| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,541,157 | C→T | R159C (CGT→TGT) | fimA → | major type 1 subunit fimbrin |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,541,157 | 0 | C | T | 96.2% | 702.1 / 6.0 | 211 | R159C (CGT→TGT) | fimA | major type 1 subunit fimbrin |
| Reads supporting (aligned to +/- strand): ref base C (5/3); new base T (100/103); total (105/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.44e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
AGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAG > NC_000913/4541067‑4541246 | aGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCgtgt > 1:474409/1‑93 (MQ=255)aGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCgtgt > 2:646577/1‑93 (MQ=255)aGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCgtgt > 1:203899/1‑93 (MQ=255) gAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGtt > 2:798059/1‑93 (MQ=255) gAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGGTCAGAAACAACCCTGAATAACTGAACCAATACCATTCCGTTCCAGTCGTGtt > 1:2406360/1‑93 (MQ=255) aaCGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTa < 2:3090490/93‑1 (MQ=255) cGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTAtt < 1:1280537/93‑1 (MQ=255) gggTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTAttt < 2:3943592/93‑1 (MQ=255) ggTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTAtttt < 1:221163/93‑1 (MQ=255) ctgcGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCaa > 2:2236385/1‑93 (MQ=255) tgcGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAAc > 1:1222898/1‑93 (MQ=255) gcgcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAAcc < 2:3458581/93‑1 (MQ=255) cgcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCg > 2:2942094/1‑93 (MQ=255) gcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCgg < 1:3223277/93‑1 (MQ=255) gcTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCgg < 1:1459904/93‑1 (MQ=255) cTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCggg > 1:1175416/1‑93 (MQ=255) tGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCgggg < 2:4535388/93‑1 (MQ=255) gACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGc < 2:4260893/93‑1 (MQ=255) gACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGc > 1:1845609/1‑93 (MQ=255) cGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCg < 2:1494104/93‑1 (MQ=255) cTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCa > 1:2418038/1‑93 (MQ=255) tGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATGCCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCaa < 1:1356463/93‑1 (MQ=255) tGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCaa > 2:1351045/1‑93 (MQ=255) tGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCaa > 1:876852/1‑93 (MQ=255) ggATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAc > 2:2866211/1‑93 (MQ=255) ggATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAc > 2:4661178/1‑93 (MQ=255) gATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAcc > 1:3405030/1‑93 (MQ=255) gATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAcc < 1:210305/93‑1 (MQ=255) gATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAAcc < 2:2904080/93‑1 (MQ=255) tGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAAcccc < 1:508003/93‑1 (MQ=255) gCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGt < 2:1274119/93‑1 (MQ=255) gACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGtgc < 1:991204/93‑1 (MQ=255) tttAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTgctgct > 1:1823014/1‑93 (MQ=255) gTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCAGGGTGCTGTTAATg > 2:3412874/1‑93 (MQ=255) ttCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGc < 1:2918980/93‑1 (MQ=255) ttCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGc > 2:1079370/1‑93 (MQ=255) cAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCgg > 2:96585/1‑93 (MQ=255) gAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGAt > 2:564519/1‑93 (MQ=255) aacaacCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGc < 2:419935/93‑1 (MQ=255) aacaacCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGc < 1:1674909/93‑1 (MQ=255) acaacCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCg > 2:211873/1‑93 (MQ=255) aacCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGAc > 1:168687/1‑93 (MQ=255) acCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGAcc < 1:2805865/93‑1 (MQ=255) acCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGAcc > 2:1604807/1‑93 (MQ=255) ccTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCtt > 1:3004859/1‑93 (MQ=255) cTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGTTACCGGGGCCGCCACCCCGGGTGCTGCTAATGCGGATGCGACCGTc > 2:2441130/1‑93 (MQ=255) cTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCtta > 2:666817/1‑92 (MQ=255) cTGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTc < 1:2951662/93‑1 (MQ=255) tGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCa < 1:3195187/93‑1 (MQ=255) tGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCa > 1:3731055/1‑93 (MQ=255) tGAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGCGCTGCTAATGCGGATGCGACCTTCa > 2:3688796/1‑93 (MQ=255) gAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCaa > 2:2485177/1‑93 (MQ=255) gAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCaa < 1:1511798/93‑1 (MQ=255) gAATAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCaa < 1:2529009/93‑1 (MQ=255) aaTAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg < 2:1558963/93‑1 (MQ=255) aaTAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAg < 1:4605676/93‑1 (MQ=255) aTAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAgg < 1:4354056/93‑1 (MQ=255) tAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGt > 1:1602326/1‑93 (MQ=255) tAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGt < 2:1152996/93‑1 (MQ=255) tAACGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCAGTGCCGCAACCCCGTGGGCTGCTAATGCGGATGCGAGCTTCCAGGt > 1:58253/1‑93 (MQ=255) aCGGAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTc < 2:2255302/93‑1 (MQ=255) cGGAACCAATACCATGCCGTTCCAGGCGTGGTAGTTTGCAACCGGGGCCGCAGCCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCa < 2:4118170/93‑1 (MQ=255) ggAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAg < 1:3521922/93‑1 (MQ=255) gAACCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGt > 1:1404387/1‑93 (MQ=255) aaCCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTa < 2:477662/93‑1 (MQ=255) aaCCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTa < 1:1122288/93‑1 (MQ=255) aCCAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTAt > 1:4192616/1‑93 (MQ=255) ccAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATc < 2:872026/93‑1 (MQ=255) ccAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATc > 2:4367019/1‑93 (MQ=255) ccAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATc > 1:4155655/1‑93 (MQ=255) cAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCa < 2:1844754/93‑1 (MQ=255) cAATACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCa > 2:4067551/1‑93 (MQ=255) aaTACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCaa < 1:3561342/93‑1 (MQ=255) aaTACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCaa > 1:4115385/1‑93 (MQ=255) aTACCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAAt > 1:1011903/1‑93 (MQ=255) aCCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATaa < 1:1588415/93‑1 (MQ=255) aCCATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATaa < 2:504781/93‑1 (MQ=255) ccATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAAc > 2:2062065/1‑93 (MQ=255) ccATTCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGAATCAATAAc > 1:3988968/1‑93 (MQ=255) ttCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCtt < 1:4424432/93‑2 (MQ=255) ttCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTa < 1:4073810/93‑1 (MQ=255) ttCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTa > 1:4204871/1‑93 (MQ=255) ttCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTa > 1:3891982/1‑93 (MQ=255) tCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCACCCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAc < 2:4004479/93‑1 (MQ=255) tCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAc < 2:515088/93‑1 (MQ=255) tCCGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAc < 2:4547578/93‑1 (MQ=255) cGTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTAccc < 2:2022985/93‑1 (MQ=255) gTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCa > 1:4286857/1‑93 (MQ=255) gTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCa < 1:2649775/93‑1 (MQ=255) gTTCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCa > 1:1452369/1‑93 (MQ=255) tCCAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAgg < 1:556754/93‑1 (MQ=255) cAGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGtt < 2:2670810/93‑1 (MQ=255) aGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTc > 1:2743315/1‑93 (MQ=255) aGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTc > 2:2777228/1‑93 (MQ=255) aGGCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTc > 2:878589/1‑93 (MQ=255) ggCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCa > 2:2956038/1‑93 (MQ=255) ggCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCa > 1:2473804/1‑93 (MQ=255) ggCGTGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCa < 2:3841737/93‑1 (MQ=255) gcgtGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAg > 1:3941908/1‑93 (MQ=255) gcgtGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAg > 1:3069243/1‑93 (MQ=255) | AGAACGGGTGCTGCGCTGACGCTGGATGGTGCGACATTTAGTTCAGAAACAACCCTGAATAACGGAACCAATACCATTCCGTTCCAGGCGCGTTATTTTGCAACCGGGGCCGCAACCCCGGGTGCTGCTAATGCGGATGCGACCTTCAAGGTTCAGTATCAATAACCTACCCAGGTTCAG > NC_000913/4541067‑4541246 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |