| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 563,894 | A→G | intergenic (‑191/‑52) | fimZ ← / → argU | fimbrial Z protein/tRNA‑Arg |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 563,894 | 0 | A | G | 95.8% | 483.8 / 7.9 | 167 | intergenic (‑191/‑52) | fimZ/argU | fimbrial Z protein/tRNA‑Arg |
| Reads supporting (aligned to +/- strand): ref base A (3/4); new base G (83/77); total (86/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.84e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
GTGTGCGTTTGTTTGCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTA > NC_000913/563802‑563983 | gtgtGCGTTTGTTTGCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCa > 1:946959/1‑93 (MQ=255)gtgtGCGTTTGTTTGCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCa < 2:260455/93‑1 (MQ=255) tttgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAggg > 1:72093/1‑93 (MQ=255) tttgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAggg > 1:4330182/1‑93 (MQ=255) tttgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAggg > 1:4494332/1‑93 (MQ=255) ttgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGt > 1:1022985/1‑93 (MQ=255) ttgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGt < 2:3899376/93‑1 (MQ=255) tgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGtt < 1:307988/93‑1 (MQ=255) tgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGtt < 2:71644/93‑1 (MQ=255) tgtttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGtt < 1:1819596/93‑1 (MQ=255) ttgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGAc < 2:3165626/93‑1 (MQ=255) tgCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGAcc < 2:3476786/93‑1 (MQ=255) cGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGta < 2:259167/93‑1 (MQ=255) cGCTATACCGAAATAAATCAGAAAATCAGACGCGATCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGta < 2:2440278/93‑1 (MQ=255) gCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGtat > 2:4605013/1‑93 (MQ=255) cTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGtata > 2:1870987/1‑93 (MQ=255) tataGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATaa > 2:1354627/1‑93 (MQ=255) tataGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATaa > 2:1435531/1‑93 (MQ=255) ataGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAAt < 1:474724/93‑1 (MQ=255) ataGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAAt > 1:4158719/1‑93 (MQ=255) taGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAAtt > 1:3674234/1‑93 (MQ=255) gCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCa > 2:1987488/1‑93 (MQ=255) gCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCa < 2:4097273/93‑1 (MQ=255) gAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCAcc > 1:2288665/1‑92 (MQ=255) ataaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGa < 2:807411/93‑1 (MQ=255) ataaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGa > 1:115458/1‑93 (MQ=255) ataaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGa < 2:2824113/93‑1 (MQ=255) taaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGAt < 2:1083540/93‑1 (MQ=255) taaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGAt < 2:910880/93‑1 (MQ=255) taaatCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGAt > 1:1864638/1‑93 (MQ=255) aaatcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGAtt < 2:481948/93‑1 (MQ=255) aatcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTa < 2:3242715/93‑1 (MQ=255) aatcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTa < 2:3207397/93‑1 (MQ=255) atcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTac < 1:3109580/93‑1 (MQ=255) atcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTac > 1:2442411/1‑93 (MQ=255) atcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTac < 1:3956630/93‑1 (MQ=255) tcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTaca < 2:841737/93‑1 (MQ=255) tcagaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTaca < 1:598622/93‑1 (MQ=255) agaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACAcc > 2:2721453/1‑93 (MQ=255) aaaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCg < 2:4372458/92‑1 (MQ=255) aaaatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGc > 1:2259325/1‑93 (MQ=255) aatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAt > 2:169508/1‑93 (MQ=255) aatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAt < 1:3061134/93‑1 (MQ=255) aatcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAt > 1:664813/1‑93 (MQ=255) atcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAtt < 2:61324/93‑1 (MQ=255) atcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAtt > 1:4574157/1‑93 (MQ=255) atcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCAtt < 1:3137921/93‑1 (MQ=255) tcagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTg > 2:4641017/1‑93 (MQ=255) acagaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTg < 1:1674908/92‑1 (MQ=255) cagaCGCGGTCGTTCGCTTGTGCAGCAACCAGATCAAAATGCATTGACTCGGCAAGGCTTGACCCTATAATTCACGCGATTACTCCGCATTGc < 1:1049106/93‑1 (MQ=255) agaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCg < 1:2049640/93‑1 (MQ=255) agaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCg < 1:2056103/93‑1 (MQ=255) gaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCgg > 1:976748/1‑93 (MQ=255) gaCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCgg > 1:3448252/1‑93 (MQ=255) aCGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGt < 2:2804649/93‑1 (MQ=255) cgcgGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTa < 1:1710768/93‑1 (MQ=255) cgcgGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGGTGACCGTATAATTCACGCGATTACACCGCATTGCGGTa > 2:33090/1‑93 (MQ=255) gTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCaa < 1:3875191/93‑1 (MQ=255) tCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAc > 2:932964/1‑93 (MQ=255) tCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAc < 1:4426622/93‑1 (MQ=255) tCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAc < 1:1588907/93‑1 (MQ=255) tCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAc > 2:3953364/1‑93 (MQ=255) tCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAc < 2:1154422/93‑1 (MQ=255) cGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcg > 2:750608/1‑93 (MQ=255) cGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcg < 1:2718700/93‑1 (MQ=255) gTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcgc > 2:534594/1‑93 (MQ=255) gTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcgc < 1:4212962/93‑1 (MQ=255) gTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcgc < 2:3013768/93‑1 (MQ=255) ttCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAAcgcg > 1:3732143/1‑93 (MQ=255) cACTTGTTCAGCACCCAGATCAAACGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGcc < 2:3817909/93‑1 (MQ=255) cACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGcc > 1:2471507/1‑93 (MQ=255) cACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGcc > 2:2273456/1‑93 (MQ=255) aCTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGccc > 1:2341271/1‑93 (MQ=255) cTTGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCt > 1:3389489/1‑93 (MQ=255) ttGTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCtt > 1:1103072/1‑93 (MQ=255) gTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATATTTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAg > 2:352532/1‑93 (MQ=255) gTTCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAg < 2:2635038/93‑1 (MQ=255) tCAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCt < 2:1880041/93‑1 (MQ=255) cAGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTc < 1:3255430/93‑1 (MQ=255) aGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCa < 1:1238558/93‑1 (MQ=255) aGCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCa < 1:3626319/93‑1 (MQ=255) gCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAg < 2:4024282/93‑1 (MQ=255) gCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAg > 2:4502008/1‑93 (MQ=255) gCAACCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGGATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAg > 1:3211028/1‑93 (MQ=255) aaCCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGtt > 2:3855528/1‑93 (MQ=255) aaCCAGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGtt > 1:2364891/1‑93 (MQ=255) aGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGAt < 2:4083115/93‑1 (MQ=255) aGATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGAt > 2:4534309/1‑93 (MQ=255) gATCAAAATCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATa < 2:1839635/93‑1 (MQ=255) gATCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATa < 1:2138518/93‑1 (MQ=255) tCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATaga > 2:4587003/1‑93 (MQ=255) tCAAAAGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATaga > 1:3646837/1‑93 (MQ=255) aaaGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCa > 2:1828562/1‑93 (MQ=255) aaGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCaa < 2:4221921/93‑1 (MQ=255) aaGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCaa < 1:4558603/93‑1 (MQ=255) aGCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAAc < 1:3539413/93‑1 (MQ=255) gCCATTGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACg > 2:4546556/1‑93 (MQ=255) ttGACTCGGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCt > 1:121230/1‑93 (MQ=255) ggcTCGGCAAGGGTTGACCGTATAATTCACGCGATTACCCCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTc < 2:3269885/91‑1 (MQ=255) cTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTa < 1:3484758/93‑1 (MQ=255) | GTGTGCGTTTGTTTGCCGCTATAGCGAAATAAATCAGAAAATCAGACGCGGTCGTTCACTTGTTCAGCAACCAGATCAAAAGCCATTGACTCAGCAAGGGTTGACCGTATAATTCACGCGATTACACCGCATTGCGGTATCAACGCGCCCTTAGCTCAGTTGGATAGAGCAACGACCTTCTA > NC_000913/563802‑563983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |