BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	482,211	T→C	T473A (ACC→GCC)	acrB ←	acridine efflux pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	482,211	0	T	C	100.0%	508.6 / NA	160	T473A (ACC→GCC)	acrB	acridine efflux pump
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (76/84); total (76/84)

Only 100 of 162 total aligned reads displayed.

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        <  1:3019950/93‑1 (MQ=255)

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        >  2:3957194/1‑93 (MQ=255)

  ttGGCAATCGTTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATa                                                                                       <  2:1823725/93‑1 (MQ=255)

  ttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATa                                                                                       <  1:158495/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  1:4559832/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  2:2734478/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  1:3064918/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  2:893538/93‑1 (MQ=255)

      cAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAgaga                                                                                   <  2:4576050/93‑1 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  <  1:3749896/93‑1 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  1:2716468/1‑93 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 >  1:3796761/1‑93 (MQ=255)

          cGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGGCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTg                                                                               >  2:1646786/1‑93 (MQ=255)

          cGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTg                                                                               <  1:1473066/93‑1 (MQ=255)

             tttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACg                                                                            >  1:3646562/1‑93 (MQ=255)

             tttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACg                                                                            >  2:4011213/1‑93 (MQ=255)

             tttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACg                                                                            >  1:2793827/1‑93 (MQ=255)

             tttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACg                                                                            >  1:2968794/1‑93 (MQ=255)

              ttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACga                                                                           <  2:3693456/93‑1 (MQ=255)

               tCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgat                                                                          <  1:200773/93‑1 (MQ=255)

               tCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgat                                                                          <  1:352092/93‑1 (MQ=255)

                cAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgata                                                                         >  1:2120427/1‑93 (MQ=255)

                 aGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatag                                                                        <  2:761768/93‑1 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       <  1:3927682/93‑1 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       <  2:4135363/93‑1 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       >  1:953258/1‑93 (MQ=255)

                   cATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagat                                                                      >  2:3123753/1‑93 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  1:1211890/93‑1 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  2:1883420/93‑1 (MQ=255)

                     tggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGatagatag                                                                    >  2:1539621/1‑93 (MQ=255)

                     tggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGatagatag                                                                    >  1:135712/1‑93 (MQ=255)

                      ggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGc                                                                   <  1:3653628/93‑1 (MQ=255)

                      ggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGc                                                                   <  1:79660/93‑1 (MQ=255)

                      ggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGc                                                                   <  2:1176525/93‑1 (MQ=255)

                      ggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGc                                                                   <  1:4444882/93‑1 (MQ=255)

                       gtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCa                                                                  <  1:344805/93‑1 (MQ=255)

                       gtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCa                                                                  >  2:3137303/1‑93 (MQ=255)

                         ggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCAcc                                                                <  2:3802349/93‑1 (MQ=255)

                         ggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCAcc                                                                >  2:3159692/1‑93 (MQ=255)

                            acaAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGt                                                             >  1:4248394/1‑93 (MQ=255)

                            acaAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGt                                                             <  2:811039/93‑1 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           >  1:2394816/1‑93 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           <  2:4385353/93‑1 (MQ=255)

                               aaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGa                                                          <  2:2946394/93‑1 (MQ=255)

                               aaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGa                                                          >  1:1016963/1‑93 (MQ=255)

                                agagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGaa                                                         <  2:647470/93‑1 (MQ=255)

                                 gagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAAc                                                        <  2:291704/93‑1 (MQ=255)

                                 gagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAAc                                                        <  2:3858848/93‑1 (MQ=255)

                                   gCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCg                                                      >  1:1055206/1‑93 (MQ=255)

                                     tGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGcc                                                    >  2:516611/1‑93 (MQ=255)

                                      ggAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCa                                                   >  1:3668270/1‑93 (MQ=255)

                                        aGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCaaa                                                 >  1:1751002/1‑93 (MQ=255)

