Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,502,350 A→G Y242C (TAC→TGC)  b4279 → putative transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,502,3500AG99.4% 570.1 / NA 178Y242C (TAC→TGC) b4279putative transport protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (74/103);  minor base T (0/1);  total (74/104)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 180 total aligned reads displayed.

ACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATATTTTTTG  >  NC_000913/4502261‑4502439
                                                                                          |                                                                                         
aCCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGcc                                                                                         >  2:2658479/1‑93 (MQ=255)
 ccACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCt                                                                                        <  1:1128291/93‑1 (MQ=255)
 ccACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCt                                                                                        >  1:1253354/1‑93 (MQ=255)
 ccACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCt                                                                                        >  1:276721/1‑93 (MQ=255)
  cacaTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTcctgcctg                                                                                       >  1:1378264/1‑93 (MQ=255)
    caTCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGc                                                                                     >  1:535350/1‑93 (MQ=255)
      tCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAg                                                                                   <  2:1641527/93‑1 (MQ=255)
      tCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAg                                                                                   >  1:1990501/1‑93 (MQ=255)
       cTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGa                                                                                  <  1:775963/93‑1 (MQ=255)
           cAATCTCTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAAt                                                                              <  2:2943301/93‑1 (MQ=255)
            aaTCTATATGATCCTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATg                                                                             <  2:2513207/93‑1 (MQ=255)
              tctcTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGa                                                                           <  1:1561801/93‑1 (MQ=255)
              tctcTATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGa                                                                           <  2:1083529/93‑1 (MQ=255)
               ctctATGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAg                                                                          >  2:106903/1‑93 (MQ=255)
                   aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTaa                                                                      <  2:4483423/93‑1 (MQ=255)
                   aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTaa                                                                      <  2:2034222/93‑1 (MQ=255)
                   aTGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTaa                                                                      >  1:2855173/1‑93 (MQ=255)
                   aTGAGCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTaa                                                                      <  1:3385272/93‑1 (MQ=255)
                    tGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAAt                                                                     <  1:471107/93‑1 (MQ=255)
                    tGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAAt                                                                     >  2:3001400/1‑93 (MQ=255)
                    tGATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAAt                                                                     >  2:3163235/1‑93 (MQ=255)
                     gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATa                                                                    <  2:3509771/93‑1 (MQ=255)
                     gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATa                                                                    <  2:343452/93‑1 (MQ=255)
                     gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATa                                                                    <  1:3257346/93‑1 (MQ=255)
                     gATCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATa                                                                    >  1:2134895/1‑93 (MQ=255)
                      aTCGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATAc                                                                   >  1:4641741/1‑93 (MQ=255)
                        cGTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAg                                                                 >  2:4200400/1‑93 (MQ=255)
                         gTTTTCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGt                                                                <  2:57764/93‑1 (MQ=255)
                          ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTg                                                               <  2:3710187/93‑1 (MQ=255)
                          ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTg                                                               >  1:1379359/1‑93 (MQ=255)
                          ttttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTg                                                               <  2:3507928/93‑1 (MQ=255)
                           tttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTgg                                                              <  2:2867010/93‑1 (MQ=255)
                           tttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTgg                                                              <  1:4446192/93‑1 (MQ=255)
                            ttCCTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGt                                                             <  1:2279059/93‑1 (MQ=255)
                              ccTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCa                                                           <  1:2396953/93‑1 (MQ=255)
                               cTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCAt                                                          <  2:2282244/93‑1 (MQ=255)
                               cTCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCAt                                                          >  1:2912933/1‑93 (MQ=255)
                                tCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCAtt                                                         <  2:1683191/93‑1 (MQ=255)
                                tCGTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCAtt                                                         <  2:638037/93‑1 (MQ=255)
                                  gTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTc                                                       >  2:494019/1‑93 (MQ=255)
                                  gTCTGTTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTc                                                       <  1:3515807/93‑1 (MQ=255)
                                    ctgttttttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCaa                                                     <  1:1776488/89‑1 (MQ=255)
                                       ttttttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAActc                                                  <  1:1688209/92‑1 (MQ=255)
                                       ttttttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAActc                                                  >  2:3231553/2‑93 (MQ=255)
                                          tttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtga                                               >  1:3406299/1‑93 (MQ=255)
                                          tttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtga                                               <  2:3975600/93‑1 (MQ=255)
                                          tttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtga                                               >  2:1412516/1‑93 (MQ=255)
                                           ttGTCTATTTGGTGGAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtgat                                              <  1:2989460/93‑1 (MQ=255)
                                           ttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtgat                                              <  1:65468/93‑1 (MQ=255)
                                           ttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtgat                                              <  1:3799477/93‑1 (MQ=255)
