAGGCCTGATAAGCGTAGCGCATCAGGCGATTCCACTCCGCGCCGCTCTTTTTTGCTTTAGTATTCCCACGTCTCCGGGTTAATCCCCATCTC  >  NC_000913/4125514‑4125693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`