BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	571,696	T→C	L3P (CTC→CCC)	ybcN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	571,696	0	T	C	100.0%	608.6 / NA	193	L3P (CTC→CCC)	ybcN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/83); total (110/83)

Only 100 of 200 total aligned reads displayed.

CCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTC  >  NC_000913/571606‑571785

  aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTca                                                                                       <  2:3894423/93‑1 (MQ=255)

  aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTca                                                                                       >  1:1030815/1‑93 (MQ=255)

  aaaCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTca                                                                                       <  2:1866407/93‑1 (MQ=255)

    aCTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTcaca                                                                                     <  1:1464045/93‑1 (MQ=255)

     ctctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACaa                                                                                    >  2:4204472/1‑93 (MQ=255)

     ctctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACaa                                                                                    <  2:1118423/93‑1 (MQ=255)

      tctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAg                                                                                   >  1:2107828/1‑93 (MQ=255)

       ctctTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGa                                                                                  <  2:3109993/93‑1 (MQ=255)

        tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGAc                                                                                 >  1:3647634/1‑93 (MQ=255)

        tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGAc                                                                                 >  2:2089594/1‑93 (MQ=255)

        tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGAc                                                                                 >  1:2129894/1‑93 (MQ=255)

        tcttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGAc                                                                                 >  2:890959/1‑93 (MQ=255)

         cttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACg                                                                                >  2:3875372/1‑93 (MQ=255)

         cctctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACg                                                                                <  2:4643069/91‑1 (MQ=255)

          ttctCCCTTCACAGATGCAGATATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGGGTGAAACCCTCCCAAGACgg                                                                               >  2:2986191/1‑93 (MQ=255)

          ttctCCCTTCACAGATGCAGAAATGCAGCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCAAAAGACgg                                                                               >  2:1131384/1‑93 (MQ=255)

          ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACgg                                                                               <  2:3385096/93‑1 (MQ=255)

          ttctCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACgg                                                                               >  1:521504/1‑93 (MQ=255)

           tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGc                                                                              >  2:2925984/1‑93 (MQ=255)

           tctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGc                                                                              <  1:3166869/93‑1 (MQ=255)

            ctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCa                                                                             <  1:250826/93‑1 (MQ=255)

            ctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCa                                                                             >  1:394341/1‑93 (MQ=255)

            ctcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCa                                                                             <  2:3657219/93‑1 (MQ=255)

             tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCAt                                                                            >  2:1586429/1‑93 (MQ=255)

             tcCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCAt                                                                            >  2:1277113/1‑93 (MQ=255)

              cccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATc                                                                           >  1:2751326/1‑93 (MQ=255)

              cccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGAGGAGGGGTAGCGTGAAACCCTCACAAGACGGCATc                                                                           >  2:1978443/1‑93 (MQ=255)

               ccTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCa                                                                          >  1:773752/1‑93 (MQ=255)

                cTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCaa                                                                         >  2:728885/1‑93 (MQ=255)

                  tCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAAt                                                                       >  1:3889159/1‑93 (MQ=255)

                     caGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTAc                                                                    >  1:2915160/1‑93 (MQ=255)

                      aGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACa                                                                   >  2:3465324/1‑93 (MQ=255)

                       gATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACAt                                                                  >  2:1414193/1‑93 (MQ=255)

                         tGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATcg                                                                <  1:2381943/93‑1 (MQ=255)

                           cAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATcgcg                                                              <  2:2782184/93‑1 (MQ=255)

                             gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGc                                                            <  2:3822628/93‑1 (MQ=255)

                             gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGc                                                            >  2:1273442/1‑93 (MQ=255)

                             gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGc                                                            >  2:4419222/1‑93 (MQ=255)

                             gAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGc                                                            <  1:3085671/93‑1 (MQ=255)

                                aTGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAAc                                                         <  1:4459949/93‑1 (MQ=255)

                                 tGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACt                                                        <  2:510192/93‑1 (MQ=255)

                                   cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTc                                                      <  1:2238025/93‑1 (MQ=255)

                                   cACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTc                                                      <  1:2215363/93‑1 (MQ=255)

                                    aCCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTcc                                                     >  2:434493/1‑92 (MQ=255)

                                    aCCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCa                                                     <  2:4256896/93‑1 (MQ=255)

                                     ccTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAc                                                    >  1:4006328/1‑93 (MQ=255)

                                      cTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAcc                                                   >  2:2386113/1‑93 (MQ=255)

                                      cTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCAcc                                                   >  2:2148843/1‑93 (MQ=255)

                                       tGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCg                                                  >  1:1088505/1‑93 (MQ=255)

                                        gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACTGc                                                 >  2:2279190/1‑93 (MQ=255)

                                        gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGc                                                 >  1:4028178/1‑93 (MQ=255)

                                        gCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGc                                                 >  1:1718664/1‑93 (MQ=255)

                                          aaTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTa                                               <  2:4304634/93‑1 (MQ=255)

                                          aaTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTa                                               >  1:3567314/1‑93 (MQ=255)

                                           aTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAt                                              >  2:3985820/1‑93 (MQ=255)

                                           aTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAt                                              >  1:98515/1‑93 (MQ=255)

                                           aTTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAt                                              >  2:4099386/1‑93 (MQ=255)

                                             tCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcg                                            >  2:1670080/1‑93 (MQ=255)

                                              cTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcgg                                           <  1:914034/93‑1 (MQ=255)

                                               tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt                                          >  2:2421907/1‑93 (MQ=255)

                                               tttGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGAAGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt                                          >  1:655165/1‑93 (MQ=255)

                                               tgtGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTAtcggt                                          <  1:2087320/91‑1 (MQ=255)

                                                    aTCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTGTCGGTCGGCa                                     >  1:701828/1‑93 (MQ=255)

                                                     tCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAg                                    >  2:1760420/1‑93 (MQ=255)

                                                           gTTTGACGTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAg                              <  1:4198882/93‑1 (MQ=255)

                                                            tttGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGc                             >  1:4619387/1‑93 (MQ=255)

                                                            tttGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGc                             >  1:3731137/1‑93 (MQ=255)

                                                             ttGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGcc                            <  1:2057616/93‑1 (MQ=255)

                                                              tGACCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCt                           <  2:2154975/93‑1 (MQ=255)

                                                               gaactctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCtt                          >  1:2298474/4‑93 (MQ=255)

                                                                aCCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTa                         <  1:1902792/93‑1 (MQ=255)

                                                                aCCTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTa                         <  1:4610869/93‑1 (MQ=255)

                                                                 ccTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTAt                        <  1:1948569/93‑1 (MQ=255)

                                                                 ccTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTAt                        <  1:3476141/93‑1 (MQ=255)

                                                                 ccTCTGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGGCGGCAGATCCAGCCTTAt                        >  2:576905/1‑93 (MQ=255)

                                                                  ctctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATc                       >  1:2406514/1‑93 (MQ=255)

                                                                  ctctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGGCGGCAGATCCAGCCTTATc                       >  2:1392381/1‑93 (MQ=255)

                                                                   tctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCt                      >  2:4513394/1‑93 (MQ=255)

                                                                   tctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCt                      >  2:2883339/1‑93 (MQ=255)

                                                                   tctGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCt                      <  1:1677192/93‑1 (MQ=255)

                                                                     tGCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTgg                    <  1:468918/93‑1 (MQ=255)

                                                                      gCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCGCCGCTATCGGTCGGCAGATCCAGCCTTATCTgga                   <  2:2481876/93‑1 (MQ=255)

                                                                      gCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTgga                   <  1:3364834/93‑1 (MQ=255)

                                                                      gCGGAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTgga                   >  1:3020679/1‑93 (MQ=255)

                                                                         gAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggagga                <  2:3447983/93‑1 (MQ=255)

                                                                         gAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggagga                <  1:3385542/93‑1 (MQ=255)

                                                                         gAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggagga                <  1:296404/93‑1 (MQ=255)

                                                                         gAGGGGAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTggagga                <  2:2573213/93‑1 (MQ=255)

                                                                             ggAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGc            <  2:946170/93‑1 (MQ=255)

                                                                             ggAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGc            <  1:3794660/93‑1 (MQ=255)

                                                                             ggAAGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGc            <  2:104297/93‑1 (MQ=255)

                                                                                aGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCaaa         <  1:4254261/93‑1 (MQ=255)

                                                                                aGCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCaaa         <  1:1135445/93‑1 (MQ=255)

                                                                                 gCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAAt        <  2:425297/93‑1 (MQ=255)

                                                                                 gCGTGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAAt        >  1:1767597/1‑93 (MQ=255)

                                                                                    tGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCt     >  1:2415394/1‑93 (MQ=255)

                                                                                    tGAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCt     <  1:4548566/93‑1 (MQ=255)

                                                                                     gAACCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCtt    >  1:1336776/1‑93 (MQ=255)

                                                                                      aaCCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCttt   >  2:269600/1‑93 (MQ=255)

                                                                                       aCCCCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTc  >  2:463283/1‑93 (MQ=255)

CCAAACTCTCTTCTCCCTTCACAGATGCAGAAATGCACCTGCAATTCTTTGCATCTAGCGTTTGACCTCTGCGGAGGGGAAGCGTGAACCTCTCACAAGACGGCATCAAATTACATCGCGGCAACTTCACCGCTATCGGTCGGCAGATCCAGCCTTATCTGGAGGAGGGCAAATGCTTTC  >  NC_000913/571606‑571785

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`