                                           ttGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCtgat                                              <  1:2452021/93‑1 (MQ=255)
                                              tCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGAc                                           >  2:2214056/1‑93 (MQ=255)
                                                tATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACaa                                         <  1:501865/93‑1 (MQ=255)
                                                tATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACaa                                         >  1:613768/1‑93 (MQ=255)
                                                tATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACaa                                         <  2:4114388/93‑1 (MQ=255)
                                                 aTTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAAt                                        <  2:3273432/93‑1 (MQ=255)
                                                  tttGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATa                                       >  1:3866449/1‑93 (MQ=255)
                                                     ggTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCa                                    >  2:912985/1‑93 (MQ=255)
                                                       tGCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAgg                                  <  1:3943765/93‑1 (MQ=255)
                                                        gCAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGt                                 <  1:2038441/93‑1 (MQ=255)
                                                         cAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGtt                                <  2:1867944/93‑1 (MQ=255)
                                                         cAAACTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGtt                                <  2:3851307/93‑1 (MQ=255)
                                                          aaaCTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGttt                               >  2:1655190/1‑93 (MQ=255)
                                                           aaCTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTa                              <  1:2359156/93‑1 (MQ=255)
                                                           aaCTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTa                              <  2:4412159/93‑1 (MQ=255)
                                                            aCTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAg                             <  1:3980099/93‑1 (MQ=255)
                                                            aCTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAg                             <  2:2108873/93‑1 (MQ=255)
                                                             cTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAgg                            >  2:1599973/1‑93 (MQ=255)
                                                             cTGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAgg                            >  2:780603/1‑93 (MQ=255)
                                                              tGGCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGa                           >  1:1363335/1‑93 (MQ=255)
                                                               ggCCGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGaa                          >  2:2465931/1‑93 (MQ=255)
                                                                 ccGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAaca                        <  1:1724142/93‑1 (MQ=255)
                                                                  cGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAacac                       <  1:2818768/93‑1 (MQ=255)
                                                                  cGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAacac                       <  1:435859/93‑1 (MQ=255)
                                                                  cGATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAacac                       <  1:4004283/93‑1 (MQ=255)
                                                                   gATAAACGGACTACTTCCTTCCTTCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACt                      <  1:4552878/93‑1 (MQ=255)
                                                                   gATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACt                      <  2:4385786/93‑1 (MQ=255)
                                                                   gATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACt                      >  1:1153624/1‑93 (MQ=255)
                                                                   gATAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACt                      >  2:189687/1‑93 (MQ=255)
                                                                     tAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGa                    <  2:3925136/93‑1 (MQ=255)
                                                                     tAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGa                    <  1:3602843/93‑1 (MQ=255)
                                                                     tAAACGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGa                    <  1:736267/93‑1 (MQ=255)
                                                                      aaaCGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGAc                   <  1:4587903/93‑1 (MQ=255)
                                                                      aaaCGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGAc                   <  2:2244510/93‑1 (MQ=255)
                                                                        aCGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAg                 >  1:369209/1‑93 (MQ=255)
                                                                        aCGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAg                 >  2:2334278/1‑93 (MQ=255)
                                                                         cGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTTGGAAAAATGACAgg                >  2:4037870/1‑93 (MQ=255)
                                                                         cGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAgg                >  1:1468232/1‑93 (MQ=255)
                                                                         cGGACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAgg                >  2:1575161/1‑93 (MQ=255)
                                                                          ggACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGt               >  1:964/1‑93 (MQ=255)
                                                                           gACTACTTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTa              <  2:460308/93‑1 (MQ=255)
                                                                             ctactTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACa            >  2:1189163/1‑93 (MQ=255)
                                                                              tactTCCTTCCTGCCTGGCAGATAATGGAGTTAATACAGAGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACaa           >  1:3124030/1‑93 (MQ=255)
                                                                                cttccttcCTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAata         <  1:1075233/93‑1 (MQ=255)
                                                                                 ttccttccTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAatat        <  1:991309/93‑1 (MQ=255)
                                                                                 ttccttccTGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAatat        <  2:546746/93‑1 (MQ=255)
                                                                                  tccttcctGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATAtt       <  2:4161876/93‑1 (MQ=255)
                                                                                    cttcctGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATAtttt     <  2:3307102/93‑1 (MQ=255)
                                                                                     ttcctGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATAttttt    >  1:3089406/1‑93 (MQ=255)
                                                                                      tcctGCCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATAtttttt   >  2:2011332/1‑93 (MQ=255)
                                                                                          |                                                                                         
ACCACATCTTTCAATCTCTATGATCGTTTTCCTCGTCTGTTTTTGTCTATTTGGTGCAAACTGGCCGATAAACGGACTACTTCCTTCCTACCTGGCAGATAATGGAGTTAATACAGTGGTCATTTCAACTCTGATGACAATAGCAGGTTTAGGAACACTGACAGGTACAATATTTTTTG  >  NC_000913/4502261‑4502439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: