BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,348,017	C→T	A408A (GCG→GCA)	yjdH ←	putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,348,017	0	C	T	100.0%	812.6 / NA	224	A408A (GCG→GCA)	yjdH	putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (103/121); total (103/121)

Only 100 of 238 total aligned reads displayed.

CGTGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTCGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTATT  >  NC_000913/4347927‑4348106

 gTGGTAATCAGCGTCGCGGCCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGGGTATGTTCTAAATCGGTtgcc                                                                                        >  2:1795439/1‑92 (MQ=255)

 gTGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcg                                                                                        >  2:666535/1‑93 (MQ=255)

  tGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgc                                                                                       <  2:1221394/93‑1 (MQ=255)

  tGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgc                                                                                       >  1:96794/1‑93 (MQ=255)

   ggTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgcg                                                                                      >  1:4083740/1‑93 (MQ=255)

     tAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGt                                                                                    >  2:3917483/1‑93 (MQ=255)

     tAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGt                                                                                    <  2:2129642/93‑1 (MQ=255)

      aaTCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGtt                                                                                   >  2:2166400/1‑93 (MQ=255)

       aTCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTa                                                                                  >  1:4249892/1‑93 (MQ=255)

        tCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGTGTATGGCCTAAATCGGTTGCGCGGTTaa                                                                                 <  2:3744196/93‑1 (MQ=255)

        tCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTaa                                                                                 <  1:3687461/93‑1 (MQ=255)

          aGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATc                                                                               >  2:3561440/1‑93 (MQ=255)

           gCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCt                                                                              <  2:4217944/93‑1 (MQ=255)

            cGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCtt                                                                             <  1:788216/93‑1 (MQ=255)

            cGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCtt                                                                             <  1:2766991/93‑1 (MQ=255)

              tCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGc                                                                           >  1:3735880/1‑93 (MQ=255)

               cgcgACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCt                                                                          <  2:1023130/93‑1 (MQ=255)

                 cgACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGa                                                                        <  1:1269009/93‑1 (MQ=255)

                   aCCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGAtt                                                                      >  2:1573715/1‑93 (MQ=255)

                     cTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaa                                                                    >  2:583691/1‑93 (MQ=255)

                       ggTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaaa                                                                  >  1:3231576/1‑93 (MQ=255)

                        gTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaaaa                                                                 <  1:1965956/93‑1 (MQ=255)

                          ccTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAc                                                               <  2:651092/93‑1 (MQ=255)

                           cTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAcc                                                              >  2:3655018/1‑93 (MQ=255)

                           cTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAcc                                                              <  2:1943502/93‑1 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             >  1:1386766/1‑93 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             <  1:1881123/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  1:2451370/93‑1 (MQ=255)

                                tGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         <  2:1498133/93‑1 (MQ=255)

                                tGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         >  1:2015357/1‑93 (MQ=255)

                                agCCGCTGTCTGGCAGCTGGCTTTCAATGTTTAAAATCAGAGTAAGGACAACATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         <  1:4684913/92‑1 (MQ=255)

                                  ccGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATa                                                       >  2:4374927/1‑93 (MQ=255)

                                  ccGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATa                                                       >  1:3987997/1‑93 (MQ=255)

                                  ccGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATa                                                       <  2:2694828/93‑1 (MQ=255)

                                   cGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATaa                                                      >  1:2351233/1‑93 (MQ=255)

                                   cGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATaa                                                      >  1:4193811/1‑93 (MQ=255)

                                    gCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAc                                                     <  1:2438202/93‑1 (MQ=255)

                                    gCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAc                                                     <  2:1647967/93‑1 (MQ=255)

                                     cTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAcc                                                    <  2:1325589/93‑1 (MQ=255)

                                      tGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCg                                                   >  1:1480719/1‑93 (MQ=255)

                                      tGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCg                                                   >  1:625377/1‑93 (MQ=255)

                                      tGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCg                                                   <  1:1019364/93‑1 (MQ=255)

                                      tGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCg                                                   >  2:2478525/1‑93 (MQ=255)

                                       gTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCgg                                                  <  2:2302272/93‑1 (MQ=255)

                                       gTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCgg                                                  <  2:2517656/93‑1 (MQ=255)

                                       gTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCgg                                                  >  1:2921909/1‑93 (MQ=255)

                                          tGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGgaga                                               <  2:2383775/93‑1 (MQ=255)

                                           ggCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAt                                              >  1:4303685/1‑93 (MQ=255)

                                           ggCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAt                                              <  1:4299870/93‑1 (MQ=255)

                                           ggCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAt                                              >  1:1342899/1‑93 (MQ=255)

                                            gCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAtt                                             >  2:799719/1‑93 (MQ=255)

                                            gCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAtt                                             <  2:3509257/93‑1 (MQ=255)

                                             cAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAttt                                            <  2:4616327/93‑1 (MQ=255)

                                               gCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGa                                          <  1:2126306/93‑1 (MQ=255)

                                                cTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGAt                                         >  2:2793382/1‑93 (MQ=255)

                                                 tGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATc                                        <  1:1065553/93‑1 (MQ=255)

                                                 tGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATc                                        >  1:1142106/1‑93 (MQ=255)

                                                 tGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATc                                        <  1:4066091/93‑1 (MQ=255)

                                                   gCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCtt                                      >  2:1202027/1‑93 (MQ=255)

                                                      ttCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAcc                                   <  2:3957789/93‑1 (MQ=255)

                                                        cACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCca                                 >  2:4498546/1‑93 (MQ=255)

                                                        cACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCca                                 >  2:416084/1‑93 (MQ=255)

                                                        cACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCca                                 <  2:3016601/93‑1 (MQ=255)

                                                           tGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcagca                              >  1:881147/1‑93 (MQ=255)

                                                             tttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCaga                            <  1:189379/93‑1 (MQ=255)

                                                              ttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagag                           >  2:3430408/1‑93 (MQ=255)

                                                              ttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagag                           <  2:4033593/93‑1 (MQ=255)

                                                               tAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagaga                          <  2:243801/93‑1 (MQ=255)

                                                                  aaTCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGcc                       <  1:3369546/93‑1 (MQ=255)

                                                                   aTCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCa                      >  1:453166/1‑93 (MQ=255)

                                                                    tCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCaa                     <  1:4641806/93‑1 (MQ=255)

                                                                    tCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCaa                     <  2:1969500/93‑1 (MQ=255)

                                                                    tCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCaa                     <  1:294671/93‑1 (MQ=255)

                                                                    tCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCaa                     <  1:3871097/93‑1 (MQ=255)

                                                                      aGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAAtc                   <  1:1234356/93‑1 (MQ=255)

                                                                      aGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAAtc                   <  1:281439/93‑1 (MQ=255)

                                                                       gCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAAtct                  >  1:3079601/1‑93 (MQ=255)

                                                                         gTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATctct                <  2:3270044/93‑1 (MQ=255)

                                                                          tATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGCGAGCCACTCTCtt               >  2:2585873/1‑93 (MQ=255)

                                                                           aTGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTc              >  1:300914/1‑93 (MQ=255)

                                                                           aTGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTc              >  2:500494/1‑93 (MQ=255)

                                                                            tGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTcc             >  1:2232717/1‑93 (MQ=255)

                                                                            tGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTcc             >  2:3593988/1‑93 (MQ=255)

                                                                             ggCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCt            <  2:705328/93‑1 (MQ=255)

                                                                              gCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTg           >  1:359285/1‑93 (MQ=255)

                                                                               ccTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAGACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGa          >  2:2663405/1‑93 (MQ=255)

                                                                               ccTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGa          <  2:3460655/93‑1 (MQ=255)

                                                                                 tAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATa        >  1:4339193/1‑93 (MQ=255)

                                                                                 tAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATa        <  1:534656/93‑1 (MQ=255)

                                                                                  aaaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAg       <  1:1848720/93‑1 (MQ=255)

                                                                                  aaaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAg       >  1:167084/1‑93 (MQ=255)

                                                                                  aaaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAg       <  2:2911630/93‑1 (MQ=255)

                                                                                   aaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGt      <  2:3704822/93‑1 (MQ=255)

                                                                                   aaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGt      <  2:473078/93‑1 (MQ=255)

                                                                                     tCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTa    <  1:2597002/93‑1 (MQ=255)

                                                                                     tCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTa    <  2:170003/93‑1 (MQ=255)

                                                                                      cGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTAt   <  1:951125/93‑1 (MQ=255)

                                                                                       ggTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTAtt  >  2:3340389/1‑93 (MQ=255)

                                                                                       ggTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTAtt  <  1:3494736/93‑1 (MQ=255)

                                                                                       ggTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTAtt  >  2:4123195/1‑93 (MQ=255)

CGTGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTCGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTATT  >  NC_000913/4347927‑4348106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`