BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	531,453	T→C	intergenic (‑8/‑222)	ybbS ← / → ybbT	putative transcriptional regulator LYSR‑type/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	531,453	0	T	C	100.0%	618.4 / NA	193	intergenic (‑8/‑222)	ybbS/ybbT	putative transcriptional regulator LYSR‑type/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (113/80); total (113/80)

Only 100 of 196 total aligned reads displayed.

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542

ttACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCAt                                                                                         >  2:189307/1‑93 (MQ=255)

ttACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCAt                                                                                         >  1:770977/1‑93 (MQ=255)

 tACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATc                                                                                        <  1:4544480/93‑1 (MQ=255)

  aCATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATcc                                                                                       >  2:3878043/1‑93 (MQ=255)

   cATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATccc                                                                                      >  2:2257329/1‑93 (MQ=255)

   cATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATccc                                                                                      <  2:3406755/93‑1 (MQ=255)

     tAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCt                                                                                    >  1:3543411/1‑93 (MQ=255)

      aaTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtt                                                                                   <  2:2516239/93‑1 (MQ=255)

      aaTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtt                                                                                   <  2:2807309/93‑1 (MQ=255)

       aTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCttt                                                                                  >  1:2281237/1‑93 (MQ=255)

       aTCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCttt                                                                                  >  2:4521397/1‑93 (MQ=255)

        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 >  2:1325413/1‑93 (MQ=255)

        tCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCtttt                                                                                 <  1:374538/93‑1 (MQ=255)

         cGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTa                                                                                <  2:3849029/93‑1 (MQ=255)

          gTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaa                                                                               >  1:3417200/1‑93 (MQ=255)

           ttCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              >  2:863203/1‑93 (MQ=255)

           ttCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              <  2:1223062/93‑1 (MQ=255)

           ttCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTaaa                                                                              <  1:3171565/93‑1 (MQ=255)

             cTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCTGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATc                                                                            <  1:1276493/93‑1 (MQ=255)

             cTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATc                                                                            <  1:4452623/93‑1 (MQ=255)

              tGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATcc                                                                           >  1:3874136/1‑93 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                          >  2:3001272/1‑93 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                          <  1:4204660/93‑1 (MQ=255)

               gCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCg                                                                          >  2:1854795/1‑93 (MQ=255)

                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       <  1:1036072/93‑1 (MQ=255)

                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       >  2:4338738/1‑93 (MQ=255)

                  gCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCaa                                                                       >  1:2425075/1‑93 (MQ=255)

                   cTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAg                                                                      >  1:3810601/1‑93 (MQ=255)

                   cTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGCTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAg                                                                      >  2:3018957/1‑93 (MQ=255)

                    ttttGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGt                                                                     >  2:2303043/1‑93 (MQ=255)

                         aaaaaCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGt                                                                <  1:277937/93‑1 (MQ=255)

                             aCTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtt                                                            >  2:1483371/1‑93 (MQ=255)

                              cTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAttt                                                           >  1:2418799/1‑93 (MQ=255)

                              cTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTCCGTGAttt                                                           <  2:4582875/93‑1 (MQ=255)

                               ttCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtttt                                                          >  1:701472/1‑93 (MQ=255)

                               ttCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtttt                                                          >  1:1121528/1‑93 (MQ=255)

                               ttCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGCGAtttt                                                          >  2:4616289/1‑93 (MQ=255)

                               ttCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGCTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGAtttt                                                          >  1:4250350/1‑93 (MQ=255)

                                  cTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCtt                                                       <  1:1091474/93‑1 (MQ=255)

                                  cTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCtt                                                       <  2:4034035/93‑1 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  2:1196614/93‑1 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  1:3076207/93‑1 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  2:3669683/93‑1 (MQ=255)

                                   tGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTa                                                      <  1:4040609/93‑1 (MQ=255)

                                    gTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTAt                                                     >  2:605269/1‑93 (MQ=255)

                                     tttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATc                                                    <  1:3767532/93‑1 (MQ=255)

                                      ttCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATct                                                   >  2:1597748/1‑92 (MQ=255)

                                        cAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctc                                                 <  1:4422075/93‑1 (MQ=255)

                                         aGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCctct                                                <  1:1501269/93‑1 (MQ=255)

                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               >  1:555443/1‑93 (MQ=255)

                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               >  2:4667138/1‑93 (MQ=255)

                                          gCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTg                                               <  2:660053/93‑1 (MQ=255)

                                           cAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGa                                              <  1:3220062/93‑1 (MQ=255)

                                           cAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGa                                              >  1:2111375/1‑93 (MQ=255)

                                             aCCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGAtt                                            >  2:1721650/1‑93 (MQ=255)

                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        <  2:4396290/93‑1 (MQ=255)

                                                 cAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATc                                        >  2:2443917/1‑93 (MQ=255)

                                                  aaTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCa                                       <  1:3031269/93‑1 (MQ=255)

                                                  aaTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCa                                       >  1:2073847/1‑93 (MQ=255)

                                                   aTGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCTGCAAGCTGCGTGATTTTCTTATCCTCTGATTTATCat                                      >  1:3312421/1‑92 (MQ=255)

                                                    tGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGt                                     >  2:4212516/1‑93 (MQ=255)

                                                     gAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTa                                    >  2:1535327/1‑93 (MQ=255)

                                                     gAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTa                                    <  1:4639438/93‑1 (MQ=255)

                                                      aaaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAt                                   >  2:1276190/1‑93 (MQ=255)

                                                      aaaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAt                                   >  1:4326152/1‑93 (MQ=255)

                                                      aaaGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAt                                   <  1:4434283/93‑1 (MQ=255)

                                                         gTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtttt                                >  2:1398777/1‑93 (MQ=255)

                                                         gTCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAtttt                                >  1:644898/1‑93 (MQ=255)

                                                          tCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttttt                               <  1:2636780/93‑1 (MQ=255)

                                                          tCCGCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTAttttt                               <  1:1335363/93‑1 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACa                            <  1:4516963/93‑1 (MQ=255)

                                                             gCAAGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATAAGTATTTTTACa                            >  2:3913364/1‑93 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                         >  1:4025331/1‑93 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                         <  2:3109628/93‑1 (MQ=255)

                                                                aGGTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGa                         <  1:3901032/93‑1 (MQ=255)

                                                                 ggTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGAt                        >  1:2973672/1‑93 (MQ=255)

                                                                  gTTTCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATa                       <  2:1354201/93‑1 (MQ=255)

                                                                   tttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATaa                      <  1:4157505/93‑1 (MQ=255)

                                                                   tttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATaa                      <  1:4596975/93‑1 (MQ=255)

                                                                   gttCTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATaa                      <  1:961674/92‑1 (MQ=255)

                                                                      cTGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAAccc                   <  1:1665120/93‑1 (MQ=255)

                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  >  1:1810279/1‑93 (MQ=255)

                                                                       tGGATCGAACATCTTCAGGCATCCCCTTTTAAAGCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCt                  <  1:2758133/93‑1 (MQ=255)

                                                                        ggATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAGCCCTg                 <  2:4016595/93‑1 (MQ=255)

                                                                         gATCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGt                >  1:1733095/1‑93 (MQ=255)

                                                                          aTCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGtt               >  1:2019655/1‑93 (MQ=255)

                                                                          aTCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGtt               >  2:3056300/1‑93 (MQ=255)

                                                                           tCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTc              >  1:2735408/1‑93 (MQ=255)

                                                                           tCGAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTc              <  1:448658/93‑1 (MQ=255)

                                                                             gAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCaa            >  2:3989979/1‑93 (MQ=255)

                                                                             gAACATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCaa            >  2:3576320/1‑93 (MQ=255)

                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACTCTGTTCAAtt          >  2:3156918/1‑93 (MQ=255)

                                                                               aCATCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAAtt          <  2:2931296/93‑1 (MQ=255)

                                                                                  tCTTCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTtgt       <  1:1953882/93‑1 (MQ=255)

                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     >  1:576409/1‑93 (MQ=255)

                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     >  1:50065/1‑93 (MQ=255)

                                                                                    ttCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTgg     >  2:1801113/1‑93 (MQ=255)

                                                                                     tCAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGa    <  1:1438096/93‑1 (MQ=255)

                                                                                      cAGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGAc   <  1:2214427/93‑1 (MQ=255)

                                                                                       aGGCATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGTACt  >  2:1136269/1‑93 (MQ=255)

TTACATAATCGTTCTGCCGCTTTTGAAAAACTTCCTGTTTCAGCAACCGCAATGAAAGTCCGCAAGGTTTCTGGATCGAACATCTTCAGGTATCCCCTTTTAAATCCGCAAGTTGCGTGATTTTCTTATCCTCTGATTTATCAGTATTTTTACATGATAACCCTGTTCAATTTGTGGACT  >  NC_000913/531363‑531542

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`