BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,357,661	A→G	intergenic (‑52/+313)	cadB ← / ← cadC	transport of lysine/cadaverine/CadC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,357,661	0	A	G	100.0%	727.4 / NA	224	intergenic (‑52/+313)	cadB/cadC	transport of lysine/cadaverine/CadC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (93/131); total (93/131)

Only 100 of 225 total aligned reads displayed.

GGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC  >  NC_000913/4357571‑4357750

 gTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTa                                                                                        <  1:672301/93‑1 (MQ=255)

 gTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTa                                                                                        <  1:485920/93‑1 (MQ=255)

  tACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTAt                                                                                       >  2:950898/1‑93 (MQ=255)

     aGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTc                                                                                    <  2:586613/93‑1 (MQ=255)

      ggCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTcc                                                                                   >  2:2575831/1‑93 (MQ=255)

         aaaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTga                                                                                >  1:1931751/1‑93 (MQ=255)

         aaaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTga                                                                                <  2:2547425/93‑1 (MQ=255)

          aaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgac                                                                               >  2:3479297/1‑93 (MQ=255)

          aaTAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgac                                                                               >  2:2945243/1‑93 (MQ=255)

            tAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgacca                                                                             <  1:3613583/93‑1 (MQ=255)

              gCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgaccaga                                                                           <  1:14612/93‑1 (MQ=255)

               cccGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTgaccagac                                                                          <  2:332865/93‑1 (MQ=255)

                  gATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaa                                                                       >  1:112013/1‑93 (MQ=255)

                  gATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaa                                                                       >  1:3239259/1‑93 (MQ=255)

                   aTCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCaaa                                                                      <  1:4469705/93‑1 (MQ=255)

                    tcttctTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAAc                                                                     >  2:669748/1‑93 (MQ=255)

                       tcttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTgg                                                                  >  1:464452/1‑93 (MQ=255)

                       tcttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTgg                                                                  <  1:4173900/93‑1 (MQ=255)

                        cttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGc                                                                 <  1:1019084/93‑1 (MQ=255)

                         ttGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCg                                                                <  2:1839922/93‑1 (MQ=255)

                           ggCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGAt                                                              <  2:3585767/93‑1 (MQ=255)

                            gCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATa                                                             <  2:2664260/93‑1 (MQ=255)

                            gCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATa                                                             <  1:3930401/93‑1 (MQ=255)

                             cAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATaa                                                            <  2:4247856/93‑1 (MQ=255)

                             cAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATaa                                                            <  2:1010364/93‑1 (MQ=255)

                              aGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAg                                                           <  2:2087356/93‑1 (MQ=255)

                              aGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAg                                                           <  2:1955266/93‑1 (MQ=255)

                               gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa                                                          <  2:2861865/93‑1 (MQ=255)

                               gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa                                                          <  2:3495779/93‑1 (MQ=255)

                               gAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGa                                                          <  1:1785222/93‑1 (MQ=255)

                                aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt                                                         >  2:2878217/1‑93 (MQ=255)

                                aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt                                                         >  2:252085/1‑93 (MQ=255)

                                aaCTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGAt                                                         <  2:2987712/93‑1 (MQ=255)

                                  cTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTa                                                       >  2:1187802/1‑93 (MQ=255)

                                   tCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAc                                                      <  1:3199697/93‑1 (MQ=255)

                                   tCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTAc                                                      >  1:1310878/1‑93 (MQ=255)

                                    cATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACt                                                     <  2:1075384/93‑1 (MQ=255)

                                      tGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCa                                                   >  2:4124946/1‑93 (MQ=255)

                                        ctctTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACg                                                 >  1:3118394/1‑93 (MQ=255)

                                         tcttctCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGa                                                >  1:2233692/1‑93 (MQ=255)

                                         tcttctCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGa                                                <  1:1177868/93‑1 (MQ=255)

                                             ctcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaa                                            <  2:4588621/93‑1 (MQ=255)

                                             ctcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGAACAAACTGGCGATAAGATTACTCACGaaaaa                                            >  1:2314446/1‑93 (MQ=255)

                                              tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaaa                                           <  1:4000764/93‑1 (MQ=255)

                                              tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGaaaaaa                                           <  2:3776080/93‑1 (MQ=255)

                                              tcCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGAGAAGATTACTCACGaaaaaa                                           <  2:4579407/93‑1 (MQ=255)

                                               ccTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAg                                          >  1:3988315/1‑93 (MQ=255)

                                                cTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAACAAgg                                         >  2:3262283/1‑93 (MQ=255)

                                                 tAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGa                                        <  1:4257511/93‑1 (MQ=255)

                                                 tAATTTCATTTGTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGa                                        <  2:1880261/93‑1 (MQ=255)

                                                   aTTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGAtt                                      >  2:272417/1‑93 (MQ=255)

                                                     ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa                                    <  1:3791308/93‑1 (MQ=255)

                                                     ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa                                    <  1:905378/93‑1 (MQ=255)

                                                     ttCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTaa                                    <  2:1522969/93‑1 (MQ=255)

                                                      tCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAAt                                   <  1:3451446/93‑1 (MQ=255)

                                                       cATTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATc                                  >  2:1252178/1‑93 (MQ=255)

                                                        aTTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATcc                                 >  2:1541577/1‑93 (MQ=255)

                                                        aTTTTTGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATcc                                 >  1:2576451/1‑93 (MQ=255)

                                                          ttttGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTa                               <  1:3293449/93‑1 (MQ=255)

                                                           tttGAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTaa                              >  2:4147559/1‑93 (MQ=255)

                                                              gAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGa                           <  1:1865138/93‑1 (MQ=255)

                                                              gAATTTGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGa                           <  2:321956/93‑1 (MQ=255)

                                                                 tttGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTa                        <  2:236364/93‑1 (MQ=255)

                                                                  ttGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAg                       <  1:3385997/93‑1 (MQ=255)

                                                                   tGGAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAgg                      <  2:3030885/93‑1 (MQ=255)

                                                                    ggAGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGt                     <  1:2881628/93‑1 (MQ=255)

                                                                      aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa                   <  2:1508906/93‑1 (MQ=255)

                                                                      aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa                   <  2:1110988/93‑1 (MQ=255)

                                                                      aGTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGa                   <  2:4218276/93‑1 (MQ=255)

                                                                       gTCCGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGaa                  <  1:4565208/93‑1 (MQ=255)

                                                                         ccGGGTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAAt                <  1:620598/93‑1 (MQ=255)

                                                                           gggTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATaa              <  1:1592675/93‑1 (MQ=255)

                                                                           gggTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATaa              <  1:3506264/93‑1 (MQ=255)

                                                                             gTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAaca            >  2:3373832/1‑93 (MQ=255)

                                                                             gTCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAaca            <  1:3337249/93‑1 (MQ=255)

                                                                              tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac           >  1:1384923/1‑93 (MQ=255)

                                                                              tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac           <  1:1075175/93‑1 (MQ=255)

                                                                              tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac           >  2:2450613/1‑93 (MQ=255)

                                                                              tCATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAacac           <  2:1353953/93‑1 (MQ=255)

                                                                               cATGATGTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAAcaca          <  1:2359051/93‑1 (MQ=255)

                                                                                atgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaa         >  1:2657852/1‑93 (MQ=255)

                                                                                atgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaa         >  2:1347847/1‑93 (MQ=255)

                                                                                 tgatgTATAGCTATTTCCTGACCAGACCAACCTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa        <  1:1482730/93‑1 (MQ=255)

                                                                                 tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa        >  1:945186/1‑93 (MQ=255)

                                                                                 tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa        <  1:3630955/93‑1 (MQ=255)

                                                                                 tgatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaa        >  2:1669314/1‑93 (MQ=255)

                                                                                  gatgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACaaaa       <  1:2702801/93‑1 (MQ=255)

                                                                                   atgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAg      >  2:2280674/1‑93 (MQ=255)

                                                                                    tgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGt     <  1:822999/93‑1 (MQ=255)

                                                                                    tgTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGt     <  2:761537/93‑1 (MQ=255)

                                                                                     gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt    >  2:1770845/1‑93 (MQ=255)

                                                                                     gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt    >  1:554522/1‑93 (MQ=255)

                                                                                     gTATAGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGtt    <  2:316388/93‑1 (MQ=255)

                                                                                      tataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGttt   >  1:3891963/1‑93 (MQ=255)

                                                                                      tataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGttt   <  1:4594014/93‑1 (MQ=255)

                                                                                       ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTGACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc  >  1:2509779/1‑93 (MQ=255)

                                                                                       ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc  <  2:4402246/93‑1 (MQ=255)

                                                                                       ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc  >  2:1786694/1‑93 (MQ=255)

                                                                                       ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc  >  1:201454/1‑93 (MQ=255)

                                                                                       ataGCTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTc  >  2:864090/1‑93 (MQ=255)

GGTACAGGCAAATAGCCCGATCTTCTTGGCAGAACTCATGCTCTTCTCCTAATTTCATTTTTGAATTTGGAGTCCGGGTCATGATGTATAACTATTTCCTGACCAGACCAAACTGGCGATAAGATTACTCACGAAAAAAGGATTAATCCTAAAGATTAGGTGAAATAACACAAAAGTTTC  >  NC_000913/4357571‑4357750

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`