BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,428,292	T→C	V284A (GTT→GCT)	cycA →	transport of D‑alanine, D‑serine, and glycine

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,428,292	0	T	C	100.0%	672.6 / NA	208	V284A (GTT→GCT)	cycA	transport of D‑alanine, D‑serine, and glycine
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (111/97); total (111/97)

Only 100 of 215 total aligned reads displayed.

TCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG  >  NC_000913/4428202‑4428381

tCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTttgctg                                                                                         >  1:4649560/1‑93 (MQ=255)

tCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTttgctg                                                                                         >  2:2711733/1‑93 (MQ=255)

 ccGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGa                                                                                        <  1:1264607/93‑1 (MQ=255)

  cGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGaa                                                                                       >  1:4114922/1‑93 (MQ=255)

   gTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAc                                                                                      >  1:2190449/1‑93 (MQ=255)

    tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt                                                                                     <  1:4381980/93‑1 (MQ=255)

    tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt                                                                                     >  2:4663855/1‑93 (MQ=255)

    tATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACt                                                                                     <  2:1822418/93‑1 (MQ=255)

     aTCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTg                                                                                    >  2:2176458/1‑93 (MQ=255)

     aTCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTg                                                                                    >  2:2698819/1‑93 (MQ=255)

      tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt                                                                                   <  1:3276346/93‑1 (MQ=255)

      tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt                                                                                   >  1:1339766/1‑93 (MQ=255)

      tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt                                                                                   >  1:344627/1‑93 (MQ=255)

      tCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGt                                                                                   >  2:4345725/1‑93 (MQ=255)

       cATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGtt                                                                                  <  2:1765887/93‑1 (MQ=255)

          tATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCgt                                                                               >  2:1248798/1‑93 (MQ=255)

          tATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCgt                                                                               >  2:2556552/1‑93 (MQ=255)

             gTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGtt                                                                            <  2:3490378/93‑1 (MQ=255)

             gTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGtt                                                                            <  1:3996386/93‑1 (MQ=255)

              ttCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTg                                                                           <  1:3864156/93‑1 (MQ=255)

                  aCGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAg                                                                       >  1:210180/1‑93 (MQ=255)

                  aCGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAg                                                                       <  2:608734/93‑1 (MQ=255)

                   cGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAgg                                                                      >  1:1888468/1‑93 (MQ=255)

                    gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg                                                                     >  2:3573926/1‑93 (MQ=255)

                    gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg                                                                     >  1:3378024/1‑93 (MQ=255)

                    gTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAggg                                                                     >  2:2516979/1‑93 (MQ=255)

                      cTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGct                                                                   >  1:1404399/1‑93 (MQ=255)

                        tCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgc                                                                 >  1:519354/1‑93 (MQ=255)

                          gcgcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcct                                                               <  2:2078735/93‑1 (MQ=255)

                           cgcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGAGctgcctg                                                              <  2:4557079/93‑1 (MQ=255)

                            gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcctgc                                                             >  1:2573355/1‑93 (MQ=255)

                            gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGctgcctgc                                                             >  2:4151459/1‑93 (MQ=255)

                            gcTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGCTTGCTGAACTGTTCGTGTTGGTAGGGctggctgc                                                             >  1:4195294/1‑93 (MQ=255)

                             cTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgct                                                            <  2:837496/93‑1 (MQ=255)

                              tGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg                                                           >  2:1871374/1‑93 (MQ=255)

                              tGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg                                                           >  2:814513/1‑93 (MQ=255)

                              ggATTGTGATTATGTCCGTGACGCCGGGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCctgctg                                                           <  2:553768/92‑1 (MQ=255)

                               gATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCtgctgc                                                          >  1:309761/1‑93 (MQ=255)

                                aTTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGcc                                                         >  1:3646686/1‑93 (MQ=255)

                                aTTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGcc                                                         >  1:707352/1‑93 (MQ=255)

                                 ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg                                                        >  2:2149423/1‑93 (MQ=255)

                                 ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg                                                        >  1:2736346/1‑93 (MQ=255)

                                 ttGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCg                                                        >  1:748563/1‑93 (MQ=255)

                                    tgATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCaa                                                     <  1:1419995/93‑1 (MQ=255)

                                    tgATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCaa                                                     <  2:1043424/93‑1 (MQ=255)

                                     gATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAg                                                    >  1:10353/1‑93 (MQ=255)

                                     gATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAg                                                    <  1:4492227/93‑1 (MQ=255)

                                      aTTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGc                                                   <  2:4006219/93‑1 (MQ=255)

                                       ttATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCg                                                  <  1:2197883/93‑1 (MQ=255)

                                       ttATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCg                                                  >  1:3783613/1‑93 (MQ=255)

                                        tATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGt                                                 <  1:2961760/93‑1 (MQ=255)

                                         aTGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTg                                                <  1:838279/93‑1 (MQ=255)

                                         aTGCCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTg                                                <  2:3553904/93‑1 (MQ=255)

                                           gTCCGTGACGCCGTGGAGTTCGGTAGTCCAGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGAt                                              <  2:1674639/93‑1 (MQ=255)

                                            tCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATc                                             >  1:1184735/1‑93 (MQ=255)

                                             ccGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCa                                            >  1:2713068/1‑93 (MQ=255)

                                             ccGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAAATGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCa                                            <  1:2510485/93‑1 (MQ=255)

                                              cGTGCCGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCGGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa                                           <  2:2321285/93‑1 (MQ=255)

                                              cGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa                                           >  1:840658/1‑93 (MQ=255)

                                              cGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCaa                                           <  1:306830/93‑1 (MQ=255)

                                                tGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACt                                         <  2:633610/93‑1 (MQ=255)

                                                  aCGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACttt                                       >  2:1173666/1‑93 (MQ=255)

                                                  aCGCCGTGGAGTGCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACttt                                       <  2:753378/93‑1 (MQ=255)

                                                   cGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtg                                      <  2:1907784/93‑1 (MQ=255)

                                                    gCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgt                                     >  2:3974880/1‑93 (MQ=255)

                                                     ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg                                    <  1:3360782/93‑1 (MQ=255)

                                                     ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg                                    <  1:1774140/93‑1 (MQ=255)

                                                     ccGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTtgtg                                    >  2:3271494/1‑93 (MQ=255)

                                                       gTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTgtggt                                  >  2:3068976/1‑93 (MQ=255)

                                                       gTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTgtggt                                  <  2:2767918/93‑1 (MQ=255)

                                                         ggAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGc                                <  1:3611831/93‑1 (MQ=255)

                                                         ggAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGc                                >  2:359481/1‑93 (MQ=255)

                                                          gAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCt                               >  2:460438/1‑93 (MQ=255)

                                                           aGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTg                              <  1:3584245/93‑1 (MQ=255)

                                                            gTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGa                             <  1:3509114/93‑1 (MQ=255)

                                                            gTTCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGa                             >  2:3862667/1‑93 (MQ=255)

                                                              tCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGAcc                           >  2:2893221/1‑93 (MQ=255)

                                                              tCGGTAGTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGAcc                           <  2:221720/93‑1 (MQ=255)

                                                                    gTCCCGGAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTgcg                     >  1:2021629/1‑93 (MQ=255)

                                                                         ggAGAAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTc                <  1:4236127/93‑1 (MQ=255)

                                                                          gagaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCt               <  1:2453100/93‑1 (MQ=255)

                                                                          gagaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACGTTGTGGTGCTGACCTCTGCGGCGTCt               >  1:1015211/1‑93 (MQ=255)

                                                                            ggaaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTc             >  2:4616015/3‑93 (MQ=255)

                                                                            gaAAAGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTc             >  2:394662/1‑93 (MQ=255)

                                                                             aaaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTcc            <  2:2978127/93‑1 (MQ=255)

                                                                              aaaGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCg           >  1:931504/1‑93 (MQ=255)

                                                                                aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCt         >  1:2639530/1‑93 (MQ=255)

                                                                                aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCt         >  2:65985/1‑93 (MQ=255)

                                                                                aGCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGATGCTGACCTCTGCGGCGTCTTCCGCt         >  2:3795167/1‑93 (MQ=255)

                                                                                 gCCCGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTa        <  1:645125/93‑1 (MQ=255)

                                                                                  cccGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTaa       <  2:1621485/93‑1 (MQ=255)

                                                                                    cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa     >  1:2880886/1‑93 (MQ=255)

                                                                                    cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa     <  1:2319861/93‑1 (MQ=255)

                                                                                    cGTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACa     >  1:9177/1‑93 (MQ=255)

                                                                                     gTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTTACAg    >  2:4428461/1‑93 (MQ=255)

                                                                                     gTTTGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAg    >  2:3349493/1‑93 (MQ=255)

                                                                                      tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc   <  1:148720/93‑1 (MQ=255)

                                                                                      tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc   >  2:4192153/1‑93 (MQ=255)

                                                                                      tttGCTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgc   <  1:3035808/93‑1 (MQ=255)

                                                                                       ttgctgAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAgcg  <  2:28471/93‑1 (MQ=255)

TCCGTATCATTATGTTCTACGTCTTCGCGCTGATTGTGATTATGTCCGTGACGCCGTGGAGTTCGGTAGTCCCGGAGAAAAGCCCGTTTGTTGAACTGTTCGTGTTGGTAGGGCTGCCTGCTGCCGCAAGCGTGATCAACTTTGTGGTGCTGACCTCTGCGGCGTCTTCCGCTAACAGCG  >  NC_000913/4428202‑4428381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`