BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,444,690	T→C	V1001A (GTA→GCA)	ytfN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,444,690	0	T	C	100.0%	657.1 / NA	209	V1001A (GTA→GCA)	ytfN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (106/103); total (106/103)

Only 100 of 224 total aligned reads displayed.

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag                                                                                         <  2:2718578/93‑1 (MQ=255)

tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag                                                                                         <  1:61380/93‑1 (MQ=255)

 cGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAgg                                                                                        <  2:1654079/93‑1 (MQ=255)

  gAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGc                                                                                       <  1:3261390/93‑1 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  1:873833/1‑93 (MQ=255)

    ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt                                                                                     <  1:1895660/93‑1 (MQ=255)

    ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt                                                                                     >  1:3026984/1‑93 (MQ=255)

      cTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtct                                                                                   <  2:1776662/93‑1 (MQ=255)

      cTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtct                                                                                   >  1:4161209/1‑93 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  >  1:3399888/1‑93 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  1:3716289/1‑93 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 <  1:2997718/93‑1 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 <  1:486562/93‑1 (MQ=255)

          acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               <  1:2571929/93‑1 (MQ=255)

          acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               <  1:469906/93‑1 (MQ=255)

          acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               >  2:3981037/1‑93 (MQ=255)

             aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa                                                                            <  2:2355048/93‑1 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           <  1:2804342/93‑1 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           >  2:2529638/1‑93 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGCGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           >  1:2351785/1‑93 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:1183947/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  1:3827451/93‑1 (MQ=255)

                ccTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgt                                                                         <  2:313247/93‑1 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgtg                                                                        >  2:2584842/1‑93 (MQ=255)

                 cTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtgcg                                                                        >  2:2250149/1‑91 (MQ=255)

                  tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg                                                                       <  1:3851126/93‑1 (MQ=255)

                  tGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtgg                                                                       >  1:4424900/1‑93 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  2:4316814/1‑93 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      <  2:2886010/93‑1 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  1:3134196/1‑93 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      <  2:2928775/93‑1 (MQ=255)

                     ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  2:1246895/93‑1 (MQ=255)

                      tACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAt                                                                   <  2:3209650/93‑1 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  1:3339164/1‑93 (MQ=255)

                        cccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGc                                                                 <  1:975893/93‑1 (MQ=255)

                         ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt                                                                <  2:4532125/93‑1 (MQ=255)

                         ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt                                                                >  1:20072/1‑93 (MQ=255)

                          cTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCtt                                                               >  2:4549347/1‑93 (MQ=255)

                           tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGGGATGCTTa                                                              >  2:389667/1‑93 (MQ=255)

                              aTGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACg                                                           >  1:3203756/1‑93 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          >  2:493582/1‑93 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          <  1:4074084/93‑1 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          >  1:934856/1‑93 (MQ=255)

                                ggTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGAt                                                         <  2:1412869/93‑1 (MQ=255)

                                 gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa                                                        >  1:4470928/1‑93 (MQ=255)

                                 gTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATa                                                        >  1:683243/1‑93 (MQ=255)

                                  tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa                                                       >  1:3471684/1‑93 (MQ=255)

                                   cgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAc                                                      <  2:106879/93‑1 (MQ=255)

                                   cgcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAc                                                      <  1:649247/93‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATCAcc                                                     >  2:1872401/1‑93 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:3620023/93‑1 (MQ=255)

                                      gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg                                                   <  2:549674/93‑1 (MQ=255)

                                       tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc                                                  <  1:4500171/93‑1 (MQ=255)

                                         gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa                                                <  2:4286153/93‑1 (MQ=255)

                                         gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa                                                <  2:4122536/93‑1 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              >  2:3118392/1‑93 (MQ=255)

                                            gTCCCTTGGGCGCGCATCGTGGTGGACGATCTGGCGGCAAGGGCAGCAGGCGTCTCCAGCGATGCGGTGATGCTTGACGATAACCTGCAACCg                                             >  2:3939916/1‑93 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          <  1:1101955/93‑1 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          >  2:691991/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  2:2412288/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  2:2173434/1‑93 (MQ=255)

                                                 ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga                                        <  1:1146458/93‑1 (MQ=255)

                                                 ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga                                        >  1:62374/1‑93 (MQ=255)

                                                  tGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAagag                                       <  1:1158856/93‑1 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      >  2:2079626/1‑93 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      <  2:1491413/93‑1 (MQ=255)

                                                    ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc                                     >  1:4570326/1‑93 (MQ=255)

                                                        cgcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaa                                 <  1:4088532/93‑1 (MQ=255)

                                                         gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa                                >  2:344541/1‑93 (MQ=255)

                                                         gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa                                <  1:4287929/93‑1 (MQ=255)

                                                           aTCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACg                              >  2:3578601/1‑93 (MQ=255)

                                                              gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg                           >  2:2228509/1‑93 (MQ=255)

                                                              gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg                           >  2:2481522/1‑93 (MQ=255)

                                                              gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg                           >  2:3349586/1‑93 (MQ=255)

                                                               tggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGt                          >  2:3258180/1‑93 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGATCCGAAAACGGCGTCGa                       <  2:3095283/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  2:2544424/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  1:178950/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      <  2:1259702/93‑1 (MQ=255)

                                                                    cACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt                     <  1:2421729/93‑1 (MQ=255)

                                                                     aCGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTc                    >  2:1164753/1‑93 (MQ=255)

                                                                       gATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCg                  <  2:789695/93‑1 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATACCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGa                 <  2:417635/93‑1 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                <  1:4050085/93‑1 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                <  2:3405126/93‑1 (MQ=255)

                                                                         tCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAt                >  1:2768596/1‑93 (MQ=255)

                                                                          cTGCCGGACAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATACCCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt               <  1:3534289/93‑1 (MQ=255)

                                                                            gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa             >  2:2004409/1‑93 (MQ=255)

                                                                             ccGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAAc            <  1:2317075/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  1:1360469/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           >  1:798063/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          >  1:2624349/1‑93 (MQ=255)

                                                                               ggAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAg          >  2:4604514/1‑93 (MQ=255)

                                                                                gAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGt         <  1:491227/93‑1 (MQ=255)

                                                                                  aaGCGCAGCAGCCGTCTCCATCTATGTGGTGATGCTGAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa       <  1:1529152/93‑1 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  1:2383676/1‑93 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      >  2:1460184/1‑93 (MQ=255)

                                                                                      gcagcaGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTg   >  1:1935207/1‑93 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  2:4424900/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  2:835829/93‑1 (MQ=255)

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`