Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,531,428 C→T intergenic (‑76/‑1155) yjhQ ← / → yjhR hypothetical protein/putative frameshift suppressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,531,4280CT99.0% 735.9 / ‑4.0 210intergenic (‑76/‑1155)yjhQ/yjhRhypothetical protein/putative frameshift suppressor
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base T (95/112);  total (97/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.20e-01

Only 100 of 214 total aligned reads displayed.

GTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTA  >  NC_000913/4531338‑4531516
                                                                                          |                                                                                        
gtggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCa                                                                                        >  2:3934704/1‑93 (MQ=255)
gtggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCa                                                                                        >  2:195176/1‑93 (MQ=255)
  ggtgTACTGTCATAGAACCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAtt                                                                                      <  2:301338/93‑1 (MQ=255)
  ggtgTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCAtt                                                                                      <  1:815893/93‑1 (MQ=255)
     gtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGAc                                                                                   >  1:1070086/1‑93 (MQ=255)
     gtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGAc                                                                                   <  1:423162/93‑1 (MQ=255)
     gtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGAc                                                                                   <  1:3041790/93‑1 (MQ=255)
     gtACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGAc                                                                                   <  1:447820/93‑1 (MQ=255)
       aCTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACgg                                                                                 <  2:1271575/93‑1 (MQ=255)
       aCTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACgg                                                                                 <  1:2414742/93‑1 (MQ=255)
       aCTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACgg                                                                                 >  2:3239158/1‑93 (MQ=255)
        cTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGa                                                                                >  2:3339782/1‑93 (MQ=255)
         tGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGAc                                                                               >  1:3423789/1‑93 (MQ=255)
           tCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACtt                                                                             <  1:2462826/93‑1 (MQ=255)
           tCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACtt                                                                             <  2:3641725/93‑1 (MQ=255)
            cATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTg                                                                            >  1:4519979/1‑93 (MQ=255)
             aTAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGa                                                                           >  1:3827996/1‑93 (MQ=255)
             aTAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGa                                                                           >  2:1437743/1‑93 (MQ=255)
              tAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGAt                                                                          <  1:4330158/93‑1 (MQ=255)
              tAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGAt                                                                          <  1:32202/93‑1 (MQ=255)
              tAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGAt                                                                          >  1:279078/1‑93 (MQ=255)
                gAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATaa                                                                        <  1:3311673/93‑1 (MQ=255)
                 aacctctCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAg                                                                       <  2:1873765/90‑1 (MQ=255)
                 aacctctCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAg                                                                       <  2:1136296/90‑1 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                      >  1:2623768/1‑93 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                      >  2:1333651/1‑93 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                      >  2:1043666/1‑93 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGt                                                                      <  1:3780744/93‑1 (MQ=255)
                  aaCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAAGGCTGGTCATTGACGGACTTGATAAGt                                                                      >  2:4165095/1‑93 (MQ=255)
                   aCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtt                                                                     >  1:4245093/1‑93 (MQ=255)
                   aCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtt                                                                     <  1:3944557/93‑1 (MQ=255)
                   aCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtt                                                                     >  1:3483603/1‑93 (MQ=255)
                   aCTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGtt                                                                     <  1:1872184/93‑1 (MQ=255)
                    ctctCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGttt                                                                    <  2:600716/93‑1 (MQ=255)
                    ctctCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGttt                                                                    <  2:1170898/93‑1 (MQ=255)
                      ctcCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGttttt                                                                  >  1:2721732/1‑93 (MQ=255)
                        ccTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTg                                                                <  2:3737600/93‑1 (MQ=255)
                        ccTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTg                                                                >  1:177001/1‑93 (MQ=255)
                         cTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTgg                                                               >  1:1171538/1‑93 (MQ=255)
                          ttAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGt                                                              <  2:2030213/93‑1 (MQ=255)
                          ttAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGt                                                              <  1:3350013/93‑1 (MQ=255)
                           tAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtt                                                             <  2:2932265/93‑1 (MQ=255)
                           tAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtt                                                             <  2:3463541/93‑1 (MQ=255)
                             gCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGtttt                                                           <  1:2075154/93‑1 (MQ=255)
                              cGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTg                                                          >  2:2965726/1‑93 (MQ=255)
                               gATTATCGAGCTGAGCGCGATCTTTATTCAGCTGGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGa                                                         <  2:639726/93‑1 (MQ=255)
                               gATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTgt                                                         >  1:3148516/1‑92 (MQ=255)
                                aTTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAg                                                        >  2:728586/1‑93 (MQ=255)
                                 ttATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGt                                                       <  2:1583120/93‑1 (MQ=255)
                                   aTCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATGGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttt                                                     <  1:913281/93‑1 (MQ=255)
                                   aTCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttt                                                     <  2:2044498/93‑1 (MQ=255)
                                   aTCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGttt                                                     >  2:1559496/1‑93 (MQ=255)
                                    tCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttt                                                    >  2:4368621/1‑93 (MQ=255)
                                    tCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttt                                                    <  2:4195081/93‑1 (MQ=255)
                                    tCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttt                                                    <  2:1918283/93‑1 (MQ=255)
                                      gAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttttt                                                  <  1:595394/93‑1 (MQ=255)
                                      gAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttttt                                                  <  1:438091/93‑1 (MQ=255)
                                      gAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGtttttt                                                  >  1:393841/1‑93 (MQ=255)
                                        gCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGa                                                >  2:3221541/1‑93 (MQ=255)
                                         cTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGaa                                               <  1:2802185/93‑1 (MQ=255)
                                         cTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGaa                                               <  2:1280140/93‑1 (MQ=255)
                                         cTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGaa                                               <  1:3299062/93‑1 (MQ=255)
                                           gAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGa                                             <  2:2383272/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                            <  1:163467/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                            <  2:3090762/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                            <  1:2359141/93‑1 (MQ=255)
                                            aGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGAc                                            <  2:3493372/93‑1 (MQ=255)
                                             gcgcGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACg                                           <  2:575028/93‑1 (MQ=255)
                                               gcgAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGc                                         >  2:931900/1‑93 (MQ=255)
                                                cgAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCg                                        <  1:1123499/93‑1 (MQ=255)
                                                cgAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCg                                        <  2:2396363/93‑1 (MQ=255)
                                                  aaCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAg                                      >  1:3890951/1‑93 (MQ=255)
                                                  aaCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAg                                      >  1:1504852/1‑93 (MQ=255)
                                                  aaCTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAg                                      >  2:406240/1‑93 (MQ=255)
                                                    cTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCg                                    <  2:2213493/93‑1 (MQ=255)
                                                     tttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGt                                   >  1:13617/1‑93 (MQ=255)
                                                      ttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTg                                  <  2:337992/93‑1 (MQ=255)
                                                      ttATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTg                                  <  1:4075997/93‑1 (MQ=255)
                                                       tATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGc                                 <  2:1805864/93‑1 (MQ=255)
                                                       tATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGc                                 <  2:4468925/93‑1 (MQ=255)
                                                        aTTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCa                                <  2:3830247/93‑1 (MQ=255)
                                                         ttCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAg                               >  2:4595943/1‑93 (MQ=255)
                                                          tCAGCTCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGt                              <  1:3811793/93‑1 (MQ=255)
                                                               tCGGTGGTGTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTc                         <  2:915745/93‑1 (MQ=255)
                                                                   tggtgTTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGgcagca                     >  2:2673010/1‑93 (MQ=255)
                                                                     gtgtTGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAAc                   >  2:1751743/1‑93 (MQ=255)
                                                                        ttGATTCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGc                <  2:1299514/93‑1 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt            >  2:2647370/1‑93 (MQ=255)
                                                                            ttCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCtt            >  2:3161368/1‑93 (MQ=255)
                                                                             tCGATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTc           <  1:2287528/93‑1 (MQ=255)
                                                                               gATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgc         >  1:2497767/1‑93 (MQ=255)
                                                                               gATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgc         <  2:2809920/93‑1 (MQ=255)
                                                                               gATAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgc         >  2:681638/1‑93 (MQ=255)
                                                                                aTAGGGCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTcgcg        >  1:3568539/1‑93 (MQ=255)
                                                                                   gggCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCt     >  1:4054416/1‑93 (MQ=255)
                                                                                    ggCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTg    >  1:2473302/1‑93 (MQ=255)
                                                                                     gCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGt   >  2:2555308/1‑93 (MQ=255)
                                                                                     gCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGt   <  1:975061/93‑1 (MQ=255)
                                                                                     gCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGt   <  1:2101341/93‑1 (MQ=255)
                                                                                     gCTGGTCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGt   >  2:247410/1‑93 (MQ=255)
                                                                                          |                                                                                        
GTGGTGTACTGTCATAGAAACTCTCCTTAGCGATTATCGAGCTGAGCGCGAACTTTATTCAGCTCGGTGGTGTTGATTCGATAGGGCTGGCCATTGACGGACTTGATAAGTTTTTTGGTTTTGAGTTTTTTGAAGACGGCGAGCGTGCAGTCGGTCAGCAACAGCCCTTCGCGGCTGTA  >  NC_000913/4531338‑4531516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: