BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,560,261	C→T	intergenic (‑17/+51)	yjiJ ← / ← yjiK	putative transport protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,560,261	0	C	T	100.0%	801.7 / NA	219	intergenic (‑17/+51)	yjiJ/yjiK	putative transport protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (104/115); total (104/115)

Only 100 of 226 total aligned reads displayed.

AAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560171‑4560350

aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         <  1:3931903/93‑1 (MQ=255)

aaGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAt                                                                                         >  1:3489071/1‑93 (MQ=255)

 aGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAtt                                                                                        <  2:1947598/93‑1 (MQ=255)

  ggTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTAttt                                                                                       <  2:1074942/93‑1 (MQ=255)

       gAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgtt                                                                                  >  1:2239046/1‑93 (MQ=255)

       gAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTttgtt                                                                                  >  1:4434400/1‑93 (MQ=255)

         aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  1:4519256/93‑1 (MQ=255)

         aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                >  1:2845606/1‑93 (MQ=255)

         aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                >  1:1930980/1‑93 (MQ=255)

         aCCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTtgttgt                                                                                <  2:2961707/93‑1 (MQ=255)

          ccAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTgttgtt                                                                               >  2:4671973/1‑93 (MQ=255)

           cAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTa                                                                              >  2:1809254/1‑93 (MQ=255)

            aGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTaa                                                                             >  2:3666856/1‑93 (MQ=255)

                tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         >  1:424124/1‑93 (MQ=255)

                tCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAg                                                                         <  1:3790485/93‑1 (MQ=255)

                  ccGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGtt                                                                       >  1:4317668/1‑93 (MQ=255)

                    gAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaa                                                                     <  2:4479549/93‑1 (MQ=255)

                    gAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGCGATGCGTGGACGAAGGGATGTTTAACCTTCTTTGTTATTTTTGTTGTTAACAAGTtaa                                                                     >  2:657080/1‑93 (MQ=255)

                    caaaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaa                                                                     <  1:2616600/92‑1 (MQ=255)

                     aaaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaat                                                                    <  1:2036159/93‑1 (MQ=255)

                      aaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaata                                                                   <  1:2999969/93‑1 (MQ=255)

                      aaaGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTtaata                                                                   <  2:3242610/93‑1 (MQ=255)

                        aGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAAc                                                                 <  2:1663730/93‑1 (MQ=255)

                         gcgcGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACa                                                                >  2:406725/1‑93 (MQ=255)

                         gcgcGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACa                                                                <  1:2823418/93‑1 (MQ=255)

                           gcgGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaa                                                              >  1:4070534/1‑93 (MQ=255)

                            cgGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaaa                                                             >  1:140155/1‑93 (MQ=255)

                             ggTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaaaa                                                            <  2:3271341/93‑1 (MQ=255)

                             ggTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACaaaaa                                                            <  2:2025345/93‑1 (MQ=255)

                              gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           >  2:1004232/1‑93 (MQ=255)

                              gTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAg                                                           <  2:3420095/93‑1 (MQ=255)

                               tGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAgg                                                          <  2:2135919/93‑1 (MQ=255)

                                gCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGt                                                         <  1:3106649/93‑1 (MQ=255)

                                 cTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTg                                                        >  2:385836/1‑93 (MQ=255)

                                 cTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTg                                                        <  2:587769/93‑1 (MQ=255)

                                   gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      <  2:4579888/93‑1 (MQ=255)

                                   gaaagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGaa                                                      >  1:231630/1‑93 (MQ=255)

                                     aagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAga                                                    >  1:3243058/1‑92 (MQ=255)

                                     aagaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGc                                                    >  2:2304313/1‑93 (MQ=255)

                                      agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   <  1:4037642/93‑1 (MQ=255)

                                      agaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCa                                                   >  1:710044/1‑93 (MQ=255)

                                       gaaaAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCAt                                                  >  1:1226896/1‑93 (MQ=255)

                                        aaaaGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATg                                                 <  2:3516626/93‑1 (MQ=255)

                                         aaaGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGc                                                >  1:3874839/1‑93 (MQ=255)

                                              gTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGcc                                           >  1:1720788/1‑93 (MQ=255)

                                               ttCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCt                                          <  1:336070/93‑1 (MQ=255)

                                                 cTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGt                                        <  1:4425207/93‑1 (MQ=255)

                                                 cTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGt                                        <  1:2072813/93‑1 (MQ=255)

                                                     gggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAt                                    >  2:4100442/1‑93 (MQ=255)

                                                     gggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAt                                    <  1:3456119/93‑1 (MQ=255)

                                                     gggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAAt                                    <  1:1880270/93‑1 (MQ=255)

                                                      ggATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATg                                   >  2:2773239/1‑93 (MQ=255)

                                                       gATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGc                                  <  2:370639/93‑1 (MQ=255)

                                                       gATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGc                                  <  2:4363778/93‑1 (MQ=255)

                                                       gATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGc                                  <  2:721555/93‑1 (MQ=255)

                                                         tGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCga                                >  1:4072029/1‑93 (MQ=255)

                                                         tGCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCga                                <  2:3976543/93‑1 (MQ=255)

                                                          gCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgat                               <  1:3800110/93‑1 (MQ=255)

                                                          gCGTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgat                               <  2:2262859/93‑1 (MQ=255)

                                                            gTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatga                             <  1:549988/93‑1 (MQ=255)

                                                            gTGGACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCgatga                             <  1:776395/93‑1 (MQ=255)

                                                              ggACGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGAtt                           <  2:1435104/93‑1 (MQ=255)

                                                                aCGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGa                         <  2:2523867/93‑1 (MQ=255)

                                                                 cGAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAg                        <  2:3128093/93‑1 (MQ=255)

                                                                  gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       >  1:2450344/1‑93 (MQ=255)

                                                                  gAAGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgg                       >  2:1107013/1‑93 (MQ=255)

                                                                   aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  2:550453/93‑1 (MQ=255)

                                                                   aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  2:1688902/93‑1 (MQ=255)

                                                                   aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      <  1:4297811/93‑1 (MQ=255)

                                                                   aaGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAggg                      >  2:736891/1‑93 (MQ=255)

                                                                    aGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTTATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgggg                     >  2:2722993/1‑93 (MQ=255)

                                                                    aGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgggg                     >  1:8173/1‑93 (MQ=255)

                                                                    aGGCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAgggg                     >  2:3494525/1‑93 (MQ=255)

                                                                      gCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTa                   >  2:134646/1‑93 (MQ=255)

                                                                      gCATGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTa                   >  1:4567234/1‑93 (MQ=255)

                                                                        aTGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTaaa                 >  2:3777798/1‑93 (MQ=255)

                                                                         tGTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAg                >  2:844443/1‑93 (MQ=255)

                                                                          gTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGc               >  2:1460458/1‑93 (MQ=255)

                                                                          gTTTAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGc               <  2:3577260/93‑1 (MQ=255)

                                                                           tttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCg              >  2:3401948/1‑93 (MQ=255)

                                                                            ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             <  2:761144/93‑1 (MQ=255)

                                                                            ttAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGa             >  1:1763422/1‑93 (MQ=255)

                                                                             tAACCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGAt            <  2:4205442/93‑1 (MQ=255)

                                                                               aCCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaa          >  1:1016849/1‑93 (MQ=255)

                                                                               aCCTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaa          >  1:4204396/1‑93 (MQ=255)

                                                                                ccTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaa         >  2:1564285/1‑93 (MQ=255)

                                                                                 cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        >  1:1357040/1‑93 (MQ=255)

                                                                                 cTTGTTTGTTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaa        >  2:3459852/1‑93 (MQ=255)

                                                                                  ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       <  2:1468830/93‑1 (MQ=255)

                                                                                  ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       >  1:4062556/1‑93 (MQ=255)

                                                                                  ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       <  1:3612761/93‑1 (MQ=255)

                                                                                  ttgtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATaaaaa       <  1:2791611/93‑1 (MQ=255)

                                                                                   tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      <  1:1512772/93‑1 (MQ=255)

                                                                                   tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      <  2:4119594/93‑1 (MQ=255)

                                                                                   tgtttgttATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAAc      <  1:2757840/93‑1 (MQ=255)

                                                                                    gtttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACg     <  2:3221161/93‑1 (MQ=255)

                                                                                     tttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGa    <  2:3313825/93‑1 (MQ=255)

                                                                                      ttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAt   <  2:2420693/93‑1 (MQ=255)

                                                                                      ttgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAt   <  2:3010078/93‑1 (MQ=255)

                                                                                       tgtTATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGAtt  >  1:1267450/1‑93 (MQ=255)

AAGGTCAGAACCAGCATCCCGAAAAGCGCGGTGCTGAAAGAAAAGCGTTCTACGGGATGCGTGGACGAAGGCATGTTTAACCTTGTTTGTCATTTTTGTTGTTAACAAGTTAATAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATT  >  NC_000913/4560171‑4560350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`