                                         gTCAGGATCAACGCCACCAGTACCGACAGCTCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaag                                                <  1:230640/93‑1 (MQ=255)

                                          tCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaaga                                               >  2:2213694/1‑93 (MQ=255)

                                          tCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaaga                                               <  2:3724342/93‑1 (MQ=255)

                                           cAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaa                                              <  2:2097456/93‑1 (MQ=255)

                                           cAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaa                                              <  1:907634/93‑1 (MQ=255)

                                           cAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaa                                              <  2:499135/93‑1 (MQ=255)

                                            aGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaag                                             >  1:1465388/1‑93 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            <  2:84209/93‑1 (MQ=255)

                                              gATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGc                                           <  2:3783534/93‑1 (MQ=255)

                                               aTCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGcc                                          <  2:2164108/93‑1 (MQ=255)

                                               aTCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGcc                                          <  2:1697794/93‑1 (MQ=255)

                                               aTCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGcc                                          <  1:4406469/93‑1 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         <  2:321883/93‑1 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         <  2:2392660/93‑1 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         >  2:3645339/1‑93 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         >  2:3619894/1‑93 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         >  2:2789540/1‑93 (MQ=255)

                                                tCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCa                                         <  1:109435/93‑1 (MQ=255)

                                                 cAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCAt                                        <  2:706441/93‑1 (MQ=255)

                                                   aCGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCg                                      >  2:360193/1‑93 (MQ=255)

                                                      ccaccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTa                                   >  1:3167275/1‑93 (MQ=255)

                                                        accaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACg                                 >  2:3267498/1‑93 (MQ=255)

                                                         ccaGTGCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGa                                <  1:2620973/93‑1 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               <  2:1057267/93‑1 (MQ=255)

                                                            gTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATa                             <  1:640677/93‑1 (MQ=255)

                                                            gTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATa                             >  2:2542807/1‑93 (MQ=255)

                                                              aCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAcc                           <  1:1866309/93‑1 (MQ=255)

                                                               ccGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccg                          >  1:4604312/1‑93 (MQ=255)

                                                               ccGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccg                          >  2:530724/1‑93 (MQ=255)

                                                                cGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAacgc                         <  2:4467894/93‑1 (MQ=255)

                                                                 gACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgcc                        >  1:3227927/1‑93 (MQ=255)

                                                                  aCAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgccg                       >  2:3740636/1‑93 (MQ=255)

                                                                       gcCATTGCTGAAACAATGGCAATAGAGAACGGACGATAGAGAGCCCCAGTAGAACCGCCAAAGAAGGCGATCGGTACGAATACCGCCGACAGt                  <  2:3645999/93‑1 (MQ=21)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               <  2:259225/93‑1 (MQ=255)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               >  1:2705591/1‑93 (MQ=255)

                                                                              cTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcg           <  2:3407956/93‑1 (MQ=255)

                                                                               tGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgc          >  1:615099/1‑93 (MQ=255)

                                                                               tGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgc          >  1:194559/1‑93 (MQ=255)

                                                                               tGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgc          >  2:2249082/1‑93 (MQ=255)

                                                                                gAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgcg         >  2:1602099/1‑93 (MQ=255)

                                                                                gAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgcg         >  1:223532/1‑93 (MQ=255)

                                                                                  aaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAGCGCCGACAGTACCATCGCGAt       >  1:4138071/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATa      >  2:3254459/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGACGACAGTACCATCGCGATa      >  2:1372554/1‑93 (MQ=255)

                                                                                     aaTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTATGAATACCGCCGACAGTACCATCGCGATAcc    >  1:1248954/1‑93 (MQ=255)

                                                                                      aTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCg   <  1:4197628/93‑1 (MQ=255)

                                                                                       tGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGa  >  2:4105773/1‑93 (MQ=255)

                                                                                       tGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGa  >  2:2000675/1‑93 (MQ=255)

